RNA–Protein interactions for RNA: ENST00000582539.5

TRAPPC8-211, Transcript of trafficking protein particle complex 8, humanhuman

TSL 1 (best) BASIC

Gene TRAPPC8, Length 4,391 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC8-211ENST00000582539 RAD51CO43502 376 aa10.63□□□□□ -0.71
TRAPPC8-211ENST00000582539 SRGAP2O75044 1071 aa10.63□□□□□ -0.71
TRAPPC8-211ENST00000582539 CILPO75339 1184 aa10.63□□□□□ -0.71
TRAPPC8-211ENST00000582539 CXCL8P10145 99 aa10.63□□□□□ -0.71
TRAPPC8-211ENST00000582539 YBX3P16989 372 aaKnown RBP eCLIP10.63□□□□□ -0.719e-6■■□□□ 14.2
TRAPPC8-211ENST00000582539 DRP2Q13474 957 aa10.63□□□□□ -0.71
TRAPPC8-211ENST00000582539 GOLGA7BQ2TAP0 167 aa10.63□□□□□ -0.71
TRAPPC8-211ENST00000582539 INTS6LQ5JSJ4 861 aaKnown RBP10.63□□□□□ -0.71
TRAPPC8-211ENST00000582539 JADE1Q6IE81 842 aa10.63□□□□□ -0.71
TRAPPC8-211ENST00000582539 LZTR1Q8N653 840 aa10.63□□□□□ -0.71
TRAPPC8-211ENST00000582539 RASSF4Q9H2L5 321 aa10.63□□□□□ -0.71
TRAPPC8-211ENST00000582539 GDAP2Q9NXN4 497 aa10.63□□□□□ -0.71
TRAPPC8-211ENST00000582539 SGK1O00141 431 aa10.63□□□□□ -0.71
TRAPPC8-211ENST00000582539 TBC1D8O95759 1140 aa10.63□□□□□ -0.71
TRAPPC8-211ENST00000582539 TYMPP19971 482 aa10.63□□□□□ -0.71
TRAPPC8-211ENST00000582539 CXCR5P32302 372 aa10.63□□□□□ -0.71
TRAPPC8-211ENST00000582539 DLG4P78352 724 aa10.63□□□□□ -0.71
TRAPPC8-211ENST00000582539 SP3Q02447 781 aa10.63□□□□□ -0.71
TRAPPC8-211ENST00000582539 GBP7Q8N8V2 638 aaPredicted RBP10.63□□□□□ -0.71
TRAPPC8-211ENST00000582539 SLC20A1Q8WUM9 679 aa10.63□□□□□ -0.71
TRAPPC8-211ENST00000582539 VAT1Q99536 393 aa10.63□□□□□ -0.71
TRAPPC8-211ENST00000582539 UPF3AQ9H1J1 476 aaKnown RBP10.63□□□□□ -0.71
TRAPPC8-211ENST00000582539 PABPC3Q9H361 631 aaKnown RBP10.63□□□□□ -0.71
TRAPPC8-211ENST00000582539 XPNPEP3Q9NQH7 507 aa10.63□□□□□ -0.71
TRAPPC8-211ENST00000582539 ACTL7BQ9Y614 415 aa10.63□□□□□ -0.71
TRAPPC8-211ENST00000582539 ZNF236Q9UL36 1845 aa10.63□□□□□ -0.71
TRAPPC8-211ENST00000582539 MBLAC1A4D2B0 266 aaPredicted RBP10.63□□□□□ -0.71
TRAPPC8-211ENST00000582539 GOLGA8CPA6NN73 597 aa10.63□□□□□ -0.71
TRAPPC8-211ENST00000582539 PDGFRAP16234 1089 aa10.63□□□□□ -0.71
TRAPPC8-211ENST00000582539 SMPD1P17405 629 aa10.63□□□□□ -0.71
TRAPPC8-211ENST00000582539 NR1D1P20393 614 aa10.63□□□□□ -0.71
TRAPPC8-211ENST00000582539 CST5P28325 142 aaPredicted RBP10.63□□□□□ -0.71
TRAPPC8-211ENST00000582539 ZNF143P52747 638 aaPredicted RBP10.63□□□□□ -0.71
TRAPPC8-211ENST00000582539 DARS2Q6PI48 645 aaKnown RBP10.63□□□□□ -0.71
TRAPPC8-211ENST00000582539 SPOCD1Q6ZMY3 1216 aa10.63□□□□□ -0.71
TRAPPC8-211ENST00000582539 ADGRF2Q8IZF7 708 aa10.63□□□□□ -0.71
TRAPPC8-211ENST00000582539 ANKRD52Q8NB46 1076 aa10.63□□□□□ -0.71
TRAPPC8-211ENST00000582539 RNF139Q8WU17 664 aa10.63□□□□□ -0.71
TRAPPC8-211ENST00000582539 RNF34Q969K3 372 aa10.63□□□□□ -0.71
TRAPPC8-211ENST00000582539 MS4A4AQ96JQ5 239 aa10.63□□□□□ -0.71
TRAPPC8-211ENST00000582539 LPXNO60711 386 aa10.62□□□□□ -0.71
TRAPPC8-211ENST00000582539 EOMESO95936 686 aa10.62□□□□□ -0.71
TRAPPC8-211ENST00000582539 CNTFP26441 200 aa10.62□□□□□ -0.71
TRAPPC8-211ENST00000582539 PTPN9P43378 593 aa10.62□□□□□ -0.71
TRAPPC8-211ENST00000582539 TM4SF4P48230 202 aa10.62□□□□□ -0.71
TRAPPC8-211ENST00000582539 PSEN1P49768 467 aa10.62□□□□□ -0.71
TRAPPC8-211ENST00000582539 PLTPP55058 493 aa10.62□□□□□ -0.71
TRAPPC8-211ENST00000582539 BCAR1P56945 870 aa10.62□□□□□ -0.71
TRAPPC8-211ENST00000582539 OSTNP61366 133 aa10.62□□□□□ -0.71
TRAPPC8-211ENST00000582539 IL9RQ01113 521 aa10.62□□□□□ -0.71
TRAPPC8-211ENST00000582539 KRT17Q04695 432 aa10.62□□□□□ -0.71
TRAPPC8-211ENST00000582539 STRADAQ7RTN6 431 aa10.62□□□□□ -0.71
TRAPPC8-211ENST00000582539 PPIL6Q8IXY8 311 aa10.62□□□□□ -0.71
TRAPPC8-211ENST00000582539 NOA1Q8NC60 698 aaKnown RBP10.62□□□□□ -0.71
TRAPPC8-211ENST00000582539 SLC9A7Q96T83 725 aa10.62□□□□□ -0.71
TRAPPC8-211ENST00000582539 PTPRHQ9HD43 1115 aa10.62□□□□□ -0.71
TRAPPC8-211ENST00000582539 TMEM59LQ9UK28 342 aa10.62□□□□□ -0.71
TRAPPC8-211ENST00000582539 FAM169AQ9Y6X4 670 aa10.62□□□□□ -0.71
TRAPPC8-211ENST00000582539 GOLGA8QA0A0J9YX86 632 aa10.62□□□□□ -0.71
TRAPPC8-211ENST00000582539 GOLGA8OA6NCC3 632 aa10.62□□□□□ -0.71
TRAPPC8-211ENST00000582539 GOLGA8NF8WBI6 632 aa10.62□□□□□ -0.71
TRAPPC8-211ENST00000582539 CDH16O75309 829 aa10.62□□□□□ -0.71
TRAPPC8-211ENST00000582539 RALAP11233 206 aa10.62□□□□□ -0.71
TRAPPC8-211ENST00000582539 ARF4P18085 180 aaPredicted RBP10.62□□□□□ -0.71
TRAPPC8-211ENST00000582539 RRM1P23921 792 aa10.62□□□□□ -0.71
TRAPPC8-211ENST00000582539 SLC6A3Q01959 620 aa10.62□□□□□ -0.71
TRAPPC8-211ENST00000582539 MAMLD1Q13495 774 aa10.62□□□□□ -0.71
TRAPPC8-211ENST00000582539 SLC39A4Q6P5W5 647 aa10.62□□□□□ -0.71
TRAPPC8-211ENST00000582539 AFAP1L2Q8N4X5 818 aa10.62□□□□□ -0.71
TRAPPC8-211ENST00000582539 C2orf15Q8WU43 125 aaKnown RBP10.62□□□□□ -0.71
TRAPPC8-211ENST00000582539 ZNF670Q9BS34 389 aa10.62□□□□□ -0.71
TRAPPC8-211ENST00000582539 SYT11Q9BT88 431 aa10.62□□□□□ -0.71
TRAPPC8-211ENST00000582539 DPH5Q9H2P9 285 aa10.62□□□□□ -0.71
TRAPPC8-211ENST00000582539 SLC24A2Q9UI40 661 aa10.62□□□□□ -0.71
TRAPPC8-211ENST00000582539 TMEM191CA6NGB0 347 aa10.62□□□□□ -0.71
TRAPPC8-211ENST00000582539 ERI2A8K979 691 aaKnown RBP10.62□□□□□ -0.71
TRAPPC8-211ENST00000582539 KPNA7A9QM74 516 aa10.62□□□□□ -0.71
TRAPPC8-211ENST00000582539 ITGAVP06756 1048 aa10.62□□□□□ -0.71
TRAPPC8-211ENST00000582539 SP2Q02086 613 aa10.62□□□□□ -0.71
TRAPPC8-211ENST00000582539 ANO4Q32M45 955 aa10.62□□□□□ -0.71
TRAPPC8-211ENST00000582539 C10orf67Q8IYJ2 551 aa10.62□□□□□ -0.71
TRAPPC8-211ENST00000582539 CYFIP2Q96F07 1278 aa10.62□□□□□ -0.71
TRAPPC8-211ENST00000582539 AP1M1Q9BXS5 423 aa10.62□□□□□ -0.71
TRAPPC8-211ENST00000582539 PACSIN1Q9BY11 444 aa10.62□□□□□ -0.71
TRAPPC8-211ENST00000582539 DCLK3Q9C098 648 aa10.62□□□□□ -0.71
TRAPPC8-211ENST00000582539 DDX47Q9H0S4 455 aaKnown RBP10.62□□□□□ -0.71
TRAPPC8-211ENST00000582539 FETUBQ9UGM5 382 aa10.62□□□□□ -0.71
TRAPPC8-211ENST00000582539 PLAAQ9Y263 795 aa10.62□□□□□ -0.71
TRAPPC8-211ENST00000582539 DDX3YO15523 660 aaKnown RBP10.61□□□□□ -0.71
TRAPPC8-211ENST00000582539 MAP2K2P36507 400 aa10.61□□□□□ -0.71
TRAPPC8-211ENST00000582539 PSMC4P43686 418 aa10.61□□□□□ -0.71
TRAPPC8-211ENST00000582539 VCPP55072 806 aaKnown RBP10.61□□□□□ -0.71
TRAPPC8-211ENST00000582539 SRRM1Q8IYB3 904 aaKnown RBP10.61□□□□□ -0.71
TRAPPC8-211ENST00000582539 KIAA0319LQ8IZA0 1049 aa10.61□□□□□ -0.71
TRAPPC8-211ENST00000582539 SLC4A11Q8NBS3 891 aa10.61□□□□□ -0.71
TRAPPC8-211ENST00000582539 PXYLP1Q8TE99 480 aa10.61□□□□□ -0.71
TRAPPC8-211ENST00000582539 CPA5Q8WXQ8 436 aa10.61□□□□□ -0.71
TRAPPC8-211ENST00000582539 MCEEQ96PE7 176 aa10.61□□□□□ -0.71
TRAPPC8-211ENST00000582539 SETD4Q9NVD3 440 aa10.61□□□□□ -0.71
TRAPPC8-211ENST00000582539 WDR3Q9UNX4 943 aaKnown RBP eCLIP10.61□□□□□ -0.71
Retrieved 100 of 20,778 RNA–protein pairs in 18.5 ms