RNA–Protein interactions for RNA: ENST00000578910.1

CCDC57-212, Transcript of coiled-coil domain containing 57, humanhuman

TSL 5

Gene CCDC57, Length 796 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC57-212ENST00000578910 NDRG2Q9UN36 371 aaKnown RBP15.59■□□□□ 0.09
CCDC57-212ENST00000578910 MRPS17Q9Y2R5 130 aaKnown RBP15.59■□□□□ 0.09
CCDC57-212ENST00000578910 NME7Q9Y5B8 376 aa15.59■□□□□ 0.09
CCDC57-212ENST00000578910 CACNA1IQ9P0X4 2223 aa15.59■□□□□ 0.09
CCDC57-212ENST00000578910 PDXKO00764 312 aa15.58■□□□□ 0.08
CCDC57-212ENST00000578910 PHACTR2O75167 634 aa15.58■□□□□ 0.08
CCDC57-212ENST00000578910 ZNF202O95125 648 aa15.58■□□□□ 0.08
CCDC57-212ENST00000578910 PRAMEF12O95522 483 aa15.58■□□□□ 0.08
CCDC57-212ENST00000578910 C4BPAP04003 597 aaKnown RBP15.58■□□□□ 0.08
CCDC57-212ENST00000578910 TRPC3Q13507 836 aa15.58■□□□□ 0.08
CCDC57-212ENST00000578910 CFAP221Q4G0U5 840 aa15.58■□□□□ 0.08
CCDC57-212ENST00000578910 TXNDC8Q6A555 127 aa15.58■□□□□ 0.08
CCDC57-212ENST00000578910 SLC9A9Q8IVB4 645 aa15.58■□□□□ 0.08
CCDC57-212ENST00000578910 ZNF687Q8N1G0 1237 aa15.58■□□□□ 0.08
CCDC57-212ENST00000578910 TTC8Q8TAM2 541 aa15.58■□□□□ 0.08
CCDC57-212ENST00000578910 GOLGA5Q8TBA6 731 aa15.58■□□□□ 0.08
CCDC57-212ENST00000578910 CSGALNACT1Q8TDX6 532 aa15.58■□□□□ 0.08
CCDC57-212ENST00000578910 FAM3CQ92520 227 aa15.58■□□□□ 0.08
CCDC57-212ENST00000578910 FUBP3Q96I24 572 aaKnown RBP eCLIP15.58■□□□□ 0.08
CCDC57-212ENST00000578910 ZFYVE19Q96K21 471 aa15.58■□□□□ 0.08
CCDC57-212ENST00000578910 SYT15Q9BQS2 421 aa15.58■□□□□ 0.08
CCDC57-212ENST00000578910 SPATA6Q9NWH7 488 aaPredicted RBP15.58■□□□□ 0.08
CCDC57-212ENST00000578910 OBP2AQ9NY56 170 aa15.58■□□□□ 0.08
CCDC57-212ENST00000578910 PIAS3Q9Y6X2 628 aa15.58■□□□□ 0.08
CCDC57-212ENST00000578910 R4GN57 208 aa15.58■□□□□ 0.08
CCDC57-212ENST00000578910 ZFHX2Q9C0A1 2572 aaPredicted RBP15.58■□□□□ 0.08
CCDC57-212ENST00000578910 PRR23AA6NEV1 266 aa15.57■□□□□ 0.08
CCDC57-212ENST00000578910 LRRIQ3A6PVS8 624 aaPredicted RBP15.57■□□□□ 0.08
CCDC57-212ENST00000578910 TACC1O75410 805 aa15.57■□□□□ 0.08
CCDC57-212ENST00000578910 NOL4O94818 638 aa15.57■□□□□ 0.08
CCDC57-212ENST00000578910 BDNFP23560 247 aa15.57■□□□□ 0.08
CCDC57-212ENST00000578910 CCNE1P24864 410 aa15.57■□□□□ 0.08
CCDC57-212ENST00000578910 MAGEA11P43364 429 aa15.57■□□□□ 0.08
CCDC57-212ENST00000578910 RPS9P46781 194 aaKnown RBP15.57■□□□□ 0.08
CCDC57-212ENST00000578910 DLG4P78352 724 aa15.57■□□□□ 0.08
CCDC57-212ENST00000578910 CLDN10P78369 228 aa15.57■□□□□ 0.08
CCDC57-212ENST00000578910 DPYDQ12882 1025 aa15.57■□□□□ 0.08
CCDC57-212ENST00000578910 C4orf50Q6ZRC1 276 aa15.57■□□□□ 0.08
CCDC57-212ENST00000578910 CELF5Q8N6W0 485 aaKnown RBP15.57■□□□□ 0.08
CCDC57-212ENST00000578910 OR6B3Q8NGW1 331 aa15.57■□□□□ 0.08
CCDC57-212ENST00000578910 BPIFB1Q8TDL5 484 aa15.57■□□□□ 0.08
CCDC57-212ENST00000578910 TMEM174Q8WUU8 243 aa15.57■□□□□ 0.08
CCDC57-212ENST00000578910 NKD2Q969F2 451 aaPredicted RBP15.57■□□□□ 0.08
CCDC57-212ENST00000578910 ELMO3Q96BJ8 720 aa15.57■□□□□ 0.08
CCDC57-212ENST00000578910 MYRFLQ96LU7 910 aa15.57■□□□□ 0.08
CCDC57-212ENST00000578910 GCNAQ96QF7 691 aa15.57■□□□□ 0.08
CCDC57-212ENST00000578910 XYLT2Q9H1B5 865 aa15.57■□□□□ 0.08
CCDC57-212ENST00000578910 SNX25Q9H3E2 840 aa15.57■□□□□ 0.08
CCDC57-212ENST00000578910 LMAN1LQ9HAT1 526 aa15.57■□□□□ 0.08
CCDC57-212ENST00000578910 NXF1Q9UBU9 619 aaKnown RBP15.57■□□□□ 0.08
CCDC57-212ENST00000578910 USP34Q70CQ2 3546 aa15.56■□□□□ 0.08
CCDC57-212ENST00000578910 LAMTOR5O43504 91 aa15.56■□□□□ 0.08
CCDC57-212ENST00000578910 RHOBTB3O94955 611 aa15.56■□□□□ 0.08
CCDC57-212ENST00000578910 STAU1O95793 577 aaKnown RBP15.56■□□□□ 0.08
CCDC57-212ENST00000578910 PTPN1P18031 435 aaKnown RBP15.56■□□□□ 0.08
CCDC57-212ENST00000578910 ATICP31939 592 aa15.56■□□□□ 0.08
CCDC57-212ENST00000578910 GRIK1P39086 918 aa15.56■□□□□ 0.08
CCDC57-212ENST00000578910 MAGEA9P43362 315 aa15.56■□□□□ 0.08
CCDC57-212ENST00000578910 SOX9P48436 509 aa15.56■□□□□ 0.08
CCDC57-212ENST00000578910 KPNA1P52294 538 aaPredicted RBP15.56■□□□□ 0.08
CCDC57-212ENST00000578910 MLLT6P55198 1093 aaPredicted RBP15.56■□□□□ 0.08
CCDC57-212ENST00000578910 CDH8P55286 799 aa15.56■□□□□ 0.08
CCDC57-212ENST00000578910 CYP27A1Q02318 531 aa15.56■□□□□ 0.08
CCDC57-212ENST00000578910 BIRC3Q13489 604 aa15.56■□□□□ 0.08
CCDC57-212ENST00000578910 ARHGAP29Q52LW3 1261 aa15.56■□□□□ 0.08
CCDC57-212ENST00000578910 TDRD10Q5VZ19 366 aaKnown RBP15.56■□□□□ 0.08
CCDC57-212ENST00000578910 MON1AQ86VX9 555 aa15.56■□□□□ 0.08
CCDC57-212ENST00000578910 MYCBPAPQ8TBZ2 947 aa15.56■□□□□ 0.08
CCDC57-212ENST00000578910 MRPS31Q92665 395 aaKnown RBP15.56■□□□□ 0.08
CCDC57-212ENST00000578910 USP13Q92995 863 aaPredicted RBP15.56■□□□□ 0.08
CCDC57-212ENST00000578910 MYLPFQ96A32 169 aa15.56■□□□□ 0.08
CCDC57-212ENST00000578910 TRMT2BQ96GJ1 504 aaKnown RBP15.56■□□□□ 0.08
CCDC57-212ENST00000578910 CYP2S1Q96SQ9 504 aa15.56■□□□□ 0.08
CCDC57-212ENST00000578910 GKN1Q9NS71 199 aa15.56■□□□□ 0.08
CCDC57-212ENST00000578910 GTSE1Q9NYZ3 720 aa15.56■□□□□ 0.08
CCDC57-212ENST00000578910 UXTQ9UBK9 157 aaPredicted RBP15.56■□□□□ 0.08
CCDC57-212ENST00000578910 ZMYM5Q9UJ78 669 aa15.56■□□□□ 0.08
CCDC57-212ENST00000578910 MAPK8IP1Q9UQF2 711 aa15.56■□□□□ 0.08
CCDC57-212ENST00000578910 CCL26Q9Y258 94 aa15.56■□□□□ 0.08
CCDC57-212ENST00000578910 MIA3Q5JRA6 1907 aa15.56■□□□□ 0.08
CCDC57-212ENST00000578910 SOBPA7XYQ1 873 aa15.55■□□□□ 0.08
CCDC57-212ENST00000578910 TADA3O75528 432 aa15.55■□□□□ 0.08
CCDC57-212ENST00000578910 VNN1O95497 513 aa15.55■□□□□ 0.08
CCDC57-212ENST00000578910 NR3C1P04150 777 aa15.55■□□□□ 0.08
CCDC57-212ENST00000578910 DDX6P26196 483 aaKnown RBP eCLIP15.55■□□□□ 0.08
CCDC57-212ENST00000578910 AVPR1AP37288 418 aa15.55■□□□□ 0.08
CCDC57-212ENST00000578910 AP3M2P53677 418 aa15.55■□□□□ 0.08
CCDC57-212ENST00000578910 TNNC1P63316 161 aa15.55■□□□□ 0.08
CCDC57-212ENST00000578910 CSTF1Q05048 431 aaKnown RBP15.55■□□□□ 0.08
CCDC57-212ENST00000578910 TNK2Q07912 1038 aa15.55■□□□□ 0.08
CCDC57-212ENST00000578910 MTAPQ13126 283 aa15.55■□□□□ 0.08
CCDC57-212ENST00000578910 BECN1Q14457 450 aa15.55■□□□□ 0.08
CCDC57-212ENST00000578910 MAPRE1Q15691 268 aaKnown RBP15.55■□□□□ 0.08
CCDC57-212ENST00000578910 MDH1BQ5I0G3 518 aa15.55■□□□□ 0.08
CCDC57-212ENST00000578910 CCDC47Q96A33 483 aaKnown RBP15.55■□□□□ 0.08
CCDC57-212ENST00000578910 SYAP1Q96A49 352 aaPredicted RBP15.55■□□□□ 0.08
CCDC57-212ENST00000578910 PCED1BQ96HM7 432 aa15.55■□□□□ 0.08
CCDC57-212ENST00000578910 DPEP3Q9H4B8 488 aa15.55■□□□□ 0.08
CCDC57-212ENST00000578910 C8orf33Q9H7E9 229 aaPredicted RBP15.55■□□□□ 0.08
CCDC57-212ENST00000578910 TDP1Q9NUW8 608 aa15.55■□□□□ 0.08
Retrieved 100 of 20,778 RNA–protein pairs in 25.4 ms