RNA–Protein interactions for RNA: ENST00000578692.1

CRLF3-203, Transcript of cytokine receptor like factor 3, humanhuman

TSL 2

Gene CRLF3, Length 1,392 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CRLF3-203ENST00000578692 FANCMQ8IYD8 2048 aa17.01■□□□□ 0.31
CRLF3-203ENST00000578692 DENND4CQ5VZ89 1909 aa17.01■□□□□ 0.31
CRLF3-203ENST00000578692 SLC38A8A6NNN8 435 aa17.01■□□□□ 0.31
CRLF3-203ENST00000578692 SOBPA7XYQ1 873 aa17.01■□□□□ 0.31
CRLF3-203ENST00000578692 KINO60870 393 aaKnown RBP17.01■□□□□ 0.31
CRLF3-203ENST00000578692 ATP2C2O75185 946 aa17.01■□□□□ 0.31
CRLF3-203ENST00000578692 CHRNB1P11230 501 aa17.01■□□□□ 0.31
CRLF3-203ENST00000578692 AVPR1AP37288 418 aa17.01■□□□□ 0.31
CRLF3-203ENST00000578692 SOX9P48436 509 aa17.01■□□□□ 0.31
CRLF3-203ENST00000578692 PLCB2Q00722 1185 aa17.01■□□□□ 0.31
CRLF3-203ENST00000578692 CCDC142Q17RM4 750 aa17.01■□□□□ 0.31
CRLF3-203ENST00000578692 TXNDC8Q6A555 127 aa17.01■□□□□ 0.31
CRLF3-203ENST00000578692 MAMSTRQ6ZN01 415 aa17.01■□□□□ 0.31
CRLF3-203ENST00000578692 C4orf50Q6ZRC1 276 aa17.01■□□□□ 0.31
CRLF3-203ENST00000578692 SCN4BQ8IWT1 228 aa17.01■□□□□ 0.31
CRLF3-203ENST00000578692 TTC8Q8TAM2 541 aa17.01■□□□□ 0.31
CRLF3-203ENST00000578692 ATRIPQ8WXE1 791 aa17.01■□□□□ 0.31
CRLF3-203ENST00000578692 MRPS31Q92665 395 aaKnown RBP17.01■□□□□ 0.31
CRLF3-203ENST00000578692 PAGE5Q96GU1 130 aa17.01■□□□□ 0.31
CRLF3-203ENST00000578692 SYT15Q9BQS2 421 aa17.01■□□□□ 0.31
CRLF3-203ENST00000578692 MAGEC2Q9UBF1 373 aaPredicted RBP17.01■□□□□ 0.31
CRLF3-203ENST00000578692 VPS13AQ96RL7 3174 aa17■□□□□ 0.31
CRLF3-203ENST00000578692 A0A1B0GVL5 298 aa17■□□□□ 0.31
CRLF3-203ENST00000578692 SPECC1L-ADORA2AF8WAN1 911 aa17■□□□□ 0.31
CRLF3-203ENST00000578692 ACTN4O43707 911 aaKnown RBP17■□□□□ 0.31
CRLF3-203ENST00000578692 KLRC4O43908 158 aa17■□□□□ 0.31
CRLF3-203ENST00000578692 EXOC3O60645 756 aa17■□□□□ 0.31
CRLF3-203ENST00000578692 NOL4O94818 638 aa17■□□□□ 0.31
CRLF3-203ENST00000578692 PDGFRBP09619 1106 aa17■□□□□ 0.31
CRLF3-203ENST00000578692 WARSP23381 471 aaKnown RBP17■□□□□ 0.31
CRLF3-203ENST00000578692 CMA1P23946 247 aa17■□□□□ 0.31
CRLF3-203ENST00000578692 PSMD2Q13200 908 aa17■□□□□ 0.31
CRLF3-203ENST00000578692 TSSK4Q6SA08 328 aa17■□□□□ 0.31
CRLF3-203ENST00000578692 MON1AQ86VX9 555 aa17■□□□□ 0.31
CRLF3-203ENST00000578692 RALGPS2Q86X27 583 aaPredicted RBP17■□□□□ 0.31
CRLF3-203ENST00000578692 ZNF516Q92618 1163 aa17■□□□□ 0.31
CRLF3-203ENST00000578692 TRMT2BQ96GJ1 504 aaKnown RBP17■□□□□ 0.31
CRLF3-203ENST00000578692 SPATA32Q96LK8 384 aa17■□□□□ 0.31
CRLF3-203ENST00000578692 MYRFLQ96LU7 910 aa17■□□□□ 0.31
CRLF3-203ENST00000578692 IER2Q9BTL4 223 aa17■□□□□ 0.31
CRLF3-203ENST00000578692 GKN1Q9NS71 199 aa17■□□□□ 0.31
CRLF3-203ENST00000578692 TDP1Q9NUW8 608 aa17■□□□□ 0.31
CRLF3-203ENST00000578692 ZSCAN32Q9NX65 697 aa17■□□□□ 0.31
CRLF3-203ENST00000578692 PCDHGA2Q9Y5H1 932 aa17■□□□□ 0.31
CRLF3-203ENST00000578692 GTF3C3Q9Y5Q9 886 aa17■□□□□ 0.31
CRLF3-203ENST00000578692 FAM163BP0C2L3 166 aa16.99■□□□□ 0.31
CRLF3-203ENST00000578692 PFKFB1P16118 471 aa16.99■□□□□ 0.31
CRLF3-203ENST00000578692 CTHP32929 405 aa16.99■□□□□ 0.31
CRLF3-203ENST00000578692 GNL1P36915 607 aaPredicted RBP16.99■□□□□ 0.31
CRLF3-203ENST00000578692 MAGEA11P43364 429 aa16.99■□□□□ 0.31
CRLF3-203ENST00000578692 PSMC1P62191 440 aaKnown RBP16.99■□□□□ 0.31
CRLF3-203ENST00000578692 KRT85P78386 507 aa16.99■□□□□ 0.31
CRLF3-203ENST00000578692 TNK2Q07912 1038 aa16.99■□□□□ 0.31
CRLF3-203ENST00000578692 STK4Q13043 487 aa16.99■□□□□ 0.31
CRLF3-203ENST00000578692 TRPC3Q13507 836 aa16.99■□□□□ 0.31
CRLF3-203ENST00000578692 MAPRE1Q15691 268 aaKnown RBP16.99■□□□□ 0.31
CRLF3-203ENST00000578692 WDR72Q3MJ13 1102 aa16.99■□□□□ 0.31
CRLF3-203ENST00000578692 KMT5BQ4FZB7 885 aa16.99■□□□□ 0.31
CRLF3-203ENST00000578692 ZBTB44Q8NCP5 570 aa16.99■□□□□ 0.31
CRLF3-203ENST00000578692 GOLGA5Q8TBA6 731 aa16.99■□□□□ 0.31
CRLF3-203ENST00000578692 NELL1Q92832 810 aa16.99■□□□□ 0.31
CRLF3-203ENST00000578692 USP13Q92995 863 aaPredicted RBP16.99■□□□□ 0.31
CRLF3-203ENST00000578692 SNX25Q9H3E2 840 aa16.99■□□□□ 0.31
CRLF3-203ENST00000578692 CRTAC1Q9NQ79 661 aa16.99■□□□□ 0.31
CRLF3-203ENST00000578692 PRMT8Q9NR22 394 aaPredicted RBP16.99■□□□□ 0.31
CRLF3-203ENST00000578692 EXOC1Q9NV70 894 aa16.99■□□□□ 0.31
CRLF3-203ENST00000578692 USP25Q9UHP3 1055 aa16.99■□□□□ 0.31
CRLF3-203ENST00000578692 ZDHHC9Q9Y397 364 aa16.99■□□□□ 0.31
CRLF3-203ENST00000578692 TACC1O75410 805 aa16.98■□□□□ 0.31
CRLF3-203ENST00000578692 BDNFP23560 247 aa16.98■□□□□ 0.31
CRLF3-203ENST00000578692 LRRC32Q14392 662 aa16.98■□□□□ 0.31
CRLF3-203ENST00000578692 PPP2R5DQ14738 602 aa16.98■□□□□ 0.31
CRLF3-203ENST00000578692 ITPRIPL2Q3MIP1 535 aa16.98■□□□□ 0.31
CRLF3-203ENST00000578692 TXNDC11Q6PKC3 985 aa16.98■□□□□ 0.31
CRLF3-203ENST00000578692 VSTM1Q6UX27 236 aa16.98■□□□□ 0.31
CRLF3-203ENST00000578692 SUMF1Q8NBK3 374 aa16.98■□□□□ 0.31
CRLF3-203ENST00000578692 OR6B3Q8NGW1 331 aa16.98■□□□□ 0.31
CRLF3-203ENST00000578692 MYLPFQ96A32 169 aa16.98■□□□□ 0.31
CRLF3-203ENST00000578692 MRPL45Q9BRJ2 306 aaKnown RBP16.98■□□□□ 0.31
CRLF3-203ENST00000578692 FAM126AQ9BYI3 521 aaPredicted RBP16.98■□□□□ 0.31
CRLF3-203ENST00000578692 GZF1Q9H116 711 aaPredicted RBP16.98■□□□□ 0.31
CRLF3-203ENST00000578692 KIF9Q9HAQ2 790 aa16.98■□□□□ 0.31
CRLF3-203ENST00000578692 CCL26Q9Y258 94 aa16.98■□□□□ 0.31
CRLF3-203ENST00000578692 ZNF638Q14966 1978 aaKnown RBP16.97■□□□□ 0.31
CRLF3-203ENST00000578692 PHACTR2O75167 634 aa16.97■□□□□ 0.31
CRLF3-203ENST00000578692 ATICP31939 592 aa16.97■□□□□ 0.31
CRLF3-203ENST00000578692 GRIK1P39086 918 aa16.97■□□□□ 0.31
CRLF3-203ENST00000578692 CCR3P51677 355 aa16.97■□□□□ 0.31
CRLF3-203ENST00000578692 NRLP54845 237 aa16.97■□□□□ 0.31
CRLF3-203ENST00000578692 MYL6P60660 151 aa16.97■□□□□ 0.31
CRLF3-203ENST00000578692 TNNC1P63316 161 aa16.97■□□□□ 0.31
CRLF3-203ENST00000578692 CYP27A1Q02318 531 aa16.97■□□□□ 0.31
CRLF3-203ENST00000578692 PON2Q15165 354 aa16.97■□□□□ 0.31
CRLF3-203ENST00000578692 DGKKQ5KSL6 1271 aa16.97■□□□□ 0.31
CRLF3-203ENST00000578692 FSIP1Q8NA03 581 aa16.97■□□□□ 0.31
CRLF3-203ENST00000578692 KIAA0895Q8NCT3 520 aa16.97■□□□□ 0.31
CRLF3-203ENST00000578692 MYCBPAPQ8TBZ2 947 aa16.97■□□□□ 0.31
CRLF3-203ENST00000578692 RUBCNQ92622 972 aa16.97■□□□□ 0.31
CRLF3-203ENST00000578692 CHAMP1Q96JM3 812 aa16.97■□□□□ 0.31
CRLF3-203ENST00000578692 FAM83CQ9BQN1 747 aa16.97■□□□□ 0.31
Retrieved 100 of 20,778 RNA–protein pairs in 38.1 ms