RNA–Protein interactions for RNA: ENST00000576353.5

SNF8-217, Transcript of SNF8, ESCRT-II complex subunit, humanhuman

TSL 5

Gene SNF8, Length 700 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNF8-217ENST00000576353 HFE2Q6ZVN8 426 aa25.06■■□□□ 1.6
SNF8-217ENST00000576353 SCN4BQ8IWT1 228 aa25.06■■□□□ 1.6
SNF8-217ENST00000576353 B3GALNT2Q8NCR0 500 aa25.06■■□□□ 1.6
SNF8-217ENST00000576353 FBXL13Q8NEE6 735 aa25.06■■□□□ 1.6
SNF8-217ENST00000576353 ST13P5Q8NFI4 369 aaPredicted RBP25.06■■□□□ 1.6
SNF8-217ENST00000576353 GPR152Q8TDT2 470 aa25.06■■□□□ 1.6
SNF8-217ENST00000576353 ELMO3Q96BJ8 720 aa25.06■■□□□ 1.6
SNF8-217ENST00000576353 PCED1BQ96HM7 432 aa25.06■■□□□ 1.6
SNF8-217ENST00000576353 GCNAQ96QF7 691 aa25.06■■□□□ 1.6
SNF8-217ENST00000576353 ATXN3LQ9H3M9 355 aa25.06■■□□□ 1.6
SNF8-217ENST00000576353 SLITRK6Q9H5Y7 841 aa25.06■■□□□ 1.6
SNF8-217ENST00000576353 ZNF334Q9HCZ1 680 aaPredicted RBP25.06■■□□□ 1.6
SNF8-217ENST00000576353 NME7Q9Y5B8 376 aa25.06■■□□□ 1.6
SNF8-217ENST00000576353 NOTCH4Q99466 2003 aa25.06■■□□□ 1.6
SNF8-217ENST00000576353 DOCK8Q8NF50 2099 aa25.06■■□□□ 1.6
SNF8-217ENST00000576353 MYO10Q9HD67 2058 aa25.06■■□□□ 1.6
SNF8-217ENST00000576353 ASPAP45381 313 aa25.05■■□□□ 1.6
SNF8-217ENST00000576353 RAP1GAPP47736 663 aa25.05■■□□□ 1.6
SNF8-217ENST00000576353 GPR15P49685 360 aa25.05■■□□□ 1.6
SNF8-217ENST00000576353 NOP14P78316 857 aaKnown RBP25.05■■□□□ 1.6
SNF8-217ENST00000576353 CCDC40Q4G0X9 1142 aa25.05■■□□□ 1.6
SNF8-217ENST00000576353 ARHGAP15Q53QZ3 475 aa25.05■■□□□ 1.6
SNF8-217ENST00000576353 FAM78AQ5JUQ0 283 aa25.05■■□□□ 1.6
SNF8-217ENST00000576353 GAREM2Q75VX8 874 aa25.05■■□□□ 1.6
SNF8-217ENST00000576353 SMARCD2Q92925 531 aa25.05■■□□□ 1.6
SNF8-217ENST00000576353 FAXDC2Q96IV6 333 aa25.05■■□□□ 1.6
SNF8-217ENST00000576353 CEP295NLQ96MC4 621 aa25.05■■□□□ 1.6
SNF8-217ENST00000576353 RPP25Q9BUL9 199 aaKnown RBP25.05■■□□□ 1.6
SNF8-217ENST00000576353 BCO2Q9BYV7 579 aa25.05■■□□□ 1.6
SNF8-217ENST00000576353 SDCBP2Q9H190 292 aa25.05■■□□□ 1.6
SNF8-217ENST00000576353 DPEP3Q9H4B8 488 aa25.05■■□□□ 1.6
SNF8-217ENST00000576353 CYP3A43Q9HB55 503 aa25.05■■□□□ 1.6
SNF8-217ENST00000576353 RAB20Q9NX57 234 aa25.05■■□□□ 1.6
SNF8-217ENST00000576353 NARSO43776 548 aaKnown RBP25.04■■□□□ 1.6
SNF8-217ENST00000576353 TRIM21P19474 475 aaKnown RBP25.04■■□□□ 1.6
SNF8-217ENST00000576353 BDNFP23560 247 aa25.04■■□□□ 1.6
SNF8-217ENST00000576353 GRIK1P39086 918 aa25.04■■□□□ 1.6
SNF8-217ENST00000576353 STX17P56962 302 aa25.04■■□□□ 1.6
SNF8-217ENST00000576353 POTEHQ6S545 545 aa25.04■■□□□ 1.6
SNF8-217ENST00000576353 UNC93AQ86WB7 457 aa25.04■■□□□ 1.6
SNF8-217ENST00000576353 ELSPBP1Q96BH3 223 aa25.04■■□□□ 1.6
SNF8-217ENST00000576353 ZSWIM3Q96MP5 696 aa25.04■■□□□ 1.6
SNF8-217ENST00000576353 ASB16Q96NS5 453 aa25.04■■□□□ 1.6
SNF8-217ENST00000576353 KXD1Q9BQD3 176 aa25.04■■□□□ 1.6
SNF8-217ENST00000576353 NIF3L1Q9GZT8 377 aa25.04■■□□□ 1.6
SNF8-217ENST00000576353 NUP62CLQ9H1M0 184 aa25.04■■□□□ 1.6
SNF8-217ENST00000576353 ZFP14Q9HCL3 533 aa25.04■■□□□ 1.6
SNF8-217ENST00000576353 UTP3Q9NQZ2 479 aaKnown RBP eCLIP25.04■■□□□ 1.6
SNF8-217ENST00000576353 UXTQ9UBK9 157 aaPredicted RBP25.04■■□□□ 1.6
SNF8-217ENST00000576353 WNT16Q9UBV4 365 aa25.04■■□□□ 1.6
SNF8-217ENST00000576353 FBXL21Q9UKT6 434 aa25.04■■□□□ 1.6
SNF8-217ENST00000576353 TECTAO75443 2155 aa25.03■■□□□ 1.6
SNF8-217ENST00000576353 NRG2O14511 850 aaPredicted RBP25.03■■□□□ 1.6
SNF8-217ENST00000576353 FGFR1OPO95684 399 aaKnown RBP25.03■■□□□ 1.6
SNF8-217ENST00000576353 GNA14O95837 355 aa25.03■■□□□ 1.6
SNF8-217ENST00000576353 HMGA1P17096 107 aaKnown RBP25.03■■□□□ 1.6
SNF8-217ENST00000576353 WDR44Q5JSH3 913 aa25.03■■□□□ 1.6
SNF8-217ENST00000576353 SDHAF4Q5VUM1 108 aa25.03■■□□□ 1.6
SNF8-217ENST00000576353 MLKLQ8NB16 471 aa25.03■■□□□ 1.6
SNF8-217ENST00000576353 ZSCAN18Q8TBC5 510 aaPredicted RBP25.03■■□□□ 1.6
SNF8-217ENST00000576353 SLC35C1Q96A29 364 aa25.03■■□□□ 1.6
SNF8-217ENST00000576353 SPATA17Q96L03 361 aa25.03■■□□□ 1.6
SNF8-217ENST00000576353 ELOVL4Q9GZR5 314 aa25.03■■□□□ 1.6
SNF8-217ENST00000576353 IL21Q9HBE4 155 aa25.03■■□□□ 1.6
SNF8-217ENST00000576353 APOBEC3GQ9HC16 384 aaKnown RBP25.03■■□□□ 1.6
SNF8-217ENST00000576353 SLC2A4RGQ9NR83 387 aa25.03■■□□□ 1.6
SNF8-217ENST00000576353 ZMYM5Q9UJ78 669 aa25.03■■□□□ 1.6
SNF8-217ENST00000576353 MAGED2Q9UNF1 606 aaPredicted RBP25.03■■□□□ 1.6
SNF8-217ENST00000576353 SLC38A8A6NNN8 435 aa25.02■■□□□ 1.6
SNF8-217ENST00000576353 TRIM66O15016 1216 aa25.02■■□□□ 1.6
SNF8-217ENST00000576353 NOL4O94818 638 aa25.02■■□□□ 1.6
SNF8-217ENST00000576353 ANXA13P27216 316 aa25.02■■□□□ 1.6
SNF8-217ENST00000576353 TANGO2Q6ICL3 276 aa25.02■■□□□ 1.6
SNF8-217ENST00000576353 SEMA4DQ92854 862 aa25.02■■□□□ 1.6
SNF8-217ENST00000576353 E2F7Q96AV8 911 aa25.02■■□□□ 1.6
SNF8-217ENST00000576353 TRMT2BQ96GJ1 504 aaKnown RBP25.02■■□□□ 1.6
SNF8-217ENST00000576353 MYRFLQ96LU7 910 aa25.02■■□□□ 1.6
SNF8-217ENST00000576353 DNAI2Q9GZS0 605 aa25.02■■□□□ 1.6
SNF8-217ENST00000576353 TRPV4Q9HBA0 871 aa25.02■■□□□ 1.6
SNF8-217ENST00000576353 RWDD2AQ9UIY3 292 aa25.02■■□□□ 1.6
SNF8-217ENST00000576353 COQ4Q9Y3A0 265 aa25.02■■□□□ 1.6
SNF8-217ENST00000576353 ATP8B3O60423 1300 aa25.02■■□□□ 1.6
SNF8-217ENST00000576353 CFHP08603 1231 aa25.01■■□□□ 1.59
SNF8-217ENST00000576353 NDST1P52848 882 aa25.01■■□□□ 1.59
SNF8-217ENST00000576353 CBWD6Q4V339 395 aa25.01■■□□□ 1.59
SNF8-217ENST00000576353 CBWD3Q5JTY5 395 aa25.01■■□□□ 1.59
SNF8-217ENST00000576353 CBWD5Q5RIA9 395 aa25.01■■□□□ 1.59
SNF8-217ENST00000576353 GPR158Q5T848 1215 aa25.01■■□□□ 1.59
SNF8-217ENST00000576353 SUGP1Q8IWZ8 645 aaKnown RBP25.01■■□□□ 1.59
SNF8-217ENST00000576353 CRYBG2Q8N1P7 616 aa25.01■■□□□ 1.59
SNF8-217ENST00000576353 FBXL6Q8N531 539 aa25.01■■□□□ 1.59
SNF8-217ENST00000576353 TTC39CQ8N584 583 aa25.01■■□□□ 1.59
SNF8-217ENST00000576353 C8orf48Q96LL4 319 aa25.01■■□□□ 1.59
SNF8-217ENST00000576353 SRRTQ9BXP5 876 aaKnown RBP25.01■■□□□ 1.59
SNF8-217ENST00000576353 B3GNT5Q9BYG0 378 aa25.01■■□□□ 1.59
SNF8-217ENST00000576353 TASP1Q9H6P5 420 aa25.01■■□□□ 1.59
SNF8-217ENST00000576353 EHD2Q9NZN4 543 aa25.01■■□□□ 1.59
SNF8-217ENST00000576353 F11P03951 625 aa25■■□□□ 1.59
SNF8-217ENST00000576353 FCARP24071 287 aa25■■□□□ 1.59
SNF8-217ENST00000576353 NLRP12P59046 1061 aa25■■□□□ 1.59
Retrieved 100 of 20,778 RNA–protein pairs in 36.1 ms