RNA–Protein interactions for RNA: ENST00000578516.1

CDC42EP4-203, Transcript of CDC42 effector protein 4, humanhuman

TSL 4

Gene CDC42EP4, Length 572 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42EP4-203ENST00000578516 RRAGAQ7L523 313 aa23.13■■□□□ 1.29
CDC42EP4-203ENST00000578516 SCN4BQ8IWT1 228 aa23.13■■□□□ 1.29
CDC42EP4-203ENST00000578516 ADHFE1Q8IWW8 467 aa23.13■■□□□ 1.29
CDC42EP4-203ENST00000578516 DHX40Q8IX18 779 aaKnown RBP23.13■■□□□ 1.29
CDC42EP4-203ENST00000578516 C12orf29Q8N999 325 aa23.13■■□□□ 1.29
CDC42EP4-203ENST00000578516 MYCBPAPQ8TBZ2 947 aa23.13■■□□□ 1.29
CDC42EP4-203ENST00000578516 NT5C1BQ96P26 610 aa23.13■■□□□ 1.29
CDC42EP4-203ENST00000578516 TUBGCP2Q9BSJ2 902 aa23.13■■□□□ 1.29
CDC42EP4-203ENST00000578516 CISHQ9NSE2 258 aa23.13■■□□□ 1.29
CDC42EP4-203ENST00000578516 FAM50BQ9Y247 325 aa23.13■■□□□ 1.29
CDC42EP4-203ENST00000578516 ANAPC1Q9H1A4 1944 aa23.13■■□□□ 1.29
CDC42EP4-203ENST00000578516 XYLBO75191 536 aa23.12■■□□□ 1.29
CDC42EP4-203ENST00000578516 KRT31Q15323 416 aa23.12■■□□□ 1.29
CDC42EP4-203ENST00000578516 NFE2Q16621 373 aaPredicted RBP23.12■■□□□ 1.29
CDC42EP4-203ENST00000578516 PAQR9Q6ZVX9 377 aa23.12■■□□□ 1.29
CDC42EP4-203ENST00000578516 TMC8Q8IU68 726 aa23.12■■□□□ 1.29
CDC42EP4-203ENST00000578516 UBR7Q8N806 425 aa23.12■■□□□ 1.29
CDC42EP4-203ENST00000578516 EHBP1Q8NDI1 1231 aa23.12■■□□□ 1.29
CDC42EP4-203ENST00000578516 FAM200AQ8TCP9 573 aa23.12■■□□□ 1.29
CDC42EP4-203ENST00000578516 KREMEN1Q96MU8 473 aa23.12■■□□□ 1.29
CDC42EP4-203ENST00000578516 NECTIN4Q96NY8 510 aa23.12■■□□□ 1.29
CDC42EP4-203ENST00000578516 CYP3A43Q9HB55 503 aa23.12■■□□□ 1.29
CDC42EP4-203ENST00000578516 PES1O00541 588 aaKnown RBP23.11■■□□□ 1.29
CDC42EP4-203ENST00000578516 PMM2O15305 246 aa23.11■■□□□ 1.29
CDC42EP4-203ENST00000578516 MYL4P12829 197 aa23.11■■□□□ 1.29
CDC42EP4-203ENST00000578516 ATP1A3P13637 1013 aa23.11■■□□□ 1.29
CDC42EP4-203ENST00000578516 CEBPBP17676 345 aa23.11■■□□□ 1.29
CDC42EP4-203ENST00000578516 PLD1Q13393 1074 aa23.11■■□□□ 1.29
CDC42EP4-203ENST00000578516 PABPC1LQ4VXU2 614 aaKnown RBP23.11■■□□□ 1.29
CDC42EP4-203ENST00000578516 VWA3BQ502W6 1294 aa23.11■■□□□ 1.29
CDC42EP4-203ENST00000578516 PHLDB3Q6NSJ2 640 aa23.11■■□□□ 1.29
CDC42EP4-203ENST00000578516 FAM35AQ86V20 835 aa23.11■■□□□ 1.29
CDC42EP4-203ENST00000578516 PPM1KQ8N3J5 372 aa23.11■■□□□ 1.29
CDC42EP4-203ENST00000578516 KHSRPQ92945 711 aaKnown RBP eCLIP23.11■■□□□ 1.29
CDC42EP4-203ENST00000578516 VPS16Q9H269 839 aa23.11■■□□□ 1.29
CDC42EP4-203ENST00000578516 VCANP13611 3396 aa23.11■■□□□ 1.29
CDC42EP4-203ENST00000578516 P4HA2O15460 535 aa23.1■■□□□ 1.29
CDC42EP4-203ENST00000578516 MOSPD3O75425 235 aa23.1■■□□□ 1.29
CDC42EP4-203ENST00000578516 FAM163BP0C2L3 166 aa23.1■■□□□ 1.29
CDC42EP4-203ENST00000578516 FSHRP23945 695 aa23.1■■□□□ 1.29
CDC42EP4-203ENST00000578516 ADORA2BP29275 332 aa23.1■■□□□ 1.29
CDC42EP4-203ENST00000578516 SSTR3P32745 418 aaPredicted RBP23.1■■□□□ 1.29
CDC42EP4-203ENST00000578516 ALDH1A3P47895 512 aa23.1■■□□□ 1.29
CDC42EP4-203ENST00000578516 FUKQ8N0W3 1084 aa23.1■■□□□ 1.29
CDC42EP4-203ENST00000578516 C2orf15Q8WU43 125 aaKnown RBP23.1■■□□□ 1.29
CDC42EP4-203ENST00000578516 MED10Q9BTT4 135 aa23.1■■□□□ 1.29
CDC42EP4-203ENST00000578516 LRRC3Q9BY71 257 aa23.1■■□□□ 1.29
CDC42EP4-203ENST00000578516 NDST4Q9H3R1 872 aa23.1■■□□□ 1.29
CDC42EP4-203ENST00000578516 SIX2Q9NPC8 291 aa23.1■■□□□ 1.29
CDC42EP4-203ENST00000578516 C19orf67A6NJJ6 358 aa23.09■■□□□ 1.29
CDC42EP4-203ENST00000578516 LOC730098B7Z3J9 87 aa23.09■■□□□ 1.29
CDC42EP4-203ENST00000578516 POU2F2P09086 479 aa23.09■■□□□ 1.29
CDC42EP4-203ENST00000578516 ZNF18P17022 549 aa23.09■■□□□ 1.29
CDC42EP4-203ENST00000578516 GBP2P32456 591 aaPredicted RBP23.09■■□□□ 1.29
CDC42EP4-203ENST00000578516 RAD23BP54727 409 aa23.09■■□□□ 1.29
CDC42EP4-203ENST00000578516 EPHB3P54753 998 aa23.09■■□□□ 1.29
CDC42EP4-203ENST00000578516 SKOR2Q2VWA4 1001 aaPredicted RBP23.09■■□□□ 1.29
CDC42EP4-203ENST00000578516 CFAP221Q4G0U5 840 aa23.09■■□□□ 1.29
CDC42EP4-203ENST00000578516 PRSS36Q5K4E3 855 aa23.09■■□□□ 1.29
CDC42EP4-203ENST00000578516 TRIM65Q6PJ69 517 aa23.09■■□□□ 1.29
CDC42EP4-203ENST00000578516 C4orf50Q6ZRC1 276 aa23.09■■□□□ 1.29
CDC42EP4-203ENST00000578516 SLC4A11Q8NBS3 891 aa23.09■■□□□ 1.29
CDC42EP4-203ENST00000578516 SLC2A14Q8TDB8 520 aa23.09■■□□□ 1.29
CDC42EP4-203ENST00000578516 NT5C1AQ9BXI3 368 aa23.09■■□□□ 1.29
CDC42EP4-203ENST00000578516 KRT82Q9NSB4 513 aa23.09■■□□□ 1.29
CDC42EP4-203ENST00000578516 MAFFQ9ULX9 164 aa23.09■■□□□ 1.29
CDC42EP4-203ENST00000578516 F8VP50 259 aa23.08■■□□□ 1.29
CDC42EP4-203ENST00000578516 BEST1O76090 585 aa23.08■■□□□ 1.29
CDC42EP4-203ENST00000578516 PTPN2P17706 415 aa23.08■■□□□ 1.29
CDC42EP4-203ENST00000578516 ACO1P21399 889 aaKnown RBP23.08■■□□□ 1.29
CDC42EP4-203ENST00000578516 EEF1GP26641 437 aaKnown RBP23.08■■□□□ 1.29
CDC42EP4-203ENST00000578516 KLK7P49862 253 aa23.08■■□□□ 1.29
CDC42EP4-203ENST00000578516 ZNF165P49910 485 aa23.08■■□□□ 1.29
CDC42EP4-203ENST00000578516 KCNMA1Q12791 1236 aa23.08■■□□□ 1.29
CDC42EP4-203ENST00000578516 SMARCB1Q12824 385 aa23.08■■□□□ 1.29
CDC42EP4-203ENST00000578516 IQCB1Q15051 598 aa23.08■■□□□ 1.29
CDC42EP4-203ENST00000578516 PTPN21Q16825 1174 aa23.08■■□□□ 1.29
CDC42EP4-203ENST00000578516 STXBP5Q5T5C0 1151 aa23.08■■□□□ 1.29
CDC42EP4-203ENST00000578516 DNAJB7Q7Z6W7 309 aaPredicted RBP23.08■■□□□ 1.29
CDC42EP4-203ENST00000578516 UNC93AQ86WB7 457 aa23.08■■□□□ 1.29
CDC42EP4-203ENST00000578516 TDRD5Q8NAT2 981 aaKnown RBP23.08■■□□□ 1.29
CDC42EP4-203ENST00000578516 TNIP3Q96KP6 325 aa23.08■■□□□ 1.29
CDC42EP4-203ENST00000578516 ZNF512Q96ME7 567 aaPredicted RBP23.08■■□□□ 1.29
CDC42EP4-203ENST00000578516 CBX8Q9HC52 389 aa23.08■■□□□ 1.29
CDC42EP4-203ENST00000578516 ABCB6Q9NP58 842 aa23.08■■□□□ 1.29
CDC42EP4-203ENST00000578516 MAGED2Q9UNF1 606 aaPredicted RBP23.08■■□□□ 1.29
CDC42EP4-203ENST00000578516 RNF225M0QZC1 329 aaPredicted RBP23.07■■□□□ 1.28
CDC42EP4-203ENST00000578516 ASGR2P07307 311 aa23.07■■□□□ 1.28
CDC42EP4-203ENST00000578516 HMGA1P17096 107 aaKnown RBP23.07■■□□□ 1.28
CDC42EP4-203ENST00000578516 PON1P27169 355 aa23.07■■□□□ 1.28
CDC42EP4-203ENST00000578516 TUFMP49411 452 aaKnown RBP23.07■■□□□ 1.28
CDC42EP4-203ENST00000578516 COPB1P53618 953 aaKnown RBP23.07■■□□□ 1.28
CDC42EP4-203ENST00000578516 DPY19L2P1Q6NXN4 242 aa23.07■■□□□ 1.28
CDC42EP4-203ENST00000578516 CYP26C1Q6V0L0 522 aa23.07■■□□□ 1.28
CDC42EP4-203ENST00000578516 GBP6Q6ZN66 633 aa23.07■■□□□ 1.28
CDC42EP4-203ENST00000578516 RTL10Q7L3V2 364 aa23.07■■□□□ 1.28
CDC42EP4-203ENST00000578516 APTXQ7Z2E3 356 aaKnown RBP23.07■■□□□ 1.28
CDC42EP4-203ENST00000578516 LUZP1Q86V48 1076 aa23.07■■□□□ 1.28
CDC42EP4-203ENST00000578516 NPAS3Q8IXF0 933 aa23.07■■□□□ 1.28
CDC42EP4-203ENST00000578516 CRYBG2Q8N1P7 616 aa23.07■■□□□ 1.28
Retrieved 100 of 20,778 RNA–protein pairs in 44.1 ms