RNA–Protein interactions for RNA: ENST00000575599.5

RPAIN-216, Transcript of RPA interacting protein, humanhuman

TSL 2

Gene RPAIN, Length 1,359 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPAIN-216ENST00000575599 STKLD1Q8NE28 680 aa14.16□□□□□ -0.14
RPAIN-216ENST00000575599 PSMG2Q969U7 264 aa14.16□□□□□ -0.14
RPAIN-216ENST00000575599 LRFN3Q9BTN0 628 aa14.16□□□□□ -0.14
RPAIN-216ENST00000575599 DPEP3Q9H4B8 488 aa14.16□□□□□ -0.14
RPAIN-216ENST00000575599 OCEL1Q9H607 264 aa14.16□□□□□ -0.14
RPAIN-216ENST00000575599 TMEM8AQ9HCN3 771 aa14.16□□□□□ -0.14
RPAIN-216ENST00000575599 ZNF334Q9HCZ1 680 aaPredicted RBP14.16□□□□□ -0.14
RPAIN-216ENST00000575599 CRTAC1Q9NQ79 661 aa14.16□□□□□ -0.14
RPAIN-216ENST00000575599 NME7Q9Y5B8 376 aa14.16□□□□□ -0.14
RPAIN-216ENST00000575599 A0A1W2PRU2 124 aa14.15□□□□□ -0.14
RPAIN-216ENST00000575599 BICDL2A1A5D9 508 aa14.15□□□□□ -0.14
RPAIN-216ENST00000575599 TMEM221A6NGB7 291 aa14.15□□□□□ -0.14
RPAIN-216ENST00000575599 M0R296 226 aa14.15□□□□□ -0.14
RPAIN-216ENST00000575599 NARSO43776 548 aaKnown RBP14.15□□□□□ -0.14
RPAIN-216ENST00000575599 GPR37L1O60883 481 aa14.15□□□□□ -0.14
RPAIN-216ENST00000575599 ASS1P00966 412 aaKnown RBP14.15□□□□□ -0.14
RPAIN-216ENST00000575599 MXI1P50539 228 aa14.15□□□□□ -0.14
RPAIN-216ENST00000575599 EPHA5P54756 1037 aa14.15□□□□□ -0.14
RPAIN-216ENST00000575599 NOP14P78316 857 aaKnown RBP14.15□□□□□ -0.14
RPAIN-216ENST00000575599 PAK1Q13153 545 aa14.15□□□□□ -0.14
RPAIN-216ENST00000575599 TEAD2Q15562 447 aa14.15□□□□□ -0.14
RPAIN-216ENST00000575599 MDH1BQ5I0G3 518 aa14.15□□□□□ -0.14
RPAIN-216ENST00000575599 SDHAF4Q5VUM1 108 aa14.15□□□□□ -0.14
RPAIN-216ENST00000575599 KRT39Q6A163 491 aa14.15□□□□□ -0.14
RPAIN-216ENST00000575599 TTI2Q6NXR4 508 aa14.15□□□□□ -0.14
RPAIN-216ENST00000575599 FAM171BQ6P995 826 aa14.15□□□□□ -0.14
RPAIN-216ENST00000575599 C4orf50Q6ZRC1 276 aa14.15□□□□□ -0.14
RPAIN-216ENST00000575599 TMC8Q8IU68 726 aa14.15□□□□□ -0.14
RPAIN-216ENST00000575599 CCDC150Q8NCX0 1101 aa14.15□□□□□ -0.14
RPAIN-216ENST00000575599 TAF4BQ92750 862 aa14.15□□□□□ -0.14
RPAIN-216ENST00000575599 FGF14Q92915 247 aa14.15□□□□□ -0.14
RPAIN-216ENST00000575599 KXD1Q9BQD3 176 aa14.15□□□□□ -0.14
RPAIN-216ENST00000575599 KRTAP3-3Q9BYR6 98 aa14.15□□□□□ -0.14
RPAIN-216ENST00000575599 KRTAP3-2Q9BYR7 98 aa14.15□□□□□ -0.14
RPAIN-216ENST00000575599 SDCBP2Q9H190 292 aa14.15□□□□□ -0.14
RPAIN-216ENST00000575599 SLITRK6Q9H5Y7 841 aa14.15□□□□□ -0.14
RPAIN-216ENST00000575599 ABCB6Q9NP58 842 aa14.15□□□□□ -0.14
RPAIN-216ENST00000575599 ASB3Q9Y575 518 aa14.15□□□□□ -0.14
RPAIN-216ENST00000575599 PRR33A8MZF0 331 aa14.14□□□□□ -0.15
RPAIN-216ENST00000575599 ANHXE9PGG2 379 aa14.14□□□□□ -0.15
RPAIN-216ENST00000575599 STX10O60499 249 aa14.14□□□□□ -0.15
RPAIN-216ENST00000575599 MOSPD3O75425 235 aa14.14□□□□□ -0.15
RPAIN-216ENST00000575599 GABRR2P28476 465 aa14.14□□□□□ -0.15
RPAIN-216ENST00000575599 GTF2H1P32780 548 aa14.14□□□□□ -0.15
RPAIN-216ENST00000575599 ASPAP45381 313 aa14.14□□□□□ -0.15
RPAIN-216ENST00000575599 MAPRE1Q15691 268 aaKnown RBP14.14□□□□□ -0.15
RPAIN-216ENST00000575599 DDR2Q16832 855 aa14.14□□□□□ -0.15
RPAIN-216ENST00000575599 CFAP221Q4G0U5 840 aa14.14□□□□□ -0.15
RPAIN-216ENST00000575599 CCDC40Q4G0X9 1142 aa14.14□□□□□ -0.15
RPAIN-216ENST00000575599 RBM43Q6ZSC3 357 aaKnown RBP14.14□□□□□ -0.15
RPAIN-216ENST00000575599 MTSS1LQ765P7 747 aa14.14□□□□□ -0.15
RPAIN-216ENST00000575599 SCN4BQ8IWT1 228 aa14.14□□□□□ -0.15
RPAIN-216ENST00000575599 SHKBP1Q8TBC3 707 aa14.14□□□□□ -0.15
RPAIN-216ENST00000575599 PCED1BQ96HM7 432 aa14.14□□□□□ -0.15
RPAIN-216ENST00000575599 FUBP3Q96I24 572 aaKnown RBP eCLIP14.14□□□□□ -0.15
RPAIN-216ENST00000575599 CEP63Q96MT8 703 aa14.14□□□□□ -0.15
RPAIN-216ENST00000575599 DUSP9Q99956 384 aaKnown RBP14.14□□□□□ -0.15
RPAIN-216ENST00000575599 RPP25Q9BUL9 199 aaKnown RBP14.14□□□□□ -0.15
RPAIN-216ENST00000575599 LRRC3Q9BY71 257 aa14.14□□□□□ -0.15
RPAIN-216ENST00000575599 GDE1Q9NZC3 331 aa14.14□□□□□ -0.15
RPAIN-216ENST00000575599 MAGEC2Q9UBF1 373 aaPredicted RBP14.14□□□□□ -0.15
RPAIN-216ENST00000575599 ARMCX3Q9UH62 379 aaPredicted RBP14.14□□□□□ -0.15
RPAIN-216ENST00000575599 MAGED2Q9UNF1 606 aaPredicted RBP14.14□□□□□ -0.15
RPAIN-216ENST00000575599 DUSP12Q9UNI6 340 aa14.14□□□□□ -0.15
RPAIN-216ENST00000575599 TECTAO75443 2155 aa14.14□□□□□ -0.15
RPAIN-216ENST00000575599 LRRN2O75325 713 aa14.13□□□□□ -0.15
RPAIN-216ENST00000575599 MICAL2O94851 1124 aa14.13□□□□□ -0.15
RPAIN-216ENST00000575599 FAM163BP0C2L3 166 aa14.13□□□□□ -0.15
RPAIN-216ENST00000575599 PTPN1P18031 435 aaKnown RBP14.13□□□□□ -0.15
RPAIN-216ENST00000575599 BDNFP23560 247 aa14.13□□□□□ -0.15
RPAIN-216ENST00000575599 RPL10AP62906 217 aaKnown RBP14.13□□□□□ -0.15
RPAIN-216ENST00000575599 ORC1Q13415 861 aa14.13□□□□□ -0.15
RPAIN-216ENST00000575599 LRSAM1Q6UWE0 723 aa14.13□□□□□ -0.15
RPAIN-216ENST00000575599 HFE2Q6ZVN8 426 aa14.13□□□□□ -0.15
RPAIN-216ENST00000575599 SLC44A3Q8N4M1 653 aa14.13□□□□□ -0.15
RPAIN-216ENST00000575599 B3GALNT2Q8NCR0 500 aa14.13□□□□□ -0.15
RPAIN-216ENST00000575599 MYCBPAPQ8TBZ2 947 aa14.13□□□□□ -0.15
RPAIN-216ENST00000575599 NXPE3Q969Y0 559 aa14.13□□□□□ -0.15
RPAIN-216ENST00000575599 GCNAQ96QF7 691 aa14.13□□□□□ -0.15
RPAIN-216ENST00000575599 ATXN3LQ9H3M9 355 aa14.13□□□□□ -0.15
RPAIN-216ENST00000575599 APOBEC3GQ9HC16 384 aaKnown RBP14.13□□□□□ -0.15
RPAIN-216ENST00000575599 ANO10Q9NW15 660 aa14.13□□□□□ -0.15
RPAIN-216ENST00000575599 FGF19O95750 216 aa14.12□□□□□ -0.15
RPAIN-216ENST00000575599 CFHP08603 1231 aa14.12□□□□□ -0.15
RPAIN-216ENST00000575599 GRIK1P39086 918 aa14.12□□□□□ -0.15
RPAIN-216ENST00000575599 ZNF445P59923 1031 aa14.12□□□□□ -0.15
RPAIN-216ENST00000575599 CYP4F8P98187 520 aa14.12□□□□□ -0.15
RPAIN-216ENST00000575599 TYRO3Q06418 890 aa14.12□□□□□ -0.15
RPAIN-216ENST00000575599 STX1AQ16623 288 aa14.12□□□□□ -0.15
RPAIN-216ENST00000575599 CBWD6Q4V339 395 aa14.12□□□□□ -0.15
RPAIN-216ENST00000575599 CBWD3Q5JTY5 395 aa14.12□□□□□ -0.15
RPAIN-216ENST00000575599 FAM78AQ5JUQ0 283 aa14.12□□□□□ -0.15
RPAIN-216ENST00000575599 CBWD5Q5RIA9 395 aa14.12□□□□□ -0.15
RPAIN-216ENST00000575599 STXBP5Q5T5C0 1151 aa14.12□□□□□ -0.15
RPAIN-216ENST00000575599 GAREM2Q75VX8 874 aa14.12□□□□□ -0.15
RPAIN-216ENST00000575599 FILIP1Q7Z7B0 1213 aa14.12□□□□□ -0.15
RPAIN-216ENST00000575599 FBXL13Q8NEE6 735 aa14.12□□□□□ -0.15
RPAIN-216ENST00000575599 SEMA4DQ92854 862 aa14.12□□□□□ -0.15
RPAIN-216ENST00000575599 PBXIP1Q96AQ6 731 aa14.12□□□□□ -0.15
RPAIN-216ENST00000575599 ASIC4Q96FT7 647 aa14.12□□□□□ -0.15
Retrieved 100 of 20,778 RNA–protein pairs in 49.6 ms