RNA–Protein interactions for RNA: ENST00000583548.1

NUP85-221, Transcript of nucleoporin 85, humanhuman

TSL 5

Gene NUP85, Length 562 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP85-221ENST00000583548 EFNA5P52803 228 aa6.91□□□□□ -1.3
NUP85-221ENST00000583548 PCBP4P57723 403 aaKnown RBP6.91□□□□□ -1.3
NUP85-221ENST00000583548 NLRP12P59046 1061 aa6.91□□□□□ -1.3
NUP85-221ENST00000583548 USP4Q13107 963 aa6.91□□□□□ -1.3
NUP85-221ENST00000583548 UBAP2LQ14157 1087 aaKnown RBP6.91□□□□□ -1.3
NUP85-221ENST00000583548 PPP2R5AQ15172 486 aa6.91□□□□□ -1.3
NUP85-221ENST00000583548 ZNF77Q15935 545 aa6.91□□□□□ -1.3
NUP85-221ENST00000583548 HLA-BQ31612 363 aa6.91□□□□□ -1.3
NUP85-221ENST00000583548 TBC1D25Q3MII6 688 aa6.91□□□□□ -1.3
NUP85-221ENST00000583548 MGAT5BQ3V5L5 792 aa6.91□□□□□ -1.3
NUP85-221ENST00000583548 C4orf17Q53FE4 359 aa6.91□□□□□ -1.3
NUP85-221ENST00000583548 CCDC157Q569K6 752 aa6.91□□□□□ -1.3
NUP85-221ENST00000583548 ARHGAP40Q5TG30 622 aa6.91□□□□□ -1.3
NUP85-221ENST00000583548 OVOS1Q6IE37 1185 aa6.91□□□□□ -1.3
NUP85-221ENST00000583548 XKR5Q6UX68 686 aa6.91□□□□□ -1.3
NUP85-221ENST00000583548 EFCAB13Q8IY85 973 aa6.91□□□□□ -1.3
NUP85-221ENST00000583548 PIP4P2Q8N4L2 257 aa6.91□□□□□ -1.3
NUP85-221ENST00000583548 KIAA1958Q8N8K9 716 aa6.91□□□□□ -1.3
NUP85-221ENST00000583548 ATAD1Q8NBU5 361 aa6.91□□□□□ -1.3
NUP85-221ENST00000583548 OXER1Q8TDS5 423 aa6.91□□□□□ -1.3
NUP85-221ENST00000583548 C2orf15Q8WU43 125 aaKnown RBP6.91□□□□□ -1.3
NUP85-221ENST00000583548 DNASE2BQ8WZ79 361 aa6.91□□□□□ -1.3
NUP85-221ENST00000583548 TTC9Q92623 222 aa6.91□□□□□ -1.3
NUP85-221ENST00000583548 MTMR9Q96QG7 549 aa6.91□□□□□ -1.3
NUP85-221ENST00000583548 SEPT5Q99719 369 aaPredicted RBP6.91□□□□□ -1.3
NUP85-221ENST00000583548 PLSCR2Q9NRY7 297 aa6.91□□□□□ -1.3
NUP85-221ENST00000583548 CALCOCO1Q9P1Z2 691 aa6.91□□□□□ -1.3
NUP85-221ENST00000583548 FTSJ1Q9UET6 329 aa6.91□□□□□ -1.3
NUP85-221ENST00000583548 VAV3Q9UKW4 847 aa6.91□□□□□ -1.3
NUP85-221ENST00000583548 WNT6Q9Y6F9 365 aa6.91□□□□□ -1.3
NUP85-221ENST00000583548 MYO16Q9Y6X6 1858 aa6.9□□□□□ -1.3
NUP85-221ENST00000583548 PTPRDP23468 1912 aa6.9□□□□□ -1.3
NUP85-221ENST00000583548 ATG2BQ96BY7 2078 aa6.9□□□□□ -1.3
NUP85-221ENST00000583548 A0A0A0MRY4 1105 aa6.9□□□□□ -1.3
NUP85-221ENST00000583548 TRAV19A0A0A6YYK7 116 aa6.9□□□□□ -1.3
NUP85-221ENST00000583548 BCAT2O15382 392 aaPredicted RBP6.9□□□□□ -1.3
NUP85-221ENST00000583548 PRPF3O43395 683 aaKnown RBP6.9□□□□□ -1.3
NUP85-221ENST00000583548 PCDHGA12O60330 932 aa6.9□□□□□ -1.3
NUP85-221ENST00000583548 KAT7O95251 611 aa6.9□□□□□ -1.3
NUP85-221ENST00000583548 AFPP02771 609 aaKnown RBP6.9□□□□□ -1.3
NUP85-221ENST00000583548 F11P03951 625 aa6.9□□□□□ -1.3
NUP85-221ENST00000583548 CKMP06732 381 aa6.9□□□□□ -1.3
NUP85-221ENST00000583548 CSH1P0DML2 217 aa6.9□□□□□ -1.3
NUP85-221ENST00000583548 CSH2P0DML3 217 aa6.9□□□□□ -1.3
NUP85-221ENST00000583548 XRCC6P12956 609 aaKnown RBP eCLIP6.9□□□□□ -1.3
NUP85-221ENST00000583548 GCFC2P16383 781 aaKnown RBP6.9□□□□□ -1.3
NUP85-221ENST00000583548 GABRG2P18507 467 aa6.9□□□□□ -1.3
NUP85-221ENST00000583548 ATF6P18850 670 aa6.9□□□□□ -1.3
NUP85-221ENST00000583548 TYMPP19971 482 aa6.9□□□□□ -1.3
NUP85-221ENST00000583548 HSPA4P34932 840 aa6.9□□□□□ -1.3
NUP85-221ENST00000583548 GRIA2P42262 883 aa6.9□□□□□ -1.3
NUP85-221ENST00000583548 NAMPTP43490 491 aa6.9□□□□□ -1.3
NUP85-221ENST00000583548 KIR2DL1P43626 348 aaPredicted RBP6.9□□□□□ -1.3
NUP85-221ENST00000583548 VAC14Q08AM6 782 aa6.9□□□□□ -1.3
NUP85-221ENST00000583548 HDAC1Q13547 482 aaPredicted RBP6.9□□□□□ -1.3
NUP85-221ENST00000583548 SF3A1Q15459 793 aaKnown RBP6.9□□□□□ -1.3
NUP85-221ENST00000583548 ATF7IP2Q5U623 682 aa6.9□□□□□ -1.3
NUP85-221ENST00000583548 EEF1DP3Q658K8 133 aa6.9□□□□□ -1.3
NUP85-221ENST00000583548 TXNDC8Q6A555 127 aa6.9□□□□□ -1.3
NUP85-221ENST00000583548 PADI6Q6TGC4 694 aa6.9□□□□□ -1.3
NUP85-221ENST00000583548 ALKAL1Q6UXT8 129 aa6.9□□□□□ -1.3
NUP85-221ENST00000583548 ERICH1Q86X53 443 aa6.9□□□□□ -1.3
NUP85-221ENST00000583548 TPH2Q8IWU9 490 aa6.9□□□□□ -1.3
NUP85-221ENST00000583548 CACTIN-AS1Q8N1I8 211 aa6.9□□□□□ -1.3
NUP85-221ENST00000583548 CADM4Q8NFZ8 388 aa6.9□□□□□ -1.3
NUP85-221ENST00000583548 DEPTORQ8TB45 409 aa6.9□□□□□ -1.3
NUP85-221ENST00000583548 SPPL2BQ8TCT7 592 aa6.9□□□□□ -1.3
NUP85-221ENST00000583548 DYDC2Q96IM9 177 aa6.9□□□□□ -1.3
NUP85-221ENST00000583548 DRC1Q96MC2 740 aa6.9□□□□□ -1.3
NUP85-221ENST00000583548 YTHDC1Q96MU7 727 aaKnown RBP6.9□□□□□ -1.3
NUP85-221ENST00000583548 ACAP3Q96P50 834 aa6.9□□□□□ -1.3
NUP85-221ENST00000583548 NAP1L4Q99733 375 aaKnown RBP6.9□□□□□ -1.3
NUP85-221ENST00000583548 LPIN3Q9BQK8 851 aa6.9□□□□□ -1.3
NUP85-221ENST00000583548 IL21RQ9HBE5 538 aa6.9□□□□□ -1.3
NUP85-221ENST00000583548 KCNMB3Q9NPA1 279 aa6.9□□□□□ -1.3
NUP85-221ENST00000583548 GPRC5CQ9NQ84 441 aa6.9□□□□□ -1.3
NUP85-221ENST00000583548 SH3GLB2Q9NR46 395 aa6.9□□□□□ -1.3
NUP85-221ENST00000583548 RGL1Q9NZL6 768 aa6.9□□□□□ -1.3
NUP85-221ENST00000583548 CNTN3Q9P232 1028 aa6.9□□□□□ -1.3
NUP85-221ENST00000583548 CYP8B1Q9UNU6 501 aa6.9□□□□□ -1.3
NUP85-221ENST00000583548 WDR3Q9UNX4 943 aaKnown RBP eCLIP6.9□□□□□ -1.3
NUP85-221ENST00000583548 FNDC3AQ9Y2H6 1198 aaKnown RBP6.9□□□□□ -1.3
NUP85-221ENST00000583548 PAXBP1Q9Y5B6 917 aa6.9□□□□□ -1.3
NUP85-221ENST00000583548 RBM8AQ9Y5S9 174 aaKnown RBP6.9□□□□□ -1.3
NUP85-221ENST00000583548 STK36Q9NRP7 1315 aa6.9□□□□□ -1.3
NUP85-221ENST00000583548 PTPN13Q12923 2485 aa6.89□□□□□ -1.31
NUP85-221ENST00000583548 TTLL13PA6NNM8 815 aa6.89□□□□□ -1.31
NUP85-221ENST00000583548 SLC9A3R1O14745 358 aaPredicted RBP6.89□□□□□ -1.31
NUP85-221ENST00000583548 ADAMTS3O15072 1205 aa6.89□□□□□ -1.31
NUP85-221ENST00000583548 DFNA5O60443 496 aa6.89□□□□□ -1.31
NUP85-221ENST00000583548 BRINP1O60477 761 aa6.89□□□□□ -1.31
NUP85-221ENST00000583548 USO1O60763 962 aaKnown RBP6.89□□□□□ -1.31
NUP85-221ENST00000583548 ADAM23O75077 832 aa6.89□□□□□ -1.31
NUP85-221ENST00000583548 RFPL3O75679 317 aa6.89□□□□□ -1.31
NUP85-221ENST00000583548 SOAT2O75908 522 aa6.89□□□□□ -1.31
NUP85-221ENST00000583548 LARGE1O95461 756 aa6.89□□□□□ -1.31
NUP85-221ENST00000583548 HOXB2P14652 356 aa6.89□□□□□ -1.31
NUP85-221ENST00000583548 LIG1P18858 919 aa6.89□□□□□ -1.31
NUP85-221ENST00000583548 CR2P20023 1033 aa6.89□□□□□ -1.31
NUP85-221ENST00000583548 NMT1P30419 496 aaKnown RBP6.89□□□□□ -1.31
Retrieved 100 of 20,778 RNA–protein pairs in 20.7 ms