RNA–Protein interactions for RNA: ENST00000576708.5

NUP88-212, Transcript of nucleoporin 88, humanhuman

TSL 5

Gene NUP88, Length 800 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP88-212ENST00000576708 GOLGA2P5Q9HBQ8 144 aa6.84□□□□□ -1.31
NUP88-212ENST00000576708 DDX19AQ9NUU7 478 aaKnown RBP6.84□□□□□ -1.31
NUP88-212ENST00000576708 KBTBD4Q9NVX7 518 aa6.84□□□□□ -1.31
NUP88-212ENST00000576708 STK39Q9UEW8 545 aa6.84□□□□□ -1.31
NUP88-212ENST00000576708 LRWD1Q9UFC0 647 aa6.84□□□□□ -1.31
NUP88-212ENST00000576708 CA14Q9ULX7 337 aa6.84□□□□□ -1.31
NUP88-212ENST00000576708 PCDHB6Q9Y5E3 794 aa6.84□□□□□ -1.31
NUP88-212ENST00000576708 TDRD15B5MCY1 1934 aaKnown RBP6.84□□□□□ -1.32
NUP88-212ENST00000576708 SF3B1O75533 1304 aaKnown RBP eCLIP6.83□□□□□ -1.32
NUP88-212ENST00000576708 MEGF11A6BM72 1044 aa6.83□□□□□ -1.32
NUP88-212ENST00000576708 SCAMP3O14828 347 aaKnown RBP6.83□□□□□ -1.32
NUP88-212ENST00000576708 CCL16O15467 120 aa6.83□□□□□ -1.32
NUP88-212ENST00000576708 THP07101 528 aa6.83□□□□□ -1.32
NUP88-212ENST00000576708 NAMPTP43490 491 aa6.83□□□□□ -1.32
NUP88-212ENST00000576708 BRCC3P46736 316 aa6.83□□□□□ -1.32
NUP88-212ENST00000576708 PREPP48147 710 aa6.83□□□□□ -1.32
NUP88-212ENST00000576708 PEX3P56589 373 aa6.83□□□□□ -1.32
NUP88-212ENST00000576708 OSTNP61366 133 aa6.83□□□□□ -1.32
NUP88-212ENST00000576708 GNL2Q13823 731 aaKnown RBP6.83□□□□□ -1.32
NUP88-212ENST00000576708 LRRC14Q15048 493 aa6.83□□□□□ -1.32
NUP88-212ENST00000576708 PSMD5Q16401 504 aa6.83□□□□□ -1.32
NUP88-212ENST00000576708 KCNK18Q7Z418 384 aa6.83□□□□□ -1.32
NUP88-212ENST00000576708 GRASPQ7Z6J2 395 aaPredicted RBP6.83□□□□□ -1.32
NUP88-212ENST00000576708 FRMD5Q7Z6J6 570 aa6.83□□□□□ -1.32
NUP88-212ENST00000576708 DAW1Q8N136 415 aa6.83□□□□□ -1.32
NUP88-212ENST00000576708 FAM184AQ8NB25 1140 aa6.83□□□□□ -1.32
NUP88-212ENST00000576708 PHC3Q8NDX5 983 aa6.83□□□□□ -1.32
NUP88-212ENST00000576708 TTPALQ9BTX7 342 aa6.83□□□□□ -1.32
NUP88-212ENST00000576708 C2orf40Q9H1Z8 148 aa6.83□□□□□ -1.32
NUP88-212ENST00000576708 CYP4F12Q9HCS2 524 aa6.83□□□□□ -1.32
NUP88-212ENST00000576708 APOBEC3CQ9NRW3 190 aaKnown RBP eCLIP6.83□□□□□ -1.32
NUP88-212ENST00000576708 FNIP2Q9P278 1114 aa6.83□□□□□ -1.32
NUP88-212ENST00000576708 EPS15L1Q9UBC2 864 aa6.83□□□□□ -1.32
NUP88-212ENST00000576708 FBXL21Q9UKT6 434 aa6.83□□□□□ -1.32
NUP88-212ENST00000576708 DUSP12Q9UNI6 340 aa6.83□□□□□ -1.32
NUP88-212ENST00000576708 CYP8B1Q9UNU6 501 aa6.83□□□□□ -1.32
NUP88-212ENST00000576708 AP4E1Q9UPM8 1137 aa6.83□□□□□ -1.32
NUP88-212ENST00000576708 COL4A3Q01955 1670 aa6.82□□□□□ -1.32
NUP88-212ENST00000576708 CCDC169A6NNP5 214 aa6.82□□□□□ -1.32
NUP88-212ENST00000576708 K7ERI5 159 aa6.82□□□□□ -1.32
NUP88-212ENST00000576708 MEFVO15553 781 aaPredicted RBP6.82□□□□□ -1.32
NUP88-212ENST00000576708 SART1O43290 800 aaKnown RBP6.82□□□□□ -1.32
NUP88-212ENST00000576708 PF4P02776 101 aa6.82□□□□□ -1.32
NUP88-212ENST00000576708 C8AP07357 584 aa6.82□□□□□ -1.32
NUP88-212ENST00000576708 HARSP12081 509 aaKnown RBP6.82□□□□□ -1.32
NUP88-212ENST00000576708 LAMP2P13473 410 aa6.82□□□□□ -1.32
NUP88-212ENST00000576708 AOC1P19801 751 aa6.82□□□□□ -1.32
NUP88-212ENST00000576708 TKTP29401 623 aaKnown RBP6.82□□□□□ -1.32
NUP88-212ENST00000576708 OR1D2P34982 312 aa6.82□□□□□ -1.32
NUP88-212ENST00000576708 CLCN5P51795 746 aa6.82□□□□□ -1.32
NUP88-212ENST00000576708 CLCNKBP51801 687 aa6.82□□□□□ -1.32
NUP88-212ENST00000576708 FAM160A1Q05DH4 1040 aa6.82□□□□□ -1.32
NUP88-212ENST00000576708 SOX4Q06945 474 aaPredicted RBP6.82□□□□□ -1.32
NUP88-212ENST00000576708 RAD51AP2Q09MP3 1159 aa6.82□□□□□ -1.32
NUP88-212ENST00000576708 DOC2BQ14184 412 aa6.82□□□□□ -1.32
NUP88-212ENST00000576708 ZRSR1Q15695 479 aaKnown RBP6.82□□□□□ -1.32
NUP88-212ENST00000576708 SEZ6Q53EL9 994 aa6.82□□□□□ -1.32
NUP88-212ENST00000576708 ZNF394Q53GI3 561 aa6.82□□□□□ -1.32
NUP88-212ENST00000576708 HP1BP3Q5SSJ5 553 aaPredicted RBP6.82□□□□□ -1.32
NUP88-212ENST00000576708 ATF7IP2Q5U623 682 aa6.82□□□□□ -1.32
NUP88-212ENST00000576708 HAUS3Q68CZ6 603 aa6.82□□□□□ -1.32
NUP88-212ENST00000576708 ANKRD34AQ69YU3 496 aa6.82□□□□□ -1.32
NUP88-212ENST00000576708 PDZRN4Q6ZMN7 1036 aaPredicted RBP6.82□□□□□ -1.32
NUP88-212ENST00000576708 Q6ZS46 218 aa6.82□□□□□ -1.32
NUP88-212ENST00000576708 ERMP1Q7Z2K6 904 aa6.82□□□□□ -1.32
NUP88-212ENST00000576708 ITFG1Q8TB96 612 aa6.82□□□□□ -1.32
NUP88-212ENST00000576708 HDAC7Q8WUI4 952 aa6.82□□□□□ -1.32
NUP88-212ENST00000576708 RNF34Q969K3 372 aa6.82□□□□□ -1.32
NUP88-212ENST00000576708 ZBTB45Q96K62 511 aaPredicted RBP6.82□□□□□ -1.32
NUP88-212ENST00000576708 IFT74Q96LB3 600 aa6.82□□□□□ -1.32
NUP88-212ENST00000576708 ZSCAN31Q96LW9 406 aaPredicted RBP6.82□□□□□ -1.32
NUP88-212ENST00000576708 ZMAT2Q96NC0 199 aaKnown RBP6.82□□□□□ -1.32
NUP88-212ENST00000576708 TMEM74Q96NL1 305 aa6.82□□□□□ -1.32
NUP88-212ENST00000576708 PPP1R10Q96QC0 940 aaKnown RBP6.82□□□□□ -1.32
NUP88-212ENST00000576708 PLIN2Q99541 437 aa6.82□□□□□ -1.32
NUP88-212ENST00000576708 ADPGKQ9BRR6 497 aa6.82□□□□□ -1.32
NUP88-212ENST00000576708 MMTAG2Q9BU76 263 aaKnown RBP6.82□□□□□ -1.32
NUP88-212ENST00000576708 RSRP1Q9BUV0 290 aa6.82□□□□□ -1.32
NUP88-212ENST00000576708 TARS2Q9BW92 718 aaKnown RBP6.82□□□□□ -1.32
NUP88-212ENST00000576708 CDT1Q9H211 546 aa6.82□□□□□ -1.32
NUP88-212ENST00000576708 PLEKHA4Q9H4M7 779 aa6.82□□□□□ -1.32
NUP88-212ENST00000576708 KRT82Q9NSB4 513 aa6.82□□□□□ -1.32
NUP88-212ENST00000576708 HCFC1R1Q9NWW0 138 aa6.82□□□□□ -1.32
NUP88-212ENST00000576708 ZDHHC7Q9NXF8 308 aa6.82□□□□□ -1.32
NUP88-212ENST00000576708 IGSF9Q9P2J2 1179 aa6.82□□□□□ -1.32
NUP88-212ENST00000576708 FBXW11Q9UKB1 542 aa6.82□□□□□ -1.32
NUP88-212ENST00000576708 NOL7Q9UMY1 257 aaKnown RBP6.82□□□□□ -1.32
NUP88-212ENST00000576708 PCDHGB7Q9Y5F8 929 aa6.82□□□□□ -1.32
NUP88-212ENST00000576708 NUMBLQ9Y6R0 609 aa6.82□□□□□ -1.32
NUP88-212ENST00000576708 ZDBF2Q9HCK1 2354 aa6.82□□□□□ -1.32
NUP88-212ENST00000576708 NPHP3-ACAD11A0A0J9YXS1 232 aa6.81□□□□□ -1.32
NUP88-212ENST00000576708 SMIM28A0A1B0GU29 152 aa6.81□□□□□ -1.32
NUP88-212ENST00000576708 ANHXE9PGG2 379 aa6.81□□□□□ -1.32
NUP88-212ENST00000576708 SLC16A4O15374 487 aa6.81□□□□□ -1.32
NUP88-212ENST00000576708 HIP1RO75146 1068 aa6.81□□□□□ -1.32
NUP88-212ENST00000576708 LRRN2O75325 713 aa6.81□□□□□ -1.32
NUP88-212ENST00000576708 B3GAT3O94766 335 aa6.81□□□□□ -1.32
NUP88-212ENST00000576708 PAPLNO95428 1278 aa6.81□□□□□ -1.32
NUP88-212ENST00000576708 DCNP07585 359 aaKnown RBP6.81□□□□□ -1.32
NUP88-212ENST00000576708 ADH5P11766 374 aa6.81□□□□□ -1.32
Retrieved 100 of 20,778 RNA–protein pairs in 18.6 ms