RNA–Protein interactions for RNA: ENST00000582293.1

RNF43-206, Transcript of ring finger protein 43, humanhuman

TSL 2

Gene RNF43, Length 324 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNF43-206ENST00000582293 CLUHO75153 1309 aa17.48■□□□□ 0.39
RNF43-206ENST00000582293 GTPBP10A4D1E9 387 aaKnown RBP17.48■□□□□ 0.39
RNF43-206ENST00000582293 LRG1P02750 347 aa17.48■□□□□ 0.39
RNF43-206ENST00000582293 PRKCSHP14314 528 aaPredicted RBP17.48■□□□□ 0.39
RNF43-206ENST00000582293 PON1P27169 355 aa17.48■□□□□ 0.39
RNF43-206ENST00000582293 ZNF165P49910 485 aa17.48■□□□□ 0.39
RNF43-206ENST00000582293 RAD23BP54727 409 aa17.48■□□□□ 0.39
RNF43-206ENST00000582293 KCNMA1Q12791 1236 aa17.48■□□□□ 0.39
RNF43-206ENST00000582293 SLC5A9Q2M3M2 681 aa17.48■□□□□ 0.39
RNF43-206ENST00000582293 SDHAF4Q5VUM1 108 aa17.48■□□□□ 0.39
RNF43-206ENST00000582293 GJB7Q6PEY0 223 aa17.48■□□□□ 0.39
RNF43-206ENST00000582293 TRIM65Q6PJ69 517 aa17.48■□□□□ 0.39
RNF43-206ENST00000582293 RRAGAQ7L523 313 aa17.48■□□□□ 0.39
RNF43-206ENST00000582293 TMC8Q8IU68 726 aa17.48■□□□□ 0.39
RNF43-206ENST00000582293 FUKQ8N0W3 1084 aa17.48■□□□□ 0.39
RNF43-206ENST00000582293 C12orf29Q8N999 325 aa17.48■□□□□ 0.39
RNF43-206ENST00000582293 FUBP3Q96I24 572 aaKnown RBP eCLIP17.48■□□□□ 0.39
RNF43-206ENST00000582293 ZNF518BQ9C0D4 1074 aa17.48■□□□□ 0.39
RNF43-206ENST00000582293 CBX8Q9HC52 389 aa17.48■□□□□ 0.39
RNF43-206ENST00000582293 LRRC10BA6NIK2 292 aa17.47■□□□□ 0.39
RNF43-206ENST00000582293 C19orf67A6NJJ6 358 aa17.47■□□□□ 0.39
RNF43-206ENST00000582293 LOC730098B7Z3J9 87 aa17.47■□□□□ 0.39
RNF43-206ENST00000582293 XYLBO75191 536 aa17.47■□□□□ 0.39
RNF43-206ENST00000582293 MOSPD3O75425 235 aa17.47■□□□□ 0.39
RNF43-206ENST00000582293 BDNFP23560 247 aa17.47■□□□□ 0.39
RNF43-206ENST00000582293 CCR2P41597 374 aa17.47■□□□□ 0.39
RNF43-206ENST00000582293 MAGEA11P43364 429 aa17.47■□□□□ 0.39
RNF43-206ENST00000582293 TUFMP49411 452 aaKnown RBP17.47■□□□□ 0.39
RNF43-206ENST00000582293 EPHA5P54756 1037 aa17.47■□□□□ 0.39
RNF43-206ENST00000582293 CYP27A1Q02318 531 aa17.47■□□□□ 0.39
RNF43-206ENST00000582293 CETN1Q12798 172 aa17.47■□□□□ 0.39
RNF43-206ENST00000582293 MAPRE1Q15691 268 aaKnown RBP17.47■□□□□ 0.39
RNF43-206ENST00000582293 DDR2Q16832 855 aa17.47■□□□□ 0.39
RNF43-206ENST00000582293 ZNF394Q53GI3 561 aa17.47■□□□□ 0.39
RNF43-206ENST00000582293 SPATA2LQ8IUW3 424 aaPredicted RBP17.47■□□□□ 0.39
RNF43-206ENST00000582293 ADHFE1Q8IWW8 467 aa17.47■□□□□ 0.39
RNF43-206ENST00000582293 SLC4A11Q8NBS3 891 aa17.47■□□□□ 0.39
RNF43-206ENST00000582293 ITFG1Q8TB96 612 aa17.47■□□□□ 0.39
RNF43-206ENST00000582293 GPR152Q8TDT2 470 aa17.47■□□□□ 0.39
RNF43-206ENST00000582293 ADAMTS19Q8TE59 1207 aa17.47■□□□□ 0.39
RNF43-206ENST00000582293 NAT10Q9H0A0 1025 aaKnown RBP17.47■□□□□ 0.39
RNF43-206ENST00000582293 VPS16Q9H269 839 aa17.47■□□□□ 0.39
RNF43-206ENST00000582293 PIDD1Q9HB75 910 aa17.47■□□□□ 0.39
RNF43-206ENST00000582293 ZNF334Q9HCZ1 680 aaPredicted RBP17.47■□□□□ 0.39
RNF43-206ENST00000582293 FAM50BQ9Y247 325 aa17.47■□□□□ 0.39
RNF43-206ENST00000582293 RNF225M0QZC1 329 aaPredicted RBP17.46■□□□□ 0.39
RNF43-206ENST00000582293 RHOP08100 348 aa17.46■□□□□ 0.39
RNF43-206ENST00000582293 CCDC130P13994 396 aa17.46■□□□□ 0.39
RNF43-206ENST00000582293 HMGA1P17096 107 aaKnown RBP17.46■□□□□ 0.39
RNF43-206ENST00000582293 SP100P23497 879 aaPredicted RBP17.46■□□□□ 0.39
RNF43-206ENST00000582293 TBXAS1P24557 533 aaPredicted RBP17.46■□□□□ 0.39
RNF43-206ENST00000582293 COPB1P53618 953 aaKnown RBP17.46■□□□□ 0.39
RNF43-206ENST00000582293 GCNT1Q02742 428 aa17.46■□□□□ 0.39
RNF43-206ENST00000582293 EXOC3L4Q17RC7 722 aa17.46■□□□□ 0.39
RNF43-206ENST00000582293 PRSS36Q5K4E3 855 aa17.46■□□□□ 0.39
RNF43-206ENST00000582293 GBP6Q6ZN66 633 aa17.46■□□□□ 0.39
RNF43-206ENST00000582293 C4orf50Q6ZRC1 276 aa17.46■□□□□ 0.39
RNF43-206ENST00000582293 FAM35AQ86V20 835 aa17.46■□□□□ 0.39
RNF43-206ENST00000582293 PPM1KQ8N3J5 372 aa17.46■□□□□ 0.39
RNF43-206ENST00000582293 GIPC2Q8TF65 315 aa17.46■□□□□ 0.39
RNF43-206ENST00000582293 PSMG2Q969U7 264 aa17.46■□□□□ 0.39
RNF43-206ENST00000582293 TCEAL4Q96EI5 215 aa17.46■□□□□ 0.39
RNF43-206ENST00000582293 TNIP3Q96KP6 325 aa17.46■□□□□ 0.39
RNF43-206ENST00000582293 CORO1BQ9BR76 489 aa17.46■□□□□ 0.39
RNF43-206ENST00000582293 NT5C1AQ9BXI3 368 aa17.46■□□□□ 0.39
RNF43-206ENST00000582293 FAM124BQ9H5Z6 455 aaPredicted RBP17.46■□□□□ 0.39
RNF43-206ENST00000582293 AVENQ9NQS1 362 aaPredicted RBP17.46■□□□□ 0.39
RNF43-206ENST00000582293 FAM49BQ9NUQ9 324 aa17.46■□□□□ 0.39
RNF43-206ENST00000582293 PRKAG3Q9UGI9 489 aa17.46■□□□□ 0.39
RNF43-206ENST00000582293 GREB1Q4ZG55 1949 aa17.45■□□□□ 0.38
RNF43-206ENST00000582293 C2CD4DB7Z1M9 353 aa17.45■□□□□ 0.38
RNF43-206ENST00000582293 PTPN2P17706 415 aa17.45■□□□□ 0.38
RNF43-206ENST00000582293 ALDH1A3P47895 512 aa17.45■□□□□ 0.38
RNF43-206ENST00000582293 EPHB3P54753 998 aa17.45■□□□□ 0.38
RNF43-206ENST00000582293 MTMR3Q13615 1198 aa17.45■□□□□ 0.38
RNF43-206ENST00000582293 PABPC1LQ4VXU2 614 aaKnown RBP17.45■□□□□ 0.38
RNF43-206ENST00000582293 DNAJB7Q7Z6W7 309 aaPredicted RBP17.45■□□□□ 0.38
RNF43-206ENST00000582293 LUZP1Q86V48 1076 aa17.45■□□□□ 0.38
RNF43-206ENST00000582293 ZMIZ2Q8NF64 920 aa17.45■□□□□ 0.38
RNF43-206ENST00000582293 SLC2A14Q8TDB8 520 aa17.45■□□□□ 0.38
RNF43-206ENST00000582293 TMEM176AQ96HP8 235 aa17.45■□□□□ 0.38
RNF43-206ENST00000582293 RPGRIP1Q96KN7 1286 aa17.45■□□□□ 0.38
RNF43-206ENST00000582293 MYADMQ96S97 322 aa17.45■□□□□ 0.38
RNF43-206ENST00000582293 IL21Q9HBE4 155 aa17.45■□□□□ 0.38
RNF43-206ENST00000582293 CNTN6Q9UQ52 1028 aa17.45■□□□□ 0.38
RNF43-206ENST00000582293 BEST1O76090 585 aa17.44■□□□□ 0.38
RNF43-206ENST00000582293 CALCAP01258 141 aa17.44■□□□□ 0.38
RNF43-206ENST00000582293 FSHRP23945 695 aa17.44■□□□□ 0.38
RNF43-206ENST00000582293 KLK7P49862 253 aa17.44■□□□□ 0.38
RNF43-206ENST00000582293 ZNF132P52740 706 aa17.44■□□□□ 0.38
RNF43-206ENST00000582293 PLD1Q13393 1074 aa17.44■□□□□ 0.38
RNF43-206ENST00000582293 VSTM1Q6UX27 236 aa17.44■□□□□ 0.38
RNF43-206ENST00000582293 ZNF512Q96ME7 567 aaPredicted RBP17.44■□□□□ 0.38
RNF43-206ENST00000582293 KCNK16Q96T55 309 aa17.44■□□□□ 0.38
RNF43-206ENST00000582293 HNRNPABQ99729 332 aaKnown RBP17.44■□□□□ 0.38
RNF43-206ENST00000582293 SMOQ99835 787 aa17.44■□□□□ 0.38
RNF43-206ENST00000582293 ZSWIM1Q9BR11 485 aa17.44■□□□□ 0.38
RNF43-206ENST00000582293 UBE2TQ9NPD8 197 aaPredicted RBP17.44■□□□□ 0.38
RNF43-206ENST00000582293 APEX2Q9UBZ4 518 aa17.44■□□□□ 0.38
RNF43-206ENST00000582293 ASB3Q9Y575 518 aa17.44■□□□□ 0.38
Retrieved 100 of 20,778 RNA–protein pairs in 56.7 ms