RNA–Protein interactions for RNA: ENST00000580798.1

SMG8-205, Transcript of SMG8, nonsense mediated mRNA decay factor, humanhuman

TSL 3

Gene SMG8, Length 583 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMG8-205ENST00000580798 PDCD2Q16342 344 aaPredicted RBP4.49□□□□□ -1.69
SMG8-205ENST00000580798 FSCN1Q16658 493 aaKnown RBP4.49□□□□□ -1.69
SMG8-205ENST00000580798 UGT8Q16880 541 aa4.49□□□□□ -1.69
SMG8-205ENST00000580798 CPEB4Q17RY0 729 aaKnown RBP eCLIP4.49□□□□□ -1.69
SMG8-205ENST00000580798 ARMC4Q5T2S8 1044 aa4.49□□□□□ -1.69
SMG8-205ENST00000580798 AGAP9Q5VTM2 703 aa4.49□□□□□ -1.69
SMG8-205ENST00000580798 ARMC6Q6NXE6 501 aa4.49□□□□□ -1.69
SMG8-205ENST00000580798 TMCO3Q6UWJ1 677 aa4.49□□□□□ -1.69
SMG8-205ENST00000580798 Q6ZNX1 250 aa4.49□□□□□ -1.69
SMG8-205ENST00000580798 TOGARAM2Q6ZUX3 1019 aa4.49□□□□□ -1.69
SMG8-205ENST00000580798 PNMA8AQ86V59 439 aaPredicted RBP4.49□□□□□ -1.69
SMG8-205ENST00000580798 MYLK4Q86YV6 388 aaPredicted RBP4.49□□□□□ -1.69
SMG8-205ENST00000580798 TRMT2AQ8IZ69 625 aaKnown RBP4.49□□□□□ -1.69
SMG8-205ENST00000580798 OR56A1Q8NGH5 318 aa4.49□□□□□ -1.69
SMG8-205ENST00000580798 SPATA18Q8TC71 538 aa4.49□□□□□ -1.69
SMG8-205ENST00000580798 C17orf50Q8WW18 174 aa4.49□□□□□ -1.69
SMG8-205ENST00000580798 CCT6BQ92526 530 aa4.49□□□□□ -1.69
SMG8-205ENST00000580798 MAML1Q92585 1016 aa4.49□□□□□ -1.69
SMG8-205ENST00000580798 SH3KBP1Q96B97 665 aa4.49□□□□□ -1.69
SMG8-205ENST00000580798 NEK1Q96PY6 1258 aa4.49□□□□□ -1.69
SMG8-205ENST00000580798 RPAP3Q9H6T3 665 aaPredicted RBP4.49□□□□□ -1.69
SMG8-205ENST00000580798 SMC4Q9NTJ3 1288 aa4.49□□□□□ -1.69
SMG8-205ENST00000580798 EXOC1Q9NV70 894 aa4.49□□□□□ -1.69
SMG8-205ENST00000580798 TRMT1Q9NXH9 659 aaKnown RBP4.49□□□□□ -1.69
SMG8-205ENST00000580798 HOXC10Q9NYD6 342 aa4.49□□□□□ -1.69
SMG8-205ENST00000580798 ZNF70Q9UC06 446 aaPredicted RBP4.49□□□□□ -1.69
SMG8-205ENST00000580798 NOL12Q9UGY1 213 aaKnown RBP eCLIP4.49□□□□□ -1.69
SMG8-205ENST00000580798 DPP7Q9UHL4 492 aa4.49□□□□□ -1.69
SMG8-205ENST00000580798 GTF3C4Q9UKN8 822 aa4.49□□□□□ -1.69
SMG8-205ENST00000580798 CFAP45Q9UL16 551 aa4.49□□□□□ -1.69
SMG8-205ENST00000580798 A0A087X0B3 334 aa4.48□□□□□ -1.69
SMG8-205ENST00000580798 F5H423 210 aaPredicted RBP4.48□□□□□ -1.69
SMG8-205ENST00000580798 TOR1BO14657 336 aa4.48□□□□□ -1.69
SMG8-205ENST00000580798 PJA2O43164 708 aa4.48□□□□□ -1.69
SMG8-205ENST00000580798 PDE8AO60658 829 aa4.48□□□□□ -1.69
SMG8-205ENST00000580798 KATNA1O75449 491 aa4.48□□□□□ -1.69
SMG8-205ENST00000580798 MBD4O95243 580 aa4.48□□□□□ -1.69
SMG8-205ENST00000580798 BPIP17213 487 aa4.48□□□□□ -1.69
SMG8-205ENST00000580798 HOXB6P17509 224 aaKnown RBP4.48□□□□□ -1.69
SMG8-205ENST00000580798 RPS6KB1P23443 525 aa4.48□□□□□ -1.69
SMG8-205ENST00000580798 CCNCP24863 283 aa4.48□□□□□ -1.69
SMG8-205ENST00000580798 STT3AP46977 705 aa4.48□□□□□ -1.69
SMG8-205ENST00000580798 ID4P47928 161 aa4.48□□□□□ -1.69
SMG8-205ENST00000580798 PAPOLAP51003 745 aaKnown RBP4.48□□□□□ -1.69
SMG8-205ENST00000580798 PROK1P58294 105 aa4.48□□□□□ -1.69
SMG8-205ENST00000580798 CLRN1P58418 232 aa4.48□□□□□ -1.69
SMG8-205ENST00000580798 BPIFB3P59826 476 aa4.48□□□□□ -1.69
SMG8-205ENST00000580798 TMF1P82094 1093 aa4.48□□□□□ -1.69
SMG8-205ENST00000580798 SARNPP82979 210 aaKnown RBP4.48□□□□□ -1.69
SMG8-205ENST00000580798 MXRA7P84157 204 aa4.48□□□□□ -1.69
SMG8-205ENST00000580798 CDK17Q00537 523 aa4.48□□□□□ -1.69
SMG8-205ENST00000580798 SAFBQ15424 915 aaKnown RBP eCLIP4.48□□□□□ -1.69
SMG8-205ENST00000580798 GPR162Q16538 588 aa4.48□□□□□ -1.69
SMG8-205ENST00000580798 FAM47AQ5JRC9 791 aa4.48□□□□□ -1.69
SMG8-205ENST00000580798 ATXN7L2Q5T6C5 722 aaPredicted RBP4.48□□□□□ -1.69
SMG8-205ENST00000580798 CXorf57Q6NSI4 855 aaKnown RBP4.48□□□□□ -1.69
SMG8-205ENST00000580798 LVRNQ6Q4G3 990 aa4.48□□□□□ -1.69
SMG8-205ENST00000580798 RHOT2Q8IXI1 618 aa4.48□□□□□ -1.69
SMG8-205ENST00000580798 CEP57L1Q8IYX8 460 aa4.48□□□□□ -1.69
SMG8-205ENST00000580798 NGEFQ8N5V2 710 aa4.48□□□□□ -1.69
SMG8-205ENST00000580798 SPATA5Q8NB90 893 aa4.48□□□□□ -1.69
SMG8-205ENST00000580798 CLRN3Q8NCR9 226 aa4.48□□□□□ -1.69
SMG8-205ENST00000580798 FBXO18Q8NFZ0 1043 aa4.48□□□□□ -1.69
SMG8-205ENST00000580798 GABPB2Q8TAK5 448 aaPredicted RBP4.48□□□□□ -1.69
SMG8-205ENST00000580798 WASF1Q92558 559 aa4.48□□□□□ -1.69
SMG8-205ENST00000580798 GJA10Q969M2 543 aa4.48□□□□□ -1.69
SMG8-205ENST00000580798 TTC17Q96AE7 1141 aa4.48□□□□□ -1.69
SMG8-205ENST00000580798 CHMP4CQ96CF2 233 aa4.48□□□□□ -1.69
SMG8-205ENST00000580798 MTMR8Q96EF0 704 aa4.48□□□□□ -1.69
SMG8-205ENST00000580798 PPM1MQ96MI6 270 aa4.48□□□□□ -1.69
SMG8-205ENST00000580798 ZNF396Q96N95 335 aaPredicted RBP4.48□□□□□ -1.69
SMG8-205ENST00000580798 DNAI2Q9GZS0 605 aa4.48□□□□□ -1.69
SMG8-205ENST00000580798 IQCGQ9H095 443 aaKnown RBP4.48□□□□□ -1.69
SMG8-205ENST00000580798 RWDD1Q9H446 243 aaPredicted RBP4.48□□□□□ -1.69
SMG8-205ENST00000580798 NLRC4Q9NPP4 1024 aa4.48□□□□□ -1.69
SMG8-205ENST00000580798 MRGBPQ9NV56 204 aa4.48□□□□□ -1.69
SMG8-205ENST00000580798 OBP2AQ9NY56 170 aa4.48□□□□□ -1.69
SMG8-205ENST00000580798 STK26Q9P289 416 aa4.48□□□□□ -1.69
SMG8-205ENST00000580798 PA2G4Q9UQ80 394 aaKnown RBP4.48□□□□□ -1.69
SMG8-205ENST00000580798 ATP11BQ9Y2G3 1177 aa4.48□□□□□ -1.69
SMG8-205ENST00000580798 IL16Q14005 1332 aa4.47□□□□□ -1.69
SMG8-205ENST00000580798 ZC3H11BA0A1B0GUI2 810 aaPredicted RBP4.47□□□□□ -1.69
SMG8-205ENST00000580798 WDR91A4D1P6 747 aa4.47□□□□□ -1.69
SMG8-205ENST00000580798 NEMP1O14524 444 aa4.47□□□□□ -1.69
SMG8-205ENST00000580798 PHF2O75151 1096 aa4.47□□□□□ -1.69
SMG8-205ENST00000580798 ELANEP08246 267 aa4.47□□□□□ -1.69
SMG8-205ENST00000580798 SNRPA1P09661 255 aaKnown RBP4.47□□□□□ -1.69
SMG8-205ENST00000580798 TSPY4P0CV99 314 aa4.47□□□□□ -1.69
SMG8-205ENST00000580798 TSPY10P0CW01 314 aa4.47□□□□□ -1.69
SMG8-205ENST00000580798 VCAM1P19320 739 aa4.47□□□□□ -1.69
SMG8-205ENST00000580798 ENPP1P22413 925 aa4.47□□□□□ -1.69
SMG8-205ENST00000580798 ADSLP30566 484 aaPredicted RBP4.47□□□□□ -1.69
SMG8-205ENST00000580798 RAD52P43351 418 aa4.47□□□□□ -1.69
SMG8-205ENST00000580798 RXRGP48443 463 aa4.47□□□□□ -1.69
SMG8-205ENST00000580798 RAP2BP61225 183 aa4.47□□□□□ -1.69
SMG8-205ENST00000580798 CCT2P78371 535 aaKnown RBP4.47□□□□□ -1.69
SMG8-205ENST00000580798 OCA2Q04671 838 aa4.47□□□□□ -1.69
SMG8-205ENST00000580798 PPP2R5CQ13362 524 aa4.47□□□□□ -1.69
SMG8-205ENST00000580798 PPP2R5BQ15173 497 aa4.47□□□□□ -1.69
SMG8-205ENST00000580798 DHCR24Q15392 516 aa4.47□□□□□ -1.69
Retrieved 100 of 20,778 RNA–protein pairs in 34.2 ms