RNA–Protein interactions for RNA: ENST00000578663.1

CDK5RAP3-209, Transcript of CDK5 regulatory subunit associated protein 3, humanhuman

TSL 3

Gene CDK5RAP3, Length 949 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDK5RAP3-209ENST00000578663 POLR3BQ9NW08 1133 aaPredicted RBP7.8□□□□□ -1.16
CDK5RAP3-209ENST00000578663 MYLKQ15746 1914 aa7.8□□□□□ -1.16
CDK5RAP3-209ENST00000578663 SPG11Q96JI7 2443 aa7.79□□□□□ -1.16
CDK5RAP3-209ENST00000578663 TLN1Q9Y490 2541 aaKnown RBP7.79□□□□□ -1.16
CDK5RAP3-209ENST00000578663 ALDH1A2O94788 518 aa7.79□□□□□ -1.16
CDK5RAP3-209ENST00000578663 SERPINF2P08697 491 aa7.79□□□□□ -1.16
CDK5RAP3-209ENST00000578663 ARSAP15289 507 aa7.79□□□□□ -1.16
CDK5RAP3-209ENST00000578663 XBP1P17861 261 aa7.79□□□□□ -1.16
CDK5RAP3-209ENST00000578663 TYMPP19971 482 aa7.79□□□□□ -1.16
CDK5RAP3-209ENST00000578663 CR2P20023 1033 aa7.79□□□□□ -1.16
CDK5RAP3-209ENST00000578663 PROZP22891 400 aa7.79□□□□□ -1.16
CDK5RAP3-209ENST00000578663 PAX3P23760 479 aa7.79□□□□□ -1.16
CDK5RAP3-209ENST00000578663 LRPAP1P30533 357 aa7.79□□□□□ -1.16
CDK5RAP3-209ENST00000578663 EIF2S3P41091 472 aaKnown RBP7.79□□□□□ -1.16
CDK5RAP3-209ENST00000578663 TUFMP49411 452 aaKnown RBP7.79□□□□□ -1.16
CDK5RAP3-209ENST00000578663 CYP4F8P98187 520 aa7.79□□□□□ -1.16
CDK5RAP3-209ENST00000578663 SMARCB1Q12824 385 aa7.79□□□□□ -1.16
CDK5RAP3-209ENST00000578663 CUL4AQ13619 759 aa7.79□□□□□ -1.16
CDK5RAP3-209ENST00000578663 BYSLQ13895 437 aaKnown RBP7.79□□□□□ -1.16
CDK5RAP3-209ENST00000578663 CALCRLQ16602 461 aa7.79□□□□□ -1.16
CDK5RAP3-209ENST00000578663 DUOXA1Q1HG43 343 aa7.79□□□□□ -1.16
CDK5RAP3-209ENST00000578663 HSF5Q4G112 596 aaPredicted RBP7.79□□□□□ -1.16
CDK5RAP3-209ENST00000578663 TAF1BQ53T94 588 aaPredicted RBP7.79□□□□□ -1.16
CDK5RAP3-209ENST00000578663 LYSMD4Q5XG99 296 aa7.79□□□□□ -1.16
CDK5RAP3-209ENST00000578663 TRIM68Q6AZZ1 485 aa7.79□□□□□ -1.16
CDK5RAP3-209ENST00000578663 ANO7Q6IWH7 933 aa7.79□□□□□ -1.16
CDK5RAP3-209ENST00000578663 CC2D1AQ6P1N0 951 aaPredicted RBP7.79□□□□□ -1.16
CDK5RAP3-209ENST00000578663 MAEAQ7L5Y9 396 aa7.79□□□□□ -1.16
CDK5RAP3-209ENST00000578663 USP37Q86T82 979 aa7.79□□□□□ -1.16
CDK5RAP3-209ENST00000578663 GPIHBP1Q8IV16 184 aa7.79□□□□□ -1.16
CDK5RAP3-209ENST00000578663 HSCBQ8IWL3 235 aa7.79□□□□□ -1.16
CDK5RAP3-209ENST00000578663 ATAD1Q8NBU5 361 aa7.79□□□□□ -1.16
CDK5RAP3-209ENST00000578663 MDGA1Q8NFP4 955 aa7.79□□□□□ -1.16
CDK5RAP3-209ENST00000578663 USP33Q8TEY7 942 aa7.79□□□□□ -1.16
CDK5RAP3-209ENST00000578663 KIFAP3Q92845 792 aa7.79□□□□□ -1.16
CDK5RAP3-209ENST00000578663 USP13Q92995 863 aaPredicted RBP7.79□□□□□ -1.16
CDK5RAP3-209ENST00000578663 ATP2A3Q93084 1043 aa7.79□□□□□ -1.16
CDK5RAP3-209ENST00000578663 WBP1Q96G27 269 aa7.79□□□□□ -1.16
CDK5RAP3-209ENST00000578663 AIFM3Q96NN9 605 aa7.79□□□□□ -1.16
CDK5RAP3-209ENST00000578663 ACAP3Q96P50 834 aa7.79□□□□□ -1.16
CDK5RAP3-209ENST00000578663 PGLYRP2Q96PD5 576 aa7.79□□□□□ -1.16
CDK5RAP3-209ENST00000578663 ACO2Q99798 780 aaKnown RBP7.79□□□□□ -1.16
CDK5RAP3-209ENST00000578663 SLC46A2Q9BY10 475 aa7.79□□□□□ -1.16
CDK5RAP3-209ENST00000578663 TTC12Q9H892 705 aaPredicted RBP7.79□□□□□ -1.16
CDK5RAP3-209ENST00000578663 ECT2Q9H8V3 914 aa7.79□□□□□ -1.16
CDK5RAP3-209ENST00000578663 CAPN10Q9HC96 672 aa7.79□□□□□ -1.16
CDK5RAP3-209ENST00000578663 TDP1Q9NUW8 608 aa7.79□□□□□ -1.16
CDK5RAP3-209ENST00000578663 DNAAF2Q9NVR5 837 aaKnown RBP7.79□□□□□ -1.16
CDK5RAP3-209ENST00000578663 MBD1Q9UIS9 605 aaPredicted RBP7.79□□□□□ -1.16
CDK5RAP3-209ENST00000578663 PILRBQ9UKJ0 227 aa7.79□□□□□ -1.16
CDK5RAP3-209ENST00000578663 MMP17Q9ULZ9 603 aa7.79□□□□□ -1.16
CDK5RAP3-209ENST00000578663 SLC6A14Q9UN76 642 aa7.79□□□□□ -1.16
CDK5RAP3-209ENST00000578663 USP20Q9Y2K6 914 aa7.79□□□□□ -1.16
CDK5RAP3-209ENST00000578663 ZNF638Q14966 1978 aaKnown RBP7.79□□□□□ -1.16
CDK5RAP3-209ENST00000578663 PDZD2O15018 2839 aa7.79□□□□□ -1.16
CDK5RAP3-209ENST00000578663 STK36Q9NRP7 1315 aa7.78□□□□□ -1.16
CDK5RAP3-209ENST00000578663 A0A1B0GTL3 188 aa7.78□□□□□ -1.16
CDK5RAP3-209ENST00000578663 ARHGEF35A5YM69 484 aa7.78□□□□□ -1.16
CDK5RAP3-209ENST00000578663 K7ERI5 159 aa7.78□□□□□ -1.16
CDK5RAP3-209ENST00000578663 ABLIM1O14639 778 aa7.78□□□□□ -1.16
CDK5RAP3-209ENST00000578663 TERTO14746 1132 aaKnown RBP7.78□□□□□ -1.16
CDK5RAP3-209ENST00000578663 TLX3O43711 291 aaPredicted RBP7.78□□□□□ -1.16
CDK5RAP3-209ENST00000578663 CDKL5O76039 1030 aa7.78□□□□□ -1.16
CDK5RAP3-209ENST00000578663 OR4Q2P0C623 313 aa7.78□□□□□ -1.16
CDK5RAP3-209ENST00000578663 SPATA31C1P0DKV0 1188 aa7.78□□□□□ -1.16
CDK5RAP3-209ENST00000578663 CD59P13987 128 aa7.78□□□□□ -1.16
CDK5RAP3-209ENST00000578663 FDPSP14324 419 aaKnown RBP7.78□□□□□ -1.16
CDK5RAP3-209ENST00000578663 ATF6P18850 670 aa7.78□□□□□ -1.16
CDK5RAP3-209ENST00000578663 LIG1P18858 919 aa7.78□□□□□ -1.16
CDK5RAP3-209ENST00000578663 CYP3A5P20815 502 aa7.78□□□□□ -1.16
CDK5RAP3-209ENST00000578663 MUTP22033 750 aa7.78□□□□□ -1.16
CDK5RAP3-209ENST00000578663 IL12RB1P42701 662 aa7.78□□□□□ -1.16
CDK5RAP3-209ENST00000578663 PTGER3P43115 390 aa7.78□□□□□ -1.16
CDK5RAP3-209ENST00000578663 FOSBP53539 338 aa7.78□□□□□ -1.16
CDK5RAP3-209ENST00000578663 MRPS21P82921 87 aaKnown RBP7.78□□□□□ -1.16
CDK5RAP3-209ENST00000578663 GFPT1Q06210 699 aaPredicted RBP7.78□□□□□ -1.16
CDK5RAP3-209ENST00000578663 USP4Q13107 963 aa7.78□□□□□ -1.16
CDK5RAP3-209ENST00000578663 UBAP2LQ14157 1087 aaKnown RBP7.78□□□□□ -1.16
CDK5RAP3-209ENST00000578663 MTF1Q14872 753 aa7.78□□□□□ -1.16
CDK5RAP3-209ENST00000578663 CRY1Q16526 586 aa7.78□□□□□ -1.16
CDK5RAP3-209ENST00000578663 OVOS1Q6IE37 1185 aa7.78□□□□□ -1.16
CDK5RAP3-209ENST00000578663 PADI6Q6TGC4 694 aa7.78□□□□□ -1.16
CDK5RAP3-209ENST00000578663 MPZL3Q6UWV2 235 aa7.78□□□□□ -1.16
CDK5RAP3-209ENST00000578663 ZNF574Q6ZN55 896 aaPredicted RBP7.78□□□□□ -1.16
CDK5RAP3-209ENST00000578663 PIK3AP1Q6ZUJ8 805 aa7.78□□□□□ -1.16
CDK5RAP3-209ENST00000578663 TMPRSS7Q7RTY8 843 aa7.78□□□□□ -1.16
CDK5RAP3-209ENST00000578663 GLRX5Q86SX6 157 aa7.78□□□□□ -1.16
CDK5RAP3-209ENST00000578663 SLCO6A1Q86UG4 719 aa7.78□□□□□ -1.16
CDK5RAP3-209ENST00000578663 MINDY1Q8N5J2 469 aa7.78□□□□□ -1.16
CDK5RAP3-209ENST00000578663 TTC9BQ8N6N2 239 aa7.78□□□□□ -1.16
CDK5RAP3-209ENST00000578663 C2orf15Q8WU43 125 aaKnown RBP7.78□□□□□ -1.16
CDK5RAP3-209ENST00000578663 OSCP1Q8WVF1 389 aa7.78□□□□□ -1.16
CDK5RAP3-209ENST00000578663 C18orf25Q96B23 403 aaPredicted RBP7.78□□□□□ -1.16
CDK5RAP3-209ENST00000578663 CAMK1GQ96NX5 476 aa7.78□□□□□ -1.16
CDK5RAP3-209ENST00000578663 FNBP1Q96RU3 617 aa7.78□□□□□ -1.16
CDK5RAP3-209ENST00000578663 ARID3AQ99856 593 aa7.78□□□□□ -1.16
CDK5RAP3-209ENST00000578663 KIFC3Q9BVG8 833 aa7.78□□□□□ -1.16
CDK5RAP3-209ENST00000578663 MRPL4Q9BYD3 311 aaKnown RBP7.78□□□□□ -1.16
CDK5RAP3-209ENST00000578663 SMG9Q9H0W8 520 aaKnown RBP7.78□□□□□ -1.16
CDK5RAP3-209ENST00000578663 TMEM206Q9H813 350 aa7.78□□□□□ -1.16
Retrieved 100 of 20,778 RNA–protein pairs in 23.5 ms