RNA–Protein interactions for RNA: ENST00000576409.5

ATPAF1-214, Transcript of ATP synthase mitochondrial F1 complex assembly factor 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene ATPAF1, Length 4,158 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATPAF1-214ENST00000576409 EFCAB3Q8N7B9 438 aa18.65■□□□□ 0.58
ATPAF1-214ENST00000576409 EXD1Q8NHP7 514 aa18.65■□□□□ 0.58
ATPAF1-214ENST00000576409 ETNPPLQ8TBG4 499 aa18.65■□□□□ 0.58
ATPAF1-214ENST00000576409 SPATA33Q96N06 139 aa18.65■□□□□ 0.58
ATPAF1-214ENST00000576409 PCDHB18PQ96TA0 734 aa18.65■□□□□ 0.58
ATPAF1-214ENST00000576409 FBXO6Q9NRD1 293 aaPredicted RBP18.65■□□□□ 0.58
ATPAF1-214ENST00000576409 DNAJC16Q9Y2G8 782 aa18.65■□□□□ 0.58
ATPAF1-214ENST00000576409 MRPL42Q9Y6G3 142 aaKnown RBP18.65■□□□□ 0.58
ATPAF1-214ENST00000576409 A0A1W2PPM1 405 aa18.65■□□□□ 0.58
ATPAF1-214ENST00000576409 HNRNPCL1O60812 293 aaKnown RBP18.65■□□□□ 0.58
ATPAF1-214ENST00000576409 PAPOLAP51003 745 aaKnown RBP18.65■□□□□ 0.58
ATPAF1-214ENST00000576409 SATB1Q01826 763 aa18.65■□□□□ 0.58
ATPAF1-214ENST00000576409 FAAP100Q0VG06 881 aa18.65■□□□□ 0.58
ATPAF1-214ENST00000576409 DYNC1I2Q13409 638 aaKnown RBP18.65■□□□□ 0.58
ATPAF1-214ENST00000576409 CNBD2Q96M20 576 aa18.65■□□□□ 0.58
ATPAF1-214ENST00000576409 RNPEPL1Q9HAU8 725 aa18.65■□□□□ 0.58
ATPAF1-214ENST00000576409 AJAP1Q9UKB5 411 aaPredicted RBP18.65■□□□□ 0.58
ATPAF1-214ENST00000576409 V9GYQ6 96 aa18.65■□□□□ 0.58
ATPAF1-214ENST00000576409 PEAK1Q9H792 1746 aa18.65■□□□□ 0.58
ATPAF1-214ENST00000576409 UNC5CO95185 931 aa18.65■□□□□ 0.58
ATPAF1-214ENST00000576409 GLRBP48167 497 aa18.65■□□□□ 0.58
ATPAF1-214ENST00000576409 ARPP19P56211 112 aa18.65■□□□□ 0.58
ATPAF1-214ENST00000576409 TTC27Q6P3X3 843 aa18.65■□□□□ 0.58
ATPAF1-214ENST00000576409 CDKL3Q8IVW4 592 aaPredicted RBP18.65■□□□□ 0.58
ATPAF1-214ENST00000576409 FITM2Q8N6M3 262 aa18.65■□□□□ 0.58
ATPAF1-214ENST00000576409 OLFM3Q96PB7 478 aa18.65■□□□□ 0.58
ATPAF1-214ENST00000576409 KRT82Q9NSB4 513 aa18.65■□□□□ 0.58
ATPAF1-214ENST00000576409 PSTPIP1O43586 416 aa18.64■□□□□ 0.58
ATPAF1-214ENST00000576409 GYS1P13807 737 aa18.64■□□□□ 0.58
ATPAF1-214ENST00000576409 NUDT2P50583 147 aa18.64■□□□□ 0.58
ATPAF1-214ENST00000576409 RPL7AP62424 266 aaKnown RBP18.64■□□□□ 0.58
ATPAF1-214ENST00000576409 MTFR1Q15390 333 aa18.64■□□□□ 0.58
ATPAF1-214ENST00000576409 ZNF669Q96BR6 464 aaPredicted RBP18.64■□□□□ 0.58
ATPAF1-214ENST00000576409 WDR18Q9BV38 432 aa18.64■□□□□ 0.58
ATPAF1-214ENST00000576409 CCDC90BQ9GZT6 254 aa18.64■□□□□ 0.58
ATPAF1-214ENST00000576409 TASP1Q9H6P5 420 aa18.64■□□□□ 0.58
ATPAF1-214ENST00000576409 CISHQ9NSE2 258 aa18.64■□□□□ 0.58
ATPAF1-214ENST00000576409 PPP1R12AO14974 1030 aaPredicted RBP18.64■□□□□ 0.57
ATPAF1-214ENST00000576409 KRT36O76013 467 aa18.64■□□□□ 0.57
ATPAF1-214ENST00000576409 SRGAP2BP0DMP2 458 aa18.64■□□□□ 0.57
ATPAF1-214ENST00000576409 TCHHL1Q5QJ38 904 aaPredicted RBP18.64■□□□□ 0.57
ATPAF1-214ENST00000576409 APOBEC3HQ6NTF7 200 aaKnown RBP18.64■□□□□ 0.57
ATPAF1-214ENST00000576409 BZW1Q7L1Q6 419 aaKnown RBP18.64■□□□□ 0.57
ATPAF1-214ENST00000576409 TEX2Q8IWB9 1127 aa18.64■□□□□ 0.57
ATPAF1-214ENST00000576409 ARHGAP26Q9UNA1 814 aa18.64■□□□□ 0.57
ATPAF1-214ENST00000576409 ARHGAP23Q9P227 1491 aa18.64■□□□□ 0.57
ATPAF1-214ENST00000576409 M0QZ92 97 aa18.64■□□□□ 0.57
ATPAF1-214ENST00000576409 DNALI1O14645 258 aaPredicted RBP18.64■□□□□ 0.57
ATPAF1-214ENST00000576409 AP1G2O75843 785 aa18.64■□□□□ 0.57
ATPAF1-214ENST00000576409 ITGB3P05106 788 aa18.64■□□□□ 0.57
ATPAF1-214ENST00000576409 NUDT17P0C025 328 aa18.64■□□□□ 0.57
ATPAF1-214ENST00000576409 KCNA4P22459 653 aa18.64■□□□□ 0.57
ATPAF1-214ENST00000576409 PMLP29590 882 aa18.64■□□□□ 0.57
ATPAF1-214ENST00000576409 ABCD1P33897 745 aa18.64■□□□□ 0.57
ATPAF1-214ENST00000576409 TAP1Q03518 808 aa18.64■□□□□ 0.57
ATPAF1-214ENST00000576409 SLC35G1Q2M3R5 365 aa18.64■□□□□ 0.57
ATPAF1-214ENST00000576409 LRRC57Q8N9N7 239 aa18.64■□□□□ 0.57
ATPAF1-214ENST00000576409 VPS39Q96JC1 886 aa18.64■□□□□ 0.57
ATPAF1-214ENST00000576409 RSAD1Q9HA92 442 aa18.64■□□□□ 0.57
ATPAF1-214ENST00000576409 PAK5Q9P286 719 aa18.64■□□□□ 0.57
ATPAF1-214ENST00000576409 KBTBD13C9JR72 458 aa18.63■□□□□ 0.57
ATPAF1-214ENST00000576409 ENTPD3O75355 529 aa18.63■□□□□ 0.57
ATPAF1-214ENST00000576409 PTDSS1P48651 473 aaKnown RBP18.63■□□□□ 0.57
ATPAF1-214ENST00000576409 TTC39BQ5VTQ0 682 aaPredicted RBP18.63■□□□□ 0.57
ATPAF1-214ENST00000576409 ABRAQ8N0Z2 381 aa18.63■□□□□ 0.57
ATPAF1-214ENST00000576409 CAAP1Q9H8G2 361 aa18.63■□□□□ 0.57
ATPAF1-214ENST00000576409 MCF2P10911 925 aa18.63■□□□□ 0.57
ATPAF1-214ENST00000576409 ACADSP16219 412 aa18.63■□□□□ 0.57
ATPAF1-214ENST00000576409 COPAP53621 1224 aa18.63■□□□□ 0.57
ATPAF1-214ENST00000576409 FMO1Q01740 532 aa18.63■□□□□ 0.57
ATPAF1-214ENST00000576409 CACNB2Q08289 660 aaPredicted RBP18.63■□□□□ 0.57
ATPAF1-214ENST00000576409 C16orf46Q6P387 395 aa18.63■□□□□ 0.57
ATPAF1-214ENST00000576409 CES3Q6UWW8 571 aa18.63■□□□□ 0.57
ATPAF1-214ENST00000576409 SLC39A10Q9ULF5 831 aa18.63■□□□□ 0.57
ATPAF1-214ENST00000576409 KAT6AQ92794 2004 aa18.63■□□□□ 0.57
ATPAF1-214ENST00000576409 MST1RQ04912 1400 aa18.63■□□□□ 0.57
ATPAF1-214ENST00000576409 SIPA1L2Q9P2F8 1722 aaPredicted RBP18.63■□□□□ 0.57
ATPAF1-214ENST00000576409 FAM237BA0A1B0GVD1 139 aa18.63■□□□□ 0.57
ATPAF1-214ENST00000576409 C2orf71A6NGG8 1288 aa18.63■□□□□ 0.57
ATPAF1-214ENST00000576409 FGRP09769 529 aa18.63■□□□□ 0.57
ATPAF1-214ENST00000576409 ABCG1P45844 678 aa18.63■□□□□ 0.57
ATPAF1-214ENST00000576409 VCPP55072 806 aaKnown RBP18.63■□□□□ 0.57
ATPAF1-214ENST00000576409 TSTA3Q13630 321 aaPredicted RBP18.63■□□□□ 0.57
ATPAF1-214ENST00000576409 GLRA4Q5JXX5 417 aa18.63■□□□□ 0.57
ATPAF1-214ENST00000576409 FSD1LQ9BXM9 530 aa18.63■□□□□ 0.57
ATPAF1-214ENST00000576409 RNF19AQ9NV58 838 aa18.63■□□□□ 0.57
ATPAF1-214ENST00000576409 HOXC10Q9NYD6 342 aa18.63■□□□□ 0.57
ATPAF1-214ENST00000576409 GRID1Q9ULK0 1009 aa18.63■□□□□ 0.57
ATPAF1-214ENST00000576409 MAGEA13PA6NCF6 341 aa18.63■□□□□ 0.57
ATPAF1-214ENST00000576409 YWHAHQ04917 246 aaPredicted RBP18.63■□□□□ 0.57
ATPAF1-214ENST00000576409 USP10Q14694 798 aaKnown RBP18.63■□□□□ 0.57
ATPAF1-214ENST00000576409 CERS5Q8N5B7 392 aa18.63■□□□□ 0.57
ATPAF1-214ENST00000576409 ANKEF1Q9NU02 776 aa18.63■□□□□ 0.57
ATPAF1-214ENST00000576409 PCYOX1Q9UHG3 505 aa18.63■□□□□ 0.57
ATPAF1-214ENST00000576409 RBAK-RBAKDNI3L0D1 243 aa18.62■□□□□ 0.57
ATPAF1-214ENST00000576409 EFTUD2Q15029 972 aaKnown RBP eCLIP18.62■□□□□ 0.573e-6■■■■■ 41.9
ATPAF1-214ENST00000576409 PDCD2Q16342 344 aaPredicted RBP18.62■□□□□ 0.57
ATPAF1-214ENST00000576409 EIF1ADQ8N9N8 165 aaKnown RBP18.62■□□□□ 0.57
ATPAF1-214ENST00000576409 CDC26Q8NHZ8 85 aa18.62■□□□□ 0.57
ATPAF1-214ENST00000576409 MID2Q9UJV3 735 aa18.62■□□□□ 0.57
Retrieved 100 of 20,778 RNA–protein pairs in 71 ms