RNA–Protein interactions for RNA: ENST00000578557.1

PPP4R1-210, Transcript of protein phosphatase 4 regulatory subunit 1, humanhuman

TSL 4

Gene PPP4R1, Length 571 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PPP4R1-210ENST00000578557 ADAM12O43184 909 aa9.15□□□□□ -0.94
PPP4R1-210ENST00000578557 GADD45BO75293 160 aaPredicted RBP9.15□□□□□ -0.94
PPP4R1-210ENST00000578557 RFPL2O75678 378 aa9.15□□□□□ -0.94
PPP4R1-210ENST00000578557 RTN3O95197 1032 aaPredicted RBP9.15□□□□□ -0.94
PPP4R1-210ENST00000578557 CAVIN2O95810 425 aa9.15□□□□□ -0.94
PPP4R1-210ENST00000578557 TPM2P07951 284 aa9.15□□□□□ -0.94
PPP4R1-210ENST00000578557 SPATA31D3P0C874 917 aa9.15□□□□□ -0.94
PPP4R1-210ENST00000578557 PTPN1P18031 435 aaKnown RBP9.15□□□□□ -0.94
PPP4R1-210ENST00000578557 ANXA13P27216 316 aa9.15□□□□□ -0.94
PPP4R1-210ENST00000578557 MXI1P50539 228 aa9.15□□□□□ -0.94
PPP4R1-210ENST00000578557 MYL6P60660 151 aa9.15□□□□□ -0.94
PPP4R1-210ENST00000578557 ZXDAP98168 799 aa9.15□□□□□ -0.94
PPP4R1-210ENST00000578557 AMPD2Q01433 879 aa9.15□□□□□ -0.94
PPP4R1-210ENST00000578557 TWF1Q12792 350 aa9.15□□□□□ -0.94
PPP4R1-210ENST00000578557 STILQ15468 1287 aa9.15□□□□□ -0.94
PPP4R1-210ENST00000578557 TPD52L1Q16890 204 aaPredicted RBP9.15□□□□□ -0.94
PPP4R1-210ENST00000578557 MGAT5BQ3V5L5 792 aa9.15□□□□□ -0.94
PPP4R1-210ENST00000578557 CCDC40Q4G0X9 1142 aa9.15□□□□□ -0.94
PPP4R1-210ENST00000578557 TMEM31Q5JXX7 168 aa9.15□□□□□ -0.94
PPP4R1-210ENST00000578557 TDRD10Q5VZ19 366 aaKnown RBP9.15□□□□□ -0.94
PPP4R1-210ENST00000578557 SPATA31D4Q6ZUB0 917 aa9.15□□□□□ -0.94
PPP4R1-210ENST00000578557 DNAJB7Q7Z6W7 309 aaPredicted RBP9.15□□□□□ -0.94
PPP4R1-210ENST00000578557 GLYCTKQ8IVS8 523 aa9.15□□□□□ -0.94
PPP4R1-210ENST00000578557 PDZD8Q8NEN9 1154 aa9.15□□□□□ -0.94
PPP4R1-210ENST00000578557 DEPDC1BQ8WUY9 529 aa9.15□□□□□ -0.94
PPP4R1-210ENST00000578557 NELFBQ8WX92 580 aa9.15□□□□□ -0.94
PPP4R1-210ENST00000578557 ELSPBP1Q96BH3 223 aa9.15□□□□□ -0.94
PPP4R1-210ENST00000578557 SYT15Q9BQS2 421 aa9.15□□□□□ -0.94
PPP4R1-210ENST00000578557 NAT10Q9H0A0 1025 aaKnown RBP9.15□□□□□ -0.94
PPP4R1-210ENST00000578557 IKZF4Q9H2S9 585 aa9.15□□□□□ -0.94
PPP4R1-210ENST00000578557 ZFP14Q9HCL3 533 aa9.15□□□□□ -0.94
PPP4R1-210ENST00000578557 LMBRD1Q9NUN5 540 aa9.15□□□□□ -0.94
PPP4R1-210ENST00000578557 TMEM51Q9NW97 253 aa9.15□□□□□ -0.94
PPP4R1-210ENST00000578557 DNMT3BQ9UBC3 853 aaKnown RBP9.15□□□□□ -0.94
PPP4R1-210ENST00000578557 POLIQ9UNA4 740 aa9.15□□□□□ -0.94
PPP4R1-210ENST00000578557 YIPF1Q9Y548 306 aa9.15□□□□□ -0.94
PPP4R1-210ENST00000578557 PRRC2BQ5JSZ5 2229 aaKnown RBP9.15□□□□□ -0.95
PPP4R1-210ENST00000578557 PTPRSQ13332 1948 aa9.14□□□□□ -0.95
PPP4R1-210ENST00000578557 WDR81Q562E7 1941 aa9.14□□□□□ -0.95
PPP4R1-210ENST00000578557 GTPBP10A4D1E9 387 aaKnown RBP9.14□□□□□ -0.95
PPP4R1-210ENST00000578557 C2CD4DB7Z1M9 353 aa9.14□□□□□ -0.95
PPP4R1-210ENST00000578557 PPEF2O14830 753 aa9.14□□□□□ -0.95
PPP4R1-210ENST00000578557 CCL16O15467 120 aa9.14□□□□□ -0.95
PPP4R1-210ENST00000578557 SEC24AO95486 1093 aa9.14□□□□□ -0.95
PPP4R1-210ENST00000578557 HLA-DRAP01903 254 aa9.14□□□□□ -0.95
PPP4R1-210ENST00000578557 CD46P15529 392 aa9.14□□□□□ -0.95
PPP4R1-210ENST00000578557 PIK3CAP42336 1068 aa9.14□□□□□ -0.95
PPP4R1-210ENST00000578557 CASP4P49662 377 aa9.14□□□□□ -0.95
PPP4R1-210ENST00000578557 GUCY2FP51841 1108 aa9.14□□□□□ -0.95
PPP4R1-210ENST00000578557 NLRP12P59046 1061 aa9.14□□□□□ -0.95
PPP4R1-210ENST00000578557 NOP14P78316 857 aaKnown RBP9.14□□□□□ -0.95
PPP4R1-210ENST00000578557 RBM10P98175 930 aaKnown RBP9.14□□□□□ -0.95
PPP4R1-210ENST00000578557 INCA1Q0VD86 236 aa9.14□□□□□ -0.95
PPP4R1-210ENST00000578557 SKOR2Q2VWA4 1001 aaPredicted RBP9.14□□□□□ -0.95
PPP4R1-210ENST00000578557 TCERG1LQ5VWI1 586 aa9.14□□□□□ -0.95
PPP4R1-210ENST00000578557 TTI2Q6NXR4 508 aa9.14□□□□□ -0.95
PPP4R1-210ENST00000578557 SASS6Q6UVJ0 657 aa9.14□□□□□ -0.95
PPP4R1-210ENST00000578557 TRIM67Q6ZTA4 783 aa9.14□□□□□ -0.95
PPP4R1-210ENST00000578557 B3GALNT2Q8NCR0 500 aa9.14□□□□□ -0.95
PPP4R1-210ENST00000578557 ZSWIM2Q8NEG5 633 aa9.14□□□□□ -0.95
PPP4R1-210ENST00000578557 CCDC26Q8TAB7 109 aa9.14□□□□□ -0.95
PPP4R1-210ENST00000578557 FAM200AQ8TCP9 573 aa9.14□□□□□ -0.95
PPP4R1-210ENST00000578557 FGF13Q92913 245 aa9.14□□□□□ -0.95
PPP4R1-210ENST00000578557 CHAMP1Q96JM3 812 aa9.14□□□□□ -0.95
PPP4R1-210ENST00000578557 CORO1BQ9BR76 489 aa9.14□□□□□ -0.95
PPP4R1-210ENST00000578557 REPIN1Q9BWE0 567 aaKnown RBP9.14□□□□□ -0.95
PPP4R1-210ENST00000578557 NT5C1AQ9BXI3 368 aa9.14□□□□□ -0.95
PPP4R1-210ENST00000578557 BCO2Q9BYV7 579 aa9.14□□□□□ -0.95
PPP4R1-210ENST00000578557 NIF3L1Q9GZT8 377 aa9.14□□□□□ -0.95
PPP4R1-210ENST00000578557 FBXO44Q9H4M3 255 aa9.14□□□□□ -0.95
PPP4R1-210ENST00000578557 THAP9Q9H5L6 903 aa9.14□□□□□ -0.95
PPP4R1-210ENST00000578557 KIF9Q9HAQ2 790 aa9.14□□□□□ -0.95
PPP4R1-210ENST00000578557 KCNK12Q9HB15 430 aa9.14□□□□□ -0.95
PPP4R1-210ENST00000578557 SLC2A4RGQ9NR83 387 aa9.14□□□□□ -0.95
PPP4R1-210ENST00000578557 THG1LQ9NWX6 298 aaKnown RBP9.14□□□□□ -0.95
PPP4R1-210ENST00000578557 NXF1Q9UBU9 619 aaKnown RBP9.14□□□□□ -0.95
PPP4R1-210ENST00000578557 LIMD1Q9UGP4 676 aa9.14□□□□□ -0.95
PPP4R1-210ENST00000578557 GTF3C4Q9UKN8 822 aa9.14□□□□□ -0.95
PPP4R1-210ENST00000578557 UTP18Q9Y5J1 556 aaKnown RBP eCLIP9.14□□□□□ -0.95
PPP4R1-210ENST00000578557 COL6A3P12111 3177 aa9.14□□□□□ -0.95
PPP4R1-210ENST00000578557 NCAM2O15394 837 aa9.13□□□□□ -0.95
PPP4R1-210ENST00000578557 SRFP11831 508 aa9.13□□□□□ -0.95
PPP4R1-210ENST00000578557 MAGEA9P43362 315 aa9.13□□□□□ -0.95
PPP4R1-210ENST00000578557 GCNT1Q02742 428 aa9.13□□□□□ -0.95
PPP4R1-210ENST00000578557 PRKCQQ04759 706 aa9.13□□□□□ -0.95
PPP4R1-210ENST00000578557 ZNF268Q14587 947 aaPredicted RBP9.13□□□□□ -0.95
PPP4R1-210ENST00000578557 MEA1Q16626 185 aa9.13□□□□□ -0.95
PPP4R1-210ENST00000578557 PRSS36Q5K4E3 855 aa9.13□□□□□ -0.95
PPP4R1-210ENST00000578557 RBM43Q6ZSC3 357 aaKnown RBP9.13□□□□□ -0.95
PPP4R1-210ENST00000578557 TADA2BQ86TJ2 420 aa9.13□□□□□ -0.95
PPP4R1-210ENST00000578557 LRRTM3Q86VH5 581 aa9.13□□□□□ -0.95
PPP4R1-210ENST00000578557 PARP9Q8IXQ6 854 aa9.13□□□□□ -0.95
PPP4R1-210ENST00000578557 SLC44A3Q8N4M1 653 aa9.13□□□□□ -0.95
PPP4R1-210ENST00000578557 ATAD1Q8NBU5 361 aa9.13□□□□□ -0.95
PPP4R1-210ENST00000578557 STKLD1Q8NE28 680 aa9.13□□□□□ -0.95
PPP4R1-210ENST00000578557 ANKRD20A12PQ8NF67 263 aa9.13□□□□□ -0.95
PPP4R1-210ENST00000578557 OR10T2Q8NGX3 314 aa9.13□□□□□ -0.95
PPP4R1-210ENST00000578557 ENOX1Q8TC92 643 aaKnown RBP9.13□□□□□ -0.95
PPP4R1-210ENST00000578557 KBTBD7Q8WVZ9 684 aa9.13□□□□□ -0.95
PPP4R1-210ENST00000578557 MRPS31Q92665 395 aaKnown RBP9.13□□□□□ -0.95
Retrieved 100 of 20,778 RNA–protein pairs in 23 ms