RNA–Protein interactions for RNA: ENST00000578985.5

IFT20-208, Transcript of intraflagellar transport 20, humanhuman

TSL 3 BASIC

Gene IFT20, Length 831 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
IFT20-208ENST00000578985 HSD3B7Q9H2F3 369 aa16.39■□□□□ 0.21
IFT20-208ENST00000578985 HCFC1R1Q9NWW0 138 aa16.39■□□□□ 0.21
IFT20-208ENST00000578985 LIMA1Q9UHB6 759 aaKnown RBP16.39■□□□□ 0.21
IFT20-208ENST00000578985 BECN2A8MW95 431 aa16.38■□□□□ 0.21
IFT20-208ENST00000578985 CAVIN2O95810 425 aa16.38■□□□□ 0.21
IFT20-208ENST00000578985 PTPN2P17706 415 aa16.38■□□□□ 0.21
IFT20-208ENST00000578985 TRIM21P19474 475 aaKnown RBP16.38■□□□□ 0.21
IFT20-208ENST00000578985 SLC9A1P19634 815 aa16.38■□□□□ 0.21
IFT20-208ENST00000578985 PON1P27169 355 aa16.38■□□□□ 0.21
IFT20-208ENST00000578985 MAGEA11P43364 429 aa16.38■□□□□ 0.21
IFT20-208ENST00000578985 COPB1P53618 953 aaKnown RBP16.38■□□□□ 0.21
IFT20-208ENST00000578985 IQCB1Q15051 598 aa16.38■□□□□ 0.21
IFT20-208ENST00000578985 RRAGAQ7L523 313 aa16.38■□□□□ 0.21
IFT20-208ENST00000578985 GRASPQ7Z6J2 395 aaPredicted RBP16.38■□□□□ 0.21
IFT20-208ENST00000578985 FAM200AQ8TCP9 573 aa16.38■□□□□ 0.21
IFT20-208ENST00000578985 ZNF512Q96ME7 567 aaPredicted RBP16.38■□□□□ 0.21
IFT20-208ENST00000578985 PHF7Q9BWX1 381 aaPredicted RBP16.38■□□□□ 0.21
IFT20-208ENST00000578985 B3GNT5Q9BYG0 378 aa16.38■□□□□ 0.21
IFT20-208ENST00000578985 CBX8Q9HC52 389 aa16.38■□□□□ 0.21
IFT20-208ENST00000578985 WDR6Q9NNW5 1121 aaKnown RBP16.38■□□□□ 0.21
IFT20-208ENST00000578985 CEP72Q9P209 647 aa16.38■□□□□ 0.21
IFT20-208ENST00000578985 DNMT3BQ9UBC3 853 aaKnown RBP16.38■□□□□ 0.21
IFT20-208ENST00000578985 CLUHO75153 1309 aa16.38■□□□□ 0.21
IFT20-208ENST00000578985 CLDN5O00501 218 aa16.37■□□□□ 0.21
IFT20-208ENST00000578985 BDNFP23560 247 aa16.37■□□□□ 0.21
IFT20-208ENST00000578985 RAD23BP54727 409 aa16.37■□□□□ 0.21
IFT20-208ENST00000578985 RPL10AP62906 217 aaKnown RBP16.37■□□□□ 0.21
IFT20-208ENST00000578985 NTHL1P78549 312 aa16.37■□□□□ 0.21
IFT20-208ENST00000578985 ZNF394Q53GI3 561 aa16.37■□□□□ 0.21
IFT20-208ENST00000578985 IQCEQ6IPM2 695 aa16.37■□□□□ 0.21
IFT20-208ENST00000578985 PHLDB3Q6NSJ2 640 aa16.37■□□□□ 0.21
IFT20-208ENST00000578985 TRIM65Q6PJ69 517 aa16.37■□□□□ 0.21
IFT20-208ENST00000578985 VSTM1Q6UX27 236 aa16.37■□□□□ 0.21
IFT20-208ENST00000578985 SCN4BQ8IWT1 228 aa16.37■□□□□ 0.21
IFT20-208ENST00000578985 UBR7Q8N806 425 aa16.37■□□□□ 0.21
IFT20-208ENST00000578985 KAT5Q92993 513 aa16.37■□□□□ 0.21
IFT20-208ENST00000578985 CORO1BQ9BR76 489 aa16.37■□□□□ 0.21
IFT20-208ENST00000578985 MED10Q9BTT4 135 aa16.37■□□□□ 0.21
IFT20-208ENST00000578985 COL25A1Q9BXS0 654 aaPredicted RBP16.37■□□□□ 0.21
IFT20-208ENST00000578985 UBE2TQ9NPD8 197 aaPredicted RBP16.37■□□□□ 0.21
IFT20-208ENST00000578985 PRKAG3Q9UGI9 489 aa16.37■□□□□ 0.21
IFT20-208ENST00000578985 ASB3Q9Y575 518 aa16.37■□□□□ 0.21
IFT20-208ENST00000578985 ATP8B3O60423 1300 aa16.37■□□□□ 0.21
IFT20-208ENST00000578985 DOCK8Q8NF50 2099 aa16.36■□□□□ 0.21
IFT20-208ENST00000578985 REV3LO60673 3130 aa16.36■□□□□ 0.21
IFT20-208ENST00000578985 RHOP08100 348 aa16.36■□□□□ 0.21
IFT20-208ENST00000578985 ATP1A3P13637 1013 aa16.36■□□□□ 0.21
IFT20-208ENST00000578985 ATF6P18850 670 aa16.36■□□□□ 0.21
IFT20-208ENST00000578985 FSHRP23945 695 aa16.36■□□□□ 0.21
IFT20-208ENST00000578985 GPR15P49685 360 aa16.36■□□□□ 0.21
IFT20-208ENST00000578985 GCNT1Q02742 428 aa16.36■□□□□ 0.21
IFT20-208ENST00000578985 VEPH1Q14D04 833 aa16.36■□□□□ 0.21
IFT20-208ENST00000578985 DDR2Q16832 855 aa16.36■□□□□ 0.21
IFT20-208ENST00000578985 PABPC1LQ4VXU2 614 aaKnown RBP16.36■□□□□ 0.21
IFT20-208ENST00000578985 FKBP15Q5T1M5 1219 aa16.36■□□□□ 0.21
IFT20-208ENST00000578985 DNAJB7Q7Z6W7 309 aaPredicted RBP16.36■□□□□ 0.21
IFT20-208ENST00000578985 ITIH5Q86UX2 942 aa16.36■□□□□ 0.21
IFT20-208ENST00000578985 ADHFE1Q8IWW8 467 aa16.36■□□□□ 0.21
IFT20-208ENST00000578985 FUKQ8N0W3 1084 aa16.36■□□□□ 0.21
IFT20-208ENST00000578985 C12orf29Q8N999 325 aa16.36■□□□□ 0.21
IFT20-208ENST00000578985 GIPC2Q8TF65 315 aa16.36■□□□□ 0.21
IFT20-208ENST00000578985 TMEM176AQ96HP8 235 aa16.36■□□□□ 0.21
IFT20-208ENST00000578985 FAM81BQ96LP2 452 aa16.36■□□□□ 0.21
IFT20-208ENST00000578985 HEXIM2Q96MH2 286 aaKnown RBP16.36■□□□□ 0.21
IFT20-208ENST00000578985 KREMEN1Q96MU8 473 aa16.36■□□□□ 0.21
IFT20-208ENST00000578985 ZNF518BQ9C0D4 1074 aa16.36■□□□□ 0.21
IFT20-208ENST00000578985 FAM49BQ9NUQ9 324 aa16.36■□□□□ 0.21
IFT20-208ENST00000578985 PCDHB4Q9Y5E5 795 aa16.36■□□□□ 0.21
IFT20-208ENST00000578985 GREB1Q4ZG55 1949 aa16.36■□□□□ 0.21
IFT20-208ENST00000578985 LRRC10BA6NIK2 292 aa16.35■□□□□ 0.21
IFT20-208ENST00000578985 CCDC130P13994 396 aa16.35■□□□□ 0.21
IFT20-208ENST00000578985 ACO1P21399 889 aaKnown RBP16.35■□□□□ 0.21
IFT20-208ENST00000578985 GRIK1P39086 918 aa16.35■□□□□ 0.21
IFT20-208ENST00000578985 APBA1Q02410 837 aa16.35■□□□□ 0.21
IFT20-208ENST00000578985 KCNMA1Q12791 1236 aa16.35■□□□□ 0.21
IFT20-208ENST00000578985 TAF12Q16514 161 aa16.35■□□□□ 0.21
IFT20-208ENST00000578985 SDHAF4Q5VUM1 108 aa16.35■□□□□ 0.21
IFT20-208ENST00000578985 GJB7Q6PEY0 223 aa16.35■□□□□ 0.21
IFT20-208ENST00000578985 LRSAM1Q6UWE0 723 aa16.35■□□□□ 0.21
IFT20-208ENST00000578985 PAQR9Q6ZVX9 377 aa16.35■□□□□ 0.21
IFT20-208ENST00000578985 ENOSF1Q7L5Y1 443 aa16.35■□□□□ 0.21
IFT20-208ENST00000578985 FAM35AQ86V20 835 aa16.35■□□□□ 0.21
IFT20-208ENST00000578985 LUZP1Q86V48 1076 aa16.35■□□□□ 0.21
IFT20-208ENST00000578985 HS6ST3Q8IZP7 471 aa16.35■□□□□ 0.21
IFT20-208ENST00000578985 SLC4A11Q8NBS3 891 aa16.35■□□□□ 0.21
IFT20-208ENST00000578985 GPR152Q8TDT2 470 aa16.35■□□□□ 0.21
IFT20-208ENST00000578985 ADAMTS19Q8TE59 1207 aa16.35■□□□□ 0.21
IFT20-208ENST00000578985 PSMG2Q969U7 264 aa16.35■□□□□ 0.21
IFT20-208ENST00000578985 CYFIP2Q96F07 1278 aa16.35■□□□□ 0.21
IFT20-208ENST00000578985 RPGRIP1Q96KN7 1286 aa16.35■□□□□ 0.21
IFT20-208ENST00000578985 TSPY26PQ9H489 355 aa16.35■□□□□ 0.21
IFT20-208ENST00000578985 SIX2Q9NPC8 291 aa16.35■□□□□ 0.21
IFT20-208ENST00000578985 AVENQ9NQS1 362 aaPredicted RBP16.35■□□□□ 0.21
IFT20-208ENST00000578985 ASAH2Q9NR71 780 aa16.35■□□□□ 0.21
IFT20-208ENST00000578985 APEX2Q9UBZ4 518 aa16.35■□□□□ 0.21
IFT20-208ENST00000578985 NR2E1Q9Y466 385 aa16.35■□□□□ 0.21
IFT20-208ENST00000578985 LGALS16A8MUM7 142 aa16.34■□□□□ 0.21
IFT20-208ENST00000578985 TRIM66O15016 1216 aa16.34■□□□□ 0.21
IFT20-208ENST00000578985 SP100P23497 879 aaPredicted RBP16.34■□□□□ 0.21
IFT20-208ENST00000578985 ANXA13P27216 316 aa16.34■□□□□ 0.21
Retrieved 100 of 20,778 RNA–protein pairs in 21.8 ms