RNA–Protein interactions for RNA: ENST00000582923.1

PDLIM1P2-201, Transcript of PDZ and LIM domain 1 pseudogene 2, humanhuman

BASIC

Gene PDLIM1P2, Length 607 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM1P2-201ENST00000582923 ZNF606Q8WXB4 792 aa9.65□□□□□ -0.86
PDLIM1P2-201ENST00000582923 TFAP2BQ92481 460 aa9.65□□□□□ -0.86
PDLIM1P2-201ENST00000582923 PPP2R3CQ969Q6 453 aa9.65□□□□□ -0.86
PDLIM1P2-201ENST00000582923 SMARCD1Q96GM5 515 aa9.65□□□□□ -0.86
PDLIM1P2-201ENST00000582923 PCED1BQ96HM7 432 aa9.65□□□□□ -0.86
PDLIM1P2-201ENST00000582923 PKMYT1Q99640 499 aa9.65□□□□□ -0.86
PDLIM1P2-201ENST00000582923 CLSTN3Q9BQT9 956 aa9.65□□□□□ -0.86
PDLIM1P2-201ENST00000582923 B3GNT5Q9BYG0 378 aa9.65□□□□□ -0.86
PDLIM1P2-201ENST00000582923 HAUS4Q9H6D7 363 aa9.65□□□□□ -0.86
PDLIM1P2-201ENST00000582923 RXFP1Q9HBX9 757 aa9.65□□□□□ -0.86
PDLIM1P2-201ENST00000582923 FNIP2Q9P278 1114 aa9.65□□□□□ -0.86
PDLIM1P2-201ENST00000582923 NOCTQ9UK39 431 aaKnown RBP9.65□□□□□ -0.86
PDLIM1P2-201ENST00000582923 TSPAN16Q9UKR8 245 aa9.65□□□□□ -0.86
PDLIM1P2-201ENST00000582923 WDR3Q9UNX4 943 aaKnown RBP eCLIP9.65□□□□□ -0.86
PDLIM1P2-201ENST00000582923 CEP83Q9Y592 693 aa9.65□□□□□ -0.86
PDLIM1P2-201ENST00000582923 BZW2Q9Y6E2 419 aaKnown RBP9.65□□□□□ -0.86
PDLIM1P2-201ENST00000582923 WDR27A2RRH5 827 aa9.64□□□□□ -0.87
PDLIM1P2-201ENST00000582923 MTMR11A4FU01 709 aa9.64□□□□□ -0.87
PDLIM1P2-201ENST00000582923 C2orf71A6NGG8 1288 aa9.64□□□□□ -0.87
PDLIM1P2-201ENST00000582923 CLDN5O00501 218 aa9.64□□□□□ -0.87
PDLIM1P2-201ENST00000582923 SOX1O00570 391 aaPredicted RBP9.64□□□□□ -0.87
PDLIM1P2-201ENST00000582923 AKR1B10O60218 316 aa9.64□□□□□ -0.87
PDLIM1P2-201ENST00000582923 TBC1D4O60343 1298 aa9.64□□□□□ -0.87
PDLIM1P2-201ENST00000582923 AP1G2O75843 785 aa9.64□□□□□ -0.87
PDLIM1P2-201ENST00000582923 MICAL2O94851 1124 aa9.64□□□□□ -0.87
PDLIM1P2-201ENST00000582923 GLUD1P00367 558 aa9.64□□□□□ -0.87
PDLIM1P2-201ENST00000582923 MMEP08473 750 aa9.64□□□□□ -0.87
PDLIM1P2-201ENST00000582923 PLEKP08567 350 aaPredicted RBP9.64□□□□□ -0.87
PDLIM1P2-201ENST00000582923 FAM200BP0CF97 657 aa9.64□□□□□ -0.87
PDLIM1P2-201ENST00000582923 TNFAIP3P21580 790 aa9.64□□□□□ -0.87
PDLIM1P2-201ENST00000582923 HNRNPH3P31942 346 aaKnown RBP9.64□□□□□ -0.87
PDLIM1P2-201ENST00000582923 EIF4A3P38919 411 aaKnown RBP9.64□□□□□ -0.87
PDLIM1P2-201ENST00000582923 BCAT1P54687 386 aa9.64□□□□□ -0.87
PDLIM1P2-201ENST00000582923 SMARCB1Q12824 385 aa9.64□□□□□ -0.87
PDLIM1P2-201ENST00000582923 RAB33AQ14088 237 aa9.64□□□□□ -0.87
PDLIM1P2-201ENST00000582923 MEA1Q16626 185 aa9.64□□□□□ -0.87
PDLIM1P2-201ENST00000582923 PPP1R26Q5T8A7 1209 aaPredicted RBP9.64□□□□□ -0.87
PDLIM1P2-201ENST00000582923 TPGS2Q68CL5 300 aa9.64□□□□□ -0.87
PDLIM1P2-201ENST00000582923 HGSNATQ68CP4 663 aa9.64□□□□□ -0.87
PDLIM1P2-201ENST00000582923 FAM171BQ6P995 826 aa9.64□□□□□ -0.87
PDLIM1P2-201ENST00000582923 WDR59Q6PJI9 974 aa9.64□□□□□ -0.87
PDLIM1P2-201ENST00000582923 LCLAT1Q6UWP7 414 aa9.64□□□□□ -0.87
PDLIM1P2-201ENST00000582923 CYP26C1Q6V0L0 522 aa9.64□□□□□ -0.87
PDLIM1P2-201ENST00000582923 RNF19BQ6ZMZ0 732 aa9.64□□□□□ -0.87
PDLIM1P2-201ENST00000582923 LRRTM3Q86VH5 581 aa9.64□□□□□ -0.87
PDLIM1P2-201ENST00000582923 PALB2Q86YC2 1186 aa9.64□□□□□ -0.87
PDLIM1P2-201ENST00000582923 MRPL43Q8N983 215 aaKnown RBP9.64□□□□□ -0.87
PDLIM1P2-201ENST00000582923 CCDC112Q8NEF3 446 aa9.64□□□□□ -0.87
PDLIM1P2-201ENST00000582923 SPPL2BQ8TCT7 592 aa9.64□□□□□ -0.87
PDLIM1P2-201ENST00000582923 C2orf15Q8WU43 125 aaKnown RBP9.64□□□□□ -0.87
PDLIM1P2-201ENST00000582923 MRPL38Q96DV4 380 aaKnown RBP9.64□□□□□ -0.87
PDLIM1P2-201ENST00000582923 FUBP3Q96I24 572 aaKnown RBP eCLIP9.64□□□□□ -0.87
PDLIM1P2-201ENST00000582923 NOX5Q96PH1 765 aa9.64□□□□□ -0.87
PDLIM1P2-201ENST00000582923 KLHL5Q96PQ7 755 aa9.64□□□□□ -0.87
PDLIM1P2-201ENST00000582923 SEPT5Q99719 369 aaPredicted RBP9.64□□□□□ -0.87
PDLIM1P2-201ENST00000582923 HNRNPABQ99729 332 aaKnown RBP9.64□□□□□ -0.87
PDLIM1P2-201ENST00000582923 BAG1Q99933 345 aaPredicted RBP9.64□□□□□ -0.87
PDLIM1P2-201ENST00000582923 AGPAT1Q99943 283 aa9.64□□□□□ -0.87
PDLIM1P2-201ENST00000582923 ZSWIM1Q9BR11 485 aa9.64□□□□□ -0.87
PDLIM1P2-201ENST00000582923 HNRNPUL1Q9BUJ2 856 aaKnown RBP eCLIP9.64□□□□□ -0.87
PDLIM1P2-201ENST00000582923 RHOBTB2Q9BYZ6 727 aa9.64□□□□□ -0.87
PDLIM1P2-201ENST00000582923 ZNF518BQ9C0D4 1074 aa9.64□□□□□ -0.87
PDLIM1P2-201ENST00000582923 PRDM12Q9H4Q4 367 aa9.64□□□□□ -0.87
PDLIM1P2-201ENST00000582923 TMLHEQ9NVH6 421 aa9.64□□□□□ -0.87
PDLIM1P2-201ENST00000582923 ARHGAP20Q9P2F6 1191 aa9.64□□□□□ -0.87
PDLIM1P2-201ENST00000582923 AFF4Q9UHB7 1163 aaKnown RBP9.64□□□□□ -0.87
PDLIM1P2-201ENST00000582923 IRAK3Q9Y616 596 aa9.64□□□□□ -0.87
PDLIM1P2-201ENST00000582923 ATG2AQ2TAZ0 1938 aa9.64□□□□□ -0.87
PDLIM1P2-201ENST00000582923 FAM170AA1A519 330 aa9.63□□□□□ -0.87
PDLIM1P2-201ENST00000582923 PRRG1O14668 218 aa9.63□□□□□ -0.87
PDLIM1P2-201ENST00000582923 LILRB3O75022 631 aa9.63□□□□□ -0.87
PDLIM1P2-201ENST00000582923 IPO7O95373 1038 aaKnown RBP9.63□□□□□ -0.87
PDLIM1P2-201ENST00000582923 LSM8O95777 96 aaKnown RBP9.63□□□□□ -0.87
PDLIM1P2-201ENST00000582923 SETSIPP0DME0 302 aa9.63□□□□□ -0.87
PDLIM1P2-201ENST00000582923 CHRNB2P17787 502 aa9.63□□□□□ -0.87
PDLIM1P2-201ENST00000582923 BDNFP23560 247 aa9.63□□□□□ -0.87
PDLIM1P2-201ENST00000582923 CYP2F1P24903 491 aa9.63□□□□□ -0.87
PDLIM1P2-201ENST00000582923 ANXA13P27216 316 aa9.63□□□□□ -0.87
PDLIM1P2-201ENST00000582923 ELF1P32519 619 aa9.63□□□□□ -0.87
PDLIM1P2-201ENST00000582923 CDK17Q00537 523 aa9.63□□□□□ -0.87
PDLIM1P2-201ENST00000582923 FMO1Q01740 532 aa9.63□□□□□ -0.87
PDLIM1P2-201ENST00000582923 ADCY1Q08828 1119 aa9.63□□□□□ -0.87
PDLIM1P2-201ENST00000582923 BST2Q10589 180 aaKnown RBP9.63□□□□□ -0.87
PDLIM1P2-201ENST00000582923 CAMK1Q14012 370 aa9.63□□□□□ -0.87
PDLIM1P2-201ENST00000582923 CNGA2Q16280 664 aa9.63□□□□□ -0.87
PDLIM1P2-201ENST00000582923 MGAT5BQ3V5L5 792 aa9.63□□□□□ -0.87
PDLIM1P2-201ENST00000582923 CFAP221Q4G0U5 840 aa9.63□□□□□ -0.87
PDLIM1P2-201ENST00000582923 LIN9Q5TKA1 542 aa9.63□□□□□ -0.87
PDLIM1P2-201ENST00000582923 DENND1BQ6P3S1 775 aa9.63□□□□□ -0.87
PDLIM1P2-201ENST00000582923 ELMSAN1Q6PJG2 1045 aa9.63□□□□□ -0.87
PDLIM1P2-201ENST00000582923 TRIM72Q6ZMU5 477 aa9.63□□□□□ -0.87
PDLIM1P2-201ENST00000582923 ZNF571Q7Z3V5 609 aaPredicted RBP9.63□□□□□ -0.87
PDLIM1P2-201ENST00000582923 TMTC1Q8IUR5 882 aa9.63□□□□□ -0.87
PDLIM1P2-201ENST00000582923 SCN4BQ8IWT1 228 aa9.63□□□□□ -0.87
PDLIM1P2-201ENST00000582923 ATAD1Q8NBU5 361 aa9.63□□□□□ -0.87
PDLIM1P2-201ENST00000582923 TMEM35BQ8NCS4 154 aa9.63□□□□□ -0.87
PDLIM1P2-201ENST00000582923 C1orf131Q8NDD1 294 aaKnown RBP9.63□□□□□ -0.87
PDLIM1P2-201ENST00000582923 ZNF461Q8TAF7 563 aa9.63□□□□□ -0.87
PDLIM1P2-201ENST00000582923 UBA3Q8TBC4 463 aa9.63□□□□□ -0.87
PDLIM1P2-201ENST00000582923 SECISBP2LQ93073 1101 aaKnown RBP9.63□□□□□ -0.87
Retrieved 100 of 20,778 RNA–protein pairs in 21.3 ms