RNA–Protein interactions for RNA: ENST00000575261.5

TVP23B-208, Transcript of trans-golgi network vesicle protein 23 homolog B, humanhuman

TSL 3

Gene TVP23B, Length 697 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TVP23B-208ENST00000575261 ADGRF2Q8IZF7 708 aa11.22□□□□□ -0.61
TVP23B-208ENST00000575261 STKLD1Q8NE28 680 aa11.22□□□□□ -0.61
TVP23B-208ENST00000575261 GAB3Q8WWW8 586 aa11.22□□□□□ -0.61
TVP23B-208ENST00000575261 TRMT2BQ96GJ1 504 aaKnown RBP11.22□□□□□ -0.61
TVP23B-208ENST00000575261 CNTNAP3BQ96NU0 1288 aa11.22□□□□□ -0.61
TVP23B-208ENST00000575261 CNTNAP3Q9BZ76 1288 aa11.22□□□□□ -0.61
TVP23B-208ENST00000575261 MTMR12Q9C0I1 747 aa11.22□□□□□ -0.61
TVP23B-208ENST00000575261 GDAP2Q9NXN4 497 aa11.22□□□□□ -0.61
TVP23B-208ENST00000575261 SNX9Q9Y5X1 595 aa11.22□□□□□ -0.61
TVP23B-208ENST00000575261 TRAV19A0A0A6YYK7 116 aa11.21□□□□□ -0.61
TVP23B-208ENST00000575261 OTOL1A6NHN0 477 aaPredicted RBP11.21□□□□□ -0.61
TVP23B-208ENST00000575261 KIAA0391O15091 583 aaKnown RBP11.21□□□□□ -0.61
TVP23B-208ENST00000575261 RNF40O75150 1001 aa11.21□□□□□ -0.61
TVP23B-208ENST00000575261 RPP40O75818 363 aaKnown RBP11.21□□□□□ -0.61
TVP23B-208ENST00000575261 CKMP06732 381 aa11.21□□□□□ -0.61
TVP23B-208ENST00000575261 ADRB1P08588 477 aa11.21□□□□□ -0.61
TVP23B-208ENST00000575261 CCDC192P0DO97 292 aa11.21□□□□□ -0.61
TVP23B-208ENST00000575261 ARSAP15289 507 aa11.21□□□□□ -0.61
TVP23B-208ENST00000575261 DRD1P21728 446 aa11.21□□□□□ -0.61
TVP23B-208ENST00000575261 CYP2F1P24903 491 aa11.21□□□□□ -0.61
TVP23B-208ENST00000575261 PCSK1P29120 753 aa11.21□□□□□ -0.61
TVP23B-208ENST00000575261 LHX1P48742 406 aa11.21□□□□□ -0.61
TVP23B-208ENST00000575261 RBP5P82980 135 aa11.21□□□□□ -0.61
TVP23B-208ENST00000575261 USP4Q13107 963 aa11.21□□□□□ -0.61
TVP23B-208ENST00000575261 CUL4AQ13619 759 aa11.21□□□□□ -0.61
TVP23B-208ENST00000575261 DDR2Q16832 855 aa11.21□□□□□ -0.61
TVP23B-208ENST00000575261 FBXO43Q4G163 708 aa11.21□□□□□ -0.61
TVP23B-208ENST00000575261 AASDHQ4L235 1098 aaPredicted RBP11.21□□□□□ -0.61
TVP23B-208ENST00000575261 PPM1JQ5JR12 505 aa11.21□□□□□ -0.61
TVP23B-208ENST00000575261 SDHAF4Q5VUM1 108 aa11.21□□□□□ -0.61
TVP23B-208ENST00000575261 SPATA2LQ8IUW3 424 aaPredicted RBP11.21□□□□□ -0.61
TVP23B-208ENST00000575261 CPA6Q8N4T0 437 aa11.21□□□□□ -0.61
TVP23B-208ENST00000575261 CSGALNACT2Q8N6G5 542 aa11.21□□□□□ -0.61
TVP23B-208ENST00000575261 TOP6BLQ8N6T0 577 aa11.21□□□□□ -0.61
TVP23B-208ENST00000575261 FSIP1Q8NA03 581 aa11.21□□□□□ -0.61
TVP23B-208ENST00000575261 ZSWIM2Q8NEG5 633 aa11.21□□□□□ -0.61
TVP23B-208ENST00000575261 RIN3Q8TB24 985 aa11.21□□□□□ -0.61
TVP23B-208ENST00000575261 NOC3LQ8WTT2 800 aaKnown RBP11.21□□□□□ -0.61
TVP23B-208ENST00000575261 DDX1Q92499 740 aaKnown RBP11.21□□□□□ -0.61
TVP23B-208ENST00000575261 CHFRQ96EP1 664 aa11.21□□□□□ -0.61
TVP23B-208ENST00000575261 FUBP3Q96I24 572 aaKnown RBP eCLIP11.21□□□□□ -0.61
TVP23B-208ENST00000575261 ANKRD36BP1Q96IX9 119 aa11.21□□□□□ -0.61
TVP23B-208ENST00000575261 LOXL4Q96JB6 756 aa11.21□□□□□ -0.61
TVP23B-208ENST00000575261 MYRFLQ96LU7 910 aa11.21□□□□□ -0.61
TVP23B-208ENST00000575261 CLIC6Q96NY7 704 aa11.21□□□□□ -0.61
TVP23B-208ENST00000575261 PKMYT1Q99640 499 aa11.21□□□□□ -0.61
TVP23B-208ENST00000575261 CBWD1Q9BRT8 395 aa11.21□□□□□ -0.61
TVP23B-208ENST00000575261 TMEM206Q9H813 350 aa11.21□□□□□ -0.61
TVP23B-208ENST00000575261 TRPC7Q9HCX4 862 aa11.21□□□□□ -0.61
TVP23B-208ENST00000575261 GTF3C4Q9UKN8 822 aa11.21□□□□□ -0.61
TVP23B-208ENST00000575261 SLC8A2Q9UPR5 921 aa11.21□□□□□ -0.61
TVP23B-208ENST00000575261 R3HCC1Q9Y3T6 440 aaKnown RBP11.21□□□□□ -0.61
TVP23B-208ENST00000575261 HELZP42694 1942 aaKnown RBP11.21□□□□□ -0.62
TVP23B-208ENST00000575261 GOLGA8IPA6NC78 632 aa11.2□□□□□ -0.62
TVP23B-208ENST00000575261 GOLGA8JA6NMD2 632 aa11.2□□□□□ -0.62
TVP23B-208ENST00000575261 GDF9O60383 454 aa11.2□□□□□ -0.62
TVP23B-208ENST00000575261 AKAP3O75969 853 aa11.2□□□□□ -0.62
TVP23B-208ENST00000575261 EGFP01133 1207 aa11.2□□□□□ -0.62
TVP23B-208ENST00000575261 USP17L7P0C7H9 530 aa11.2□□□□□ -0.62
TVP23B-208ENST00000575261 HOXC13P31276 330 aa11.2□□□□□ -0.62
TVP23B-208ENST00000575261 GJA4P35212 333 aa11.2□□□□□ -0.62
TVP23B-208ENST00000575261 IFNAR2P48551 515 aa11.2□□□□□ -0.62
TVP23B-208ENST00000575261 PXNP49023 591 aaPredicted RBP11.2□□□□□ -0.62
TVP23B-208ENST00000575261 PDE6CP51160 858 aa11.2□□□□□ -0.62
TVP23B-208ENST00000575261 CEBPZQ03701 1054 aaKnown RBP11.2□□□□□ -0.62
TVP23B-208ENST00000575261 MYO1EQ12965 1108 aa11.2□□□□□ -0.62
TVP23B-208ENST00000575261 RESTQ13127 1097 aa11.2□□□□□ -0.62
TVP23B-208ENST00000575261 ZNF77Q15935 545 aa11.2□□□□□ -0.62
TVP23B-208ENST00000575261 C4orf50Q6ZRC1 276 aa11.2□□□□□ -0.62
TVP23B-208ENST00000575261 STXBP4Q6ZWJ1 553 aa11.2□□□□□ -0.62
TVP23B-208ENST00000575261 CACNA2D4Q7Z3S7 1137 aa11.2□□□□□ -0.62
TVP23B-208ENST00000575261 OSTM1Q86WC4 334 aa11.2□□□□□ -0.62
TVP23B-208ENST00000575261 GPD1LQ8N335 351 aa11.2□□□□□ -0.62
TVP23B-208ENST00000575261 CAMKK1Q8N5S9 505 aa11.2□□□□□ -0.62
TVP23B-208ENST00000575261 C12orf50Q8NA57 414 aaPredicted RBP11.2□□□□□ -0.62
TVP23B-208ENST00000575261 CXorf38Q8TB03 319 aa11.2□□□□□ -0.62
TVP23B-208ENST00000575261 OSCP1Q8WVF1 389 aa11.2□□□□□ -0.62
TVP23B-208ENST00000575261 ATP2A3Q93084 1043 aa11.2□□□□□ -0.62
TVP23B-208ENST00000575261 P2RY13Q9BPV8 354 aa11.2□□□□□ -0.62
TVP23B-208ENST00000575261 PDE11AQ9HCR9 933 aa11.2□□□□□ -0.62
TVP23B-208ENST00000575261 PANK4Q9NVE7 773 aa11.2□□□□□ -0.62
TVP23B-208ENST00000575261 SIX4Q9UIU6 781 aa11.2□□□□□ -0.62
TVP23B-208ENST00000575261 MORC2Q9Y6X9 1032 aaPredicted RBP11.2□□□□□ -0.62
TVP23B-208ENST00000575261 MYO16Q9Y6X6 1858 aa11.19□□□□□ -0.62
TVP23B-208ENST00000575261 KIAA1549LQ6ZVL6 1849 aa11.19□□□□□ -0.62
TVP23B-208ENST00000575261 CEP295Q9C0D2 2601 aa11.19□□□□□ -0.62
TVP23B-208ENST00000575261 GABRDO14764 452 aa11.19□□□□□ -0.62
TVP23B-208ENST00000575261 EPN2O95208 641 aa11.19□□□□□ -0.62
TVP23B-208ENST00000575261 TNNC2P02585 160 aa11.19□□□□□ -0.62
TVP23B-208ENST00000575261 CENPBP07199 599 aaPredicted RBP11.19□□□□□ -0.62
TVP23B-208ENST00000575261 MAGEA11P43364 429 aa11.19□□□□□ -0.62
TVP23B-208ENST00000575261 RAP1GAPP47736 663 aa11.19□□□□□ -0.62
TVP23B-208ENST00000575261 LIMK1P53667 647 aa11.19□□□□□ -0.62
TVP23B-208ENST00000575261 KCNB1Q14721 858 aa11.19□□□□□ -0.62
TVP23B-208ENST00000575261 MAPRE1Q15691 268 aaKnown RBP11.19□□□□□ -0.62
TVP23B-208ENST00000575261 CCDC142Q17RM4 750 aa11.19□□□□□ -0.62
TVP23B-208ENST00000575261 IL31Q6EBC2 164 aa11.19□□□□□ -0.62
TVP23B-208ENST00000575261 FAM173BQ6P4H8 233 aa11.19□□□□□ -0.62
TVP23B-208ENST00000575261 DPH6Q7L8W6 267 aa11.19□□□□□ -0.62
TVP23B-208ENST00000575261 KBTBD6Q86V97 674 aa11.19□□□□□ -0.62
Retrieved 100 of 20,778 RNA–protein pairs in 25 ms