RNA–Protein interactions for RNA: ENST00000577210.5

COPS3-213, Transcript of COP9 signalosome subunit 3, humanhuman

TSL 3

Gene COPS3, Length 752 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COPS3-213ENST00000577210 TM7SF3Q9NS93 570 aa3.05□□□□□ -1.92
COPS3-213ENST00000577210 CTTNBP2NLQ9P2B4 639 aa3.05□□□□□ -1.92
COPS3-213ENST00000577210 HSFX1Q9UBD0 423 aa3.05□□□□□ -1.92
COPS3-213ENST00000577210 CPNE7Q9UBL6 633 aa3.05□□□□□ -1.92
COPS3-213ENST00000577210 HDAC9Q9UKV0 1011 aa3.05□□□□□ -1.92
COPS3-213ENST00000577210 SLC45A2Q9UMX9 530 aa3.05□□□□□ -1.92
COPS3-213ENST00000577210 SH2B3Q9UQQ2 575 aa3.05□□□□□ -1.92
COPS3-213ENST00000577210 AATKQ6ZMQ8 1374 aa3.04□□□□□ -1.92
COPS3-213ENST00000577210 USP19O94966 1318 aa3.04□□□□□ -1.92
COPS3-213ENST00000577210 LOC102724159A0A0B4J2E5 919 aa3.04□□□□□ -1.92
COPS3-213ENST00000577210 POM121BA6NF01 834 aa3.04□□□□□ -1.92
COPS3-213ENST00000577210 APOL1O14791 398 aa3.04□□□□□ -1.92
COPS3-213ENST00000577210 MPPED1O15442 326 aa3.04□□□□□ -1.92
COPS3-213ENST00000577210 PROM1O43490 865 aa3.04□□□□□ -1.92
COPS3-213ENST00000577210 PEX1O43933 1283 aa3.04□□□□□ -1.92
COPS3-213ENST00000577210 FZD7O75084 574 aa3.04□□□□□ -1.92
COPS3-213ENST00000577210 VPS4BO75351 444 aa3.04□□□□□ -1.92
COPS3-213ENST00000577210 EIF3JO75822 258 aaKnown RBP3.04□□□□□ -1.92
COPS3-213ENST00000577210 FGF18O76093 207 aa3.04□□□□□ -1.92
COPS3-213ENST00000577210 PRSS23O95084 383 aa3.04□□□□□ -1.92
COPS3-213ENST00000577210 MT-ND5P03915 603 aa3.04□□□□□ -1.92
COPS3-213ENST00000577210 ELANEP08246 267 aa3.04□□□□□ -1.92
COPS3-213ENST00000577210 DLDP09622 509 aaKnown RBP3.04□□□□□ -1.92
COPS3-213ENST00000577210 SETSIPP0DME0 302 aa3.04□□□□□ -1.92
COPS3-213ENST00000577210 CD19P15391 556 aa3.04□□□□□ -1.92
COPS3-213ENST00000577210 ACVR2AP27037 513 aa3.04□□□□□ -1.92
COPS3-213ENST00000577210 MTHFSP49914 203 aa3.04□□□□□ -1.92
COPS3-213ENST00000577210 CPT1AP50416 773 aa3.04□□□□□ -1.92
COPS3-213ENST00000577210 PDE6CP51160 858 aa3.04□□□□□ -1.92
COPS3-213ENST00000577210 NEK3P51956 506 aa3.04□□□□□ -1.92
COPS3-213ENST00000577210 PRKAG1P54619 331 aa3.04□□□□□ -1.92
COPS3-213ENST00000577210 RHBDL3P58872 404 aa3.04□□□□□ -1.92
COPS3-213ENST00000577210 RPS16P62249 146 aaKnown RBP3.04□□□□□ -1.92
COPS3-213ENST00000577210 KRT72Q14CN4 511 aa3.04□□□□□ -1.92
COPS3-213ENST00000577210 PWP2Q15269 919 aaKnown RBP3.04□□□□□ -1.92
COPS3-213ENST00000577210 CDSNQ15517 529 aa3.04□□□□□ -1.92
COPS3-213ENST00000577210 ARL13BQ3SXY8 428 aa3.04□□□□□ -1.92
COPS3-213ENST00000577210 PLA1AQ53H76 456 aa3.04□□□□□ -1.92
COPS3-213ENST00000577210 RBM20Q5T481 1227 aaKnown RBP3.04□□□□□ -1.92
COPS3-213ENST00000577210 CERCAMQ5T4B2 595 aa3.04□□□□□ -1.92
COPS3-213ENST00000577210 SYCP2LQ5T4T6 812 aa3.04□□□□□ -1.92
COPS3-213ENST00000577210 ARL6IP4Q66PJ3 421 aaKnown RBP3.04□□□□□ -1.92
COPS3-213ENST00000577210 DENND2CQ68D51 928 aa3.04□□□□□ -1.92
COPS3-213ENST00000577210 IL31Q6EBC2 164 aa3.04□□□□□ -1.92
COPS3-213ENST00000577210 MTHFD1LQ6UB35 978 aa3.04□□□□□ -1.92
COPS3-213ENST00000577210 TMEM108Q6UXF1 575 aa3.04□□□□□ -1.92
COPS3-213ENST00000577210 SLC30A10Q6XR72 485 aa3.04□□□□□ -1.92
COPS3-213ENST00000577210 RINLQ6ZS11 566 aa3.04□□□□□ -1.92
COPS3-213ENST00000577210 RHOUQ7L0Q8 258 aa3.04□□□□□ -1.92
COPS3-213ENST00000577210 KRT28Q7Z3Y7 464 aa3.04□□□□□ -1.92
COPS3-213ENST00000577210 TMPRSS9Q7Z410 1059 aa3.04□□□□□ -1.92
COPS3-213ENST00000577210 SESTD1Q86VW0 696 aa3.04□□□□□ -1.92
COPS3-213ENST00000577210 MICU3Q86XE3 530 aa3.04□□□□□ -1.92
COPS3-213ENST00000577210 SLC15A3Q8IY34 581 aa3.04□□□□□ -1.92
COPS3-213ENST00000577210 Q8NA96 180 aa3.04□□□□□ -1.92
COPS3-213ENST00000577210 NGDNQ8NEJ9 315 aaKnown RBP3.04□□□□□ -1.92
COPS3-213ENST00000577210 SUPT20HQ8NEM7 779 aa3.04□□□□□ -1.92
COPS3-213ENST00000577210 TMEM125Q96AQ2 219 aa3.04□□□□□ -1.92
COPS3-213ENST00000577210 FAM136AQ96C01 138 aa3.04□□□□□ -1.92
COPS3-213ENST00000577210 MPHOSPH6Q99547 160 aaKnown RBP3.04□□□□□ -1.92
COPS3-213ENST00000577210 ZSWIM1Q9BR11 485 aa3.04□□□□□ -1.92
COPS3-213ENST00000577210 NAA15Q9BXJ9 866 aaKnown RBP3.04□□□□□ -1.92
COPS3-213ENST00000577210 STK31Q9BXU1 1019 aa3.04□□□□□ -1.92
COPS3-213ENST00000577210 TPSD1Q9BZJ3 242 aa3.04□□□□□ -1.92
COPS3-213ENST00000577210 TTYH3Q9C0H2 523 aa3.04□□□□□ -1.92
COPS3-213ENST00000577210 UNKLQ9H9P5 680 aaKnown RBP3.04□□□□□ -1.92
COPS3-213ENST00000577210 CASS4Q9NQ75 786 aa3.04□□□□□ -1.92
COPS3-213ENST00000577210 TRIM36Q9NQ86 728 aa3.04□□□□□ -1.92
COPS3-213ENST00000577210 HEYLQ9NQ87 328 aaPredicted RBP3.04□□□□□ -1.92
COPS3-213ENST00000577210 STK32BQ9NY57 414 aa3.04□□□□□ -1.92
COPS3-213ENST00000577210 COL20A1Q9P218 1284 aa3.04□□□□□ -1.92
COPS3-213ENST00000577210 DKK2Q9UBU2 259 aa3.04□□□□□ -1.92
COPS3-213ENST00000577210 ITGB1BP2Q9UKP3 347 aa3.04□□□□□ -1.92
COPS3-213ENST00000577210 CORO2BQ9UQ03 480 aa3.04□□□□□ -1.92
COPS3-213ENST00000577210 M0R3H8 397 aa3.03□□□□□ -1.92
COPS3-213ENST00000577210 PSMD9O00233 223 aa3.03□□□□□ -1.92
COPS3-213ENST00000577210 KPNA5O15131 536 aa3.03□□□□□ -1.92
COPS3-213ENST00000577210 RGS10O43665 173 aa3.03□□□□□ -1.92
COPS3-213ENST00000577210 SNX2O60749 519 aa3.03□□□□□ -1.92
COPS3-213ENST00000577210 ZNF202O95125 648 aa3.03□□□□□ -1.92
COPS3-213ENST00000577210 C1SP09871 688 aa3.03□□□□□ -1.92
COPS3-213ENST00000577210 EGR2P11161 476 aaPredicted RBP3.03□□□□□ -1.92
COPS3-213ENST00000577210 TNFSF4P23510 183 aa3.03□□□□□ -1.92
COPS3-213ENST00000577210 EPHA3P29320 983 aa3.03□□□□□ -1.92
COPS3-213ENST00000577210 PIK3CBP42338 1070 aa3.03□□□□□ -1.92
COPS3-213ENST00000577210 TECP42680 631 aa3.03□□□□□ -1.92
COPS3-213ENST00000577210 ALDH9A1P49189 494 aa3.03□□□□□ -1.92
COPS3-213ENST00000577210 PRIM2P49643 509 aa3.03□□□□□ -1.92
COPS3-213ENST00000577210 ALDH5A1P51649 535 aaPredicted RBP3.03□□□□□ -1.92
COPS3-213ENST00000577210 DGKEP52429 567 aa3.03□□□□□ -1.92
COPS3-213ENST00000577210 COPAP53621 1224 aa3.03□□□□□ -1.92
COPS3-213ENST00000577210 PTTG1IPP53801 180 aa3.03□□□□□ -1.92
COPS3-213ENST00000577210 POLE2P56282 527 aa3.03□□□□□ -1.92
COPS3-213ENST00000577210 SLC25A3Q00325 362 aa3.03□□□□□ -1.92
COPS3-213ENST00000577210 CCNIQ14094 377 aa3.03□□□□□ -1.92
COPS3-213ENST00000577210 PTPRRQ15256 657 aa3.03□□□□□ -1.92
COPS3-213ENST00000577210 PDCD2Q16342 344 aaPredicted RBP3.03□□□□□ -1.92
COPS3-213ENST00000577210 GEN1Q17RS7 908 aa3.03□□□□□ -1.92
COPS3-213ENST00000577210 C3orf38Q5JPI3 329 aa3.03□□□□□ -1.92
COPS3-213ENST00000577210 ZNF618Q5T7W0 954 aa3.03□□□□□ -1.92
Retrieved 100 of 20,778 RNA–protein pairs in 22.2 ms