RNA–Protein interactions for RNA: ENST00000580095.5

TOP3A-209, Transcript of DNA topoisomerase III alpha, humanhuman

TSL 1 (best)

Gene TOP3A, Length 2,929 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TOP3A-209ENST00000580095 ABLIM1O14639 778 aa11.03□□□□□ -0.64
TOP3A-209ENST00000580095 DNALI1O14645 258 aaPredicted RBP11.03□□□□□ -0.64
TOP3A-209ENST00000580095 LRCH4O75427 683 aa11.03□□□□□ -0.64
TOP3A-209ENST00000580095 CALB1P05937 261 aa11.03□□□□□ -0.64
TOP3A-209ENST00000580095 RPA3P35244 121 aaPredicted RBP11.03□□□□□ -0.64
TOP3A-209ENST00000580095 VCPP55072 806 aaKnown RBP11.03□□□□□ -0.64
TOP3A-209ENST00000580095 MGAT5Q09328 741 aa11.03□□□□□ -0.64
TOP3A-209ENST00000580095 CDO1Q16878 200 aa11.03□□□□□ -0.64
TOP3A-209ENST00000580095 SGSM1Q2NKQ1 1148 aa11.03□□□□□ -0.64
TOP3A-209ENST00000580095 EAPPQ56P03 285 aaPredicted RBP11.03□□□□□ -0.64
TOP3A-209ENST00000580095 FNBP1LQ5T0N5 605 aa11.03□□□□□ -0.64
TOP3A-209ENST00000580095 ATF7IP2Q5U623 682 aa11.03□□□□□ -0.64
TOP3A-209ENST00000580095 NPNTQ6UXI9 565 aa11.03□□□□□ -0.64
TOP3A-209ENST00000580095 SPATA21Q7Z572 469 aa11.03□□□□□ -0.64
TOP3A-209ENST00000580095 FITM2Q8N6M3 262 aa11.03□□□□□ -0.64
TOP3A-209ENST00000580095 FAM71DQ8N9W8 422 aa11.03□□□□□ -0.64
TOP3A-209ENST00000580095 PRCCQ92733 491 aaPredicted RBP11.03□□□□□ -0.64
TOP3A-209ENST00000580095 PIWIL1Q96J94 861 aaKnown RBP11.03□□□□□ -0.64
TOP3A-209ENST00000580095 GPR20Q99678 358 aa11.03□□□□□ -0.64
TOP3A-209ENST00000580095 NSRP1Q9H0G5 558 aaKnown RBP11.03□□□□□ -0.64
TOP3A-209ENST00000580095 RNPEPQ9H4A4 650 aa11.03□□□□□ -0.64
TOP3A-209ENST00000580095 TMEM134Q9H6X4 195 aa11.03□□□□□ -0.64
TOP3A-209ENST00000580095 STK38LQ9Y2H1 464 aa11.03□□□□□ -0.64
TOP3A-209ENST00000580095 GPR25O00155 361 aa11.03□□□□□ -0.64
TOP3A-209ENST00000580095 DDNO94850 711 aaPredicted RBP11.03□□□□□ -0.64
TOP3A-209ENST00000580095 ERBB2P04626 1255 aa11.03□□□□□ -0.64
TOP3A-209ENST00000580095 ITGB3P05106 788 aa11.03□□□□□ -0.64
TOP3A-209ENST00000580095 GCLCP48506 637 aaPredicted RBP11.03□□□□□ -0.64
TOP3A-209ENST00000580095 ELF3P78545 371 aaPredicted RBP11.03□□□□□ -0.64
TOP3A-209ENST00000580095 CAV1Q03135 178 aa11.03□□□□□ -0.64
TOP3A-209ENST00000580095 TFDP1Q14186 410 aa11.03□□□□□ -0.64
TOP3A-209ENST00000580095 NEDD9Q14511 834 aa11.03□□□□□ -0.64
TOP3A-209ENST00000580095 EFCAB12Q6NXP0 572 aa11.03□□□□□ -0.64
TOP3A-209ENST00000580095 ZPBP2Q6X784 338 aa11.03□□□□□ -0.64
TOP3A-209ENST00000580095 ZC3H18Q86VM9 953 aaKnown RBP11.03□□□□□ -0.64
TOP3A-209ENST00000580095 ZBTB8OSQ8IWT0 167 aa11.03□□□□□ -0.64
TOP3A-209ENST00000580095 CCDC63Q8NA47 563 aa11.03□□□□□ -0.64
TOP3A-209ENST00000580095 MAML1Q92585 1016 aa11.03□□□□□ -0.64
TOP3A-209ENST00000580095 CCDC77Q9BR77 488 aa11.03□□□□□ -0.64
TOP3A-209ENST00000580095 CCDC134Q9H6E4 229 aa11.03□□□□□ -0.64
TOP3A-209ENST00000580095 ECT2Q9H8V3 914 aa11.03□□□□□ -0.64
TOP3A-209ENST00000580095 SIX4Q9UIU6 781 aa11.03□□□□□ -0.64
TOP3A-209ENST00000580095 SLC12A4Q9UP95 1085 aa11.03□□□□□ -0.64
TOP3A-209ENST00000580095 ARID2Q68CP9 1835 aa11.02□□□□□ -0.64
TOP3A-209ENST00000580095 CTCFP49711 727 aaPredicted RBP11.02□□□□□ -0.64
TOP3A-209ENST00000580095 ITIH4Q14624 930 aa11.02□□□□□ -0.64
TOP3A-209ENST00000580095 PLCB4Q15147 1175 aa11.02□□□□□ -0.64
TOP3A-209ENST00000580095 OASLQ15646 514 aaKnown RBP11.02□□□□□ -0.64
TOP3A-209ENST00000580095 PPP1R15BQ5SWA1 713 aa11.02□□□□□ -0.64
TOP3A-209ENST00000580095 UNC45BQ8IWX7 931 aa11.02□□□□□ -0.64
TOP3A-209ENST00000580095 C1orf127Q8N9H9 656 aa11.02□□□□□ -0.64
TOP3A-209ENST00000580095 TRABDQ9H4I3 376 aa11.02□□□□□ -0.64
TOP3A-209ENST00000580095 SLC24A3Q9HC58 644 aa11.02□□□□□ -0.64
TOP3A-209ENST00000580095 GINS2Q9Y248 185 aa11.02□□□□□ -0.64
TOP3A-209ENST00000580095 C3orf70A6NLC5 250 aaPredicted RBP11.02□□□□□ -0.65
TOP3A-209ENST00000580095 SOCS7O14512 581 aa11.02□□□□□ -0.65
TOP3A-209ENST00000580095 VTNP04004 478 aa11.02□□□□□ -0.65
TOP3A-209ENST00000580095 TAC1P20366 129 aa11.02□□□□□ -0.65
TOP3A-209ENST00000580095 EFNA5P52803 228 aa11.02□□□□□ -0.65
TOP3A-209ENST00000580095 XRCC4Q13426 336 aa11.02□□□□□ -0.65
TOP3A-209ENST00000580095 R3HDM1Q15032 1099 aaKnown RBP11.02□□□□□ -0.65
TOP3A-209ENST00000580095 SNCBQ16143 134 aa11.02□□□□□ -0.65
TOP3A-209ENST00000580095 RNASEH2BQ5TBB1 312 aaKnown RBP11.02□□□□□ -0.65
TOP3A-209ENST00000580095 CDT1Q9H211 546 aa11.02□□□□□ -0.65
TOP3A-209ENST00000580095 CXCL16Q9H2A7 254 aa11.02□□□□□ -0.65
TOP3A-209ENST00000580095 L3MBTL1Q9Y468 752 aa11.02□□□□□ -0.65
TOP3A-209ENST00000580095 FAM47DPA6NHR8 397 aa11.02□□□□□ -0.65
TOP3A-209ENST00000580095 LACTBL1A8MY62 500 aa11.02□□□□□ -0.65
TOP3A-209ENST00000580095 IGF2BP3O00425 579 aaKnown RBP eCLIP11.02□□□□□ -0.65
TOP3A-209ENST00000580095 SUN1O94901 812 aa11.02□□□□□ -0.65
TOP3A-209ENST00000580095 OAS1P00973 400 aaKnown RBP11.02□□□□□ -0.65
TOP3A-209ENST00000580095 TNNC2P02585 160 aa11.02□□□□□ -0.65
TOP3A-209ENST00000580095 FGFR1P11362 822 aa11.02□□□□□ -0.65
TOP3A-209ENST00000580095 CA4P22748 312 aa11.02□□□□□ -0.65
TOP3A-209ENST00000580095 ATP5DP30049 168 aa11.02□□□□□ -0.65
TOP3A-209ENST00000580095 RAD23BP54727 409 aa11.02□□□□□ -0.65
TOP3A-209ENST00000580095 GPX6P59796 221 aa11.02□□□□□ -0.65
TOP3A-209ENST00000580095 NCALDP61601 193 aa11.02□□□□□ -0.65
TOP3A-209ENST00000580095 MCL1Q07820 350 aa11.02□□□□□ -0.65
TOP3A-209ENST00000580095 STAT4Q14765 748 aa11.02□□□□□ -0.65
TOP3A-209ENST00000580095 SLC1A5Q15758 541 aa11.02□□□□□ -0.65
TOP3A-209ENST00000580095 C15orf59Q2T9L4 293 aaPredicted RBP11.02□□□□□ -0.65
TOP3A-209ENST00000580095 BBS9Q3SYG4 887 aa11.02□□□□□ -0.65
TOP3A-209ENST00000580095 IER5Q5VY09 327 aa11.02□□□□□ -0.65
TOP3A-209ENST00000580095 JADE1Q6IE81 842 aa11.02□□□□□ -0.65
TOP3A-209ENST00000580095 MPZL3Q6UWV2 235 aa11.02□□□□□ -0.65
TOP3A-209ENST00000580095 TRABD2AQ86V40 505 aa11.02□□□□□ -0.65
TOP3A-209ENST00000580095 RFX6Q8HWS3 928 aa11.02□□□□□ -0.65
TOP3A-209ENST00000580095 RIOX2Q8IUF8 465 aa11.02□□□□□ -0.65
TOP3A-209ENST00000580095 C12orf29Q8N999 325 aa11.02□□□□□ -0.65
TOP3A-209ENST00000580095 KCTD6Q8NC69 237 aa11.02□□□□□ -0.65
TOP3A-209ENST00000580095 MIEF2Q96C03 454 aa11.02□□□□□ -0.65
TOP3A-209ENST00000580095 CFAP57Q96MR6 1250 aa11.02□□□□□ -0.65
TOP3A-209ENST00000580095 WDR83Q9BRX9 315 aaKnown RBP11.02□□□□□ -0.65
TOP3A-209ENST00000580095 PITPNM3Q9BZ71 974 aa11.02□□□□□ -0.65
TOP3A-209ENST00000580095 ELOVL4Q9GZR5 314 aa11.02□□□□□ -0.65
TOP3A-209ENST00000580095 GPATCH2LQ9NWQ4 482 aa11.02□□□□□ -0.65
TOP3A-209ENST00000580095 M0QYV0 167 aa11.01□□□□□ -0.65
TOP3A-209ENST00000580095 AVILO75366 819 aa11.01□□□□□ -0.65
TOP3A-209ENST00000580095 EDNRBP24530 442 aa11.01□□□□□ -0.65
Retrieved 100 of 20,778 RNA–protein pairs in 28.5 ms