RNA–Protein interactions for RNA: ENST00000574545.1

SCARF1-208, Transcript of scavenger receptor class F member 1, humanhuman

TSL 1 (best)

Gene SCARF1, Length 894 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCARF1-208ENST00000574545 MYRFLQ96LU7 910 aa21.07■□□□□ 0.96
SCARF1-208ENST00000574545 MMS19Q96T76 1030 aa21.07■□□□□ 0.96
SCARF1-208ENST00000574545 LTB4R2Q9NPC1 389 aa21.07■□□□□ 0.96
SCARF1-208ENST00000574545 OBP2AQ9NY56 170 aa21.07■□□□□ 0.96
SCARF1-208ENST00000574545 VPS13AQ96RL7 3174 aa21.06■□□□□ 0.96
SCARF1-208ENST00000574545 DENND4CQ5VZ89 1909 aa21.06■□□□□ 0.96
SCARF1-208ENST00000574545 MAPK13O15264 365 aa21.06■□□□□ 0.96
SCARF1-208ENST00000574545 PDGFRBP09619 1106 aa21.06■□□□□ 0.96
SCARF1-208ENST00000574545 RFX1P22670 979 aa21.06■□□□□ 0.96
SCARF1-208ENST00000574545 MAGEA11P43364 429 aa21.06■□□□□ 0.96
SCARF1-208ENST00000574545 MCCD1P59942 119 aaPredicted RBP21.06■□□□□ 0.96
SCARF1-208ENST00000574545 PSMC1P62191 440 aaKnown RBP21.06■□□□□ 0.96
SCARF1-208ENST00000574545 RPL10AP62906 217 aaKnown RBP21.06■□□□□ 0.96
SCARF1-208ENST00000574545 TRPC3Q13507 836 aa21.06■□□□□ 0.96
SCARF1-208ENST00000574545 ANGPT1Q15389 498 aa21.06■□□□□ 0.96
SCARF1-208ENST00000574545 ARHGAP15Q53QZ3 475 aa21.06■□□□□ 0.96
SCARF1-208ENST00000574545 TPRG1Q6ZUI0 275 aa21.06■□□□□ 0.96
SCARF1-208ENST00000574545 SPATA2LQ8IUW3 424 aaPredicted RBP21.06■□□□□ 0.96
SCARF1-208ENST00000574545 GPIHBP1Q8IV16 184 aa21.06■□□□□ 0.96
SCARF1-208ENST00000574545 TMC2Q8TDI7 906 aa21.06■□□□□ 0.96
SCARF1-208ENST00000574545 CCDC47Q96A33 483 aaKnown RBP21.06■□□□□ 0.96
SCARF1-208ENST00000574545 SOBPA7XYQ1 873 aa21.05■□□□□ 0.96
SCARF1-208ENST00000574545 PROB1E7EW31 1015 aa21.05■□□□□ 0.96
SCARF1-208ENST00000574545 CHADO15335 359 aa21.05■□□□□ 0.96
SCARF1-208ENST00000574545 CALUO43852 315 aaPredicted RBP21.05■□□□□ 0.96
SCARF1-208ENST00000574545 TADA3O75528 432 aa21.05■□□□□ 0.96
SCARF1-208ENST00000574545 KIF20AO95235 890 aa21.05■□□□□ 0.96
SCARF1-208ENST00000574545 PRAMEF12O95522 483 aa21.05■□□□□ 0.96
SCARF1-208ENST00000574545 TARSP26639 723 aaKnown RBP21.05■□□□□ 0.96
SCARF1-208ENST00000574545 GNL1P36915 607 aaPredicted RBP21.05■□□□□ 0.96
SCARF1-208ENST00000574545 NBL1P41271 181 aa21.05■□□□□ 0.96
SCARF1-208ENST00000574545 TAF12Q16514 161 aa21.05■□□□□ 0.96
SCARF1-208ENST00000574545 ZACNQ401N2 412 aa21.05■□□□□ 0.96
SCARF1-208ENST00000574545 ZCWPW2Q504Y3 356 aa21.05■□□□□ 0.96
SCARF1-208ENST00000574545 C4orf50Q6ZRC1 276 aa21.05■□□□□ 0.96
SCARF1-208ENST00000574545 MYCBPAPQ8TBZ2 947 aa21.05■□□□□ 0.96
SCARF1-208ENST00000574545 MYLPFQ96A32 169 aa21.05■□□□□ 0.96
SCARF1-208ENST00000574545 SYAP1Q96A49 352 aaPredicted RBP21.05■□□□□ 0.96
SCARF1-208ENST00000574545 CLDN23Q96B33 292 aa21.05■□□□□ 0.96
SCARF1-208ENST00000574545 TRMT2BQ96GJ1 504 aaKnown RBP21.05■□□□□ 0.96
SCARF1-208ENST00000574545 MAGEC2Q9UBF1 373 aaPredicted RBP21.05■□□□□ 0.96
SCARF1-208ENST00000574545 ZMYM5Q9UJ78 669 aa21.05■□□□□ 0.96
SCARF1-208ENST00000574545 MAPK8IP1Q9UQF2 711 aa21.05■□□□□ 0.96
SCARF1-208ENST00000574545 NUP210Q8TEM1 1887 aaPredicted RBP21.05■□□□□ 0.96
SCARF1-208ENST00000574545 ZFHX2Q9C0A1 2572 aaPredicted RBP21.04■□□□□ 0.96
SCARF1-208ENST00000574545 FAM170BA6NMN3 283 aa21.04■□□□□ 0.96
SCARF1-208ENST00000574545 SLC38A8A6NNN8 435 aa21.04■□□□□ 0.96
SCARF1-208ENST00000574545 IKBKBO14920 756 aa21.04■□□□□ 0.96
SCARF1-208ENST00000574545 ZNF263O14978 683 aa21.04■□□□□ 0.96
SCARF1-208ENST00000574545 AKAP3O75969 853 aa21.04■□□□□ 0.96
SCARF1-208ENST00000574545 TNNC1P63316 161 aa21.04■□□□□ 0.96
SCARF1-208ENST00000574545 NCOA4Q13772 614 aa21.04■□□□□ 0.96
SCARF1-208ENST00000574545 MAPRE1Q15691 268 aaKnown RBP21.04■□□□□ 0.96
SCARF1-208ENST00000574545 VSTM1Q6UX27 236 aa21.04■□□□□ 0.96
SCARF1-208ENST00000574545 PCED1BQ96HM7 432 aa21.04■□□□□ 0.96
SCARF1-208ENST00000574545 NELL2Q99435 816 aa21.04■□□□□ 0.96
SCARF1-208ENST00000574545 MLLT6P55198 1093 aaPredicted RBP21.03■□□□□ 0.96
SCARF1-208ENST00000574545 BIRC3Q13489 604 aa21.03■□□□□ 0.96
SCARF1-208ENST00000574545 PNOCQ13519 176 aa21.03■□□□□ 0.96
SCARF1-208ENST00000574545 UBXN2BQ14CS0 331 aa21.03■□□□□ 0.96
SCARF1-208ENST00000574545 CEP135Q66GS9 1140 aa21.03■□□□□ 0.96
SCARF1-208ENST00000574545 ZNF852Q6ZMS4 543 aa21.03■□□□□ 0.96
SCARF1-208ENST00000574545 SV2AQ7L0J3 742 aa21.03■□□□□ 0.96
SCARF1-208ENST00000574545 CMTM8Q8IZV2 173 aa21.03■□□□□ 0.96
SCARF1-208ENST00000574545 OR6B3Q8NGW1 331 aa21.03■□□□□ 0.96
SCARF1-208ENST00000574545 SPATA20Q8TB22 786 aa21.03■□□□□ 0.96
SCARF1-208ENST00000574545 ELMO3Q96BJ8 720 aa21.03■□□□□ 0.96
SCARF1-208ENST00000574545 SPATA17Q96L03 361 aa21.03■□□□□ 0.96
SCARF1-208ENST00000574545 GCNAQ96QF7 691 aa21.03■□□□□ 0.96
SCARF1-208ENST00000574545 SNX25Q9H3E2 840 aa21.03■□□□□ 0.96
SCARF1-208ENST00000574545 NXF1Q9UBU9 619 aaKnown RBP21.03■□□□□ 0.96
SCARF1-208ENST00000574545 MAGED2Q9UNF1 606 aaPredicted RBP21.03■□□□□ 0.96
SCARF1-208ENST00000574545 PTPRDP23468 1912 aa21.03■□□□□ 0.96
SCARF1-208ENST00000574545 MIA3Q5JRA6 1907 aa21.02■□□□□ 0.96
SCARF1-208ENST00000574545 PHACTR2O75167 634 aa21.02■□□□□ 0.96
SCARF1-208ENST00000574545 PTPN1P18031 435 aaKnown RBP21.02■□□□□ 0.96
SCARF1-208ENST00000574545 BDNFP23560 247 aa21.02■□□□□ 0.96
SCARF1-208ENST00000574545 NR2F2P24468 414 aa21.02■□□□□ 0.96
SCARF1-208ENST00000574545 DDX6P26196 483 aaKnown RBP eCLIP21.02■□□□□ 0.96
SCARF1-208ENST00000574545 CDH8P55286 799 aa21.02■□□□□ 0.96
SCARF1-208ENST00000574545 ENPEPQ07075 957 aa21.02■□□□□ 0.96
SCARF1-208ENST00000574545 TXNDC8Q6A555 127 aa21.02■□□□□ 0.96
SCARF1-208ENST00000574545 MON1AQ86VX9 555 aa21.02■□□□□ 0.96
SCARF1-208ENST00000574545 C1orf210Q8IVY1 113 aa21.02■□□□□ 0.96
SCARF1-208ENST00000574545 SCN4BQ8IWT1 228 aa21.02■□□□□ 0.96
SCARF1-208ENST00000574545 MAML2Q8IZL2 1156 aaPredicted RBP21.02■□□□□ 0.96
SCARF1-208ENST00000574545 CEP295NLQ96MC4 621 aa21.02■□□□□ 0.96
SCARF1-208ENST00000574545 SDCBP2Q9H190 292 aa21.02■□□□□ 0.96
SCARF1-208ENST00000574545 DPEP3Q9H4B8 488 aa21.02■□□□□ 0.96
SCARF1-208ENST00000574545 UXTQ9UBK9 157 aaPredicted RBP21.02■□□□□ 0.96
SCARF1-208ENST00000574545 FRMD4BQ9Y2L6 1034 aa21.02■□□□□ 0.96
SCARF1-208ENST00000574545 OBSL1O75147 1896 aa21.02■□□□□ 0.96
SCARF1-208ENST00000574545 GREB1Q4ZG55 1949 aa21.02■□□□□ 0.95
SCARF1-208ENST00000574545 TICRRQ7Z2Z1 1910 aa21.02■□□□□ 0.95
SCARF1-208ENST00000574545 A8MXQ7 604 aa21.01■□□□□ 0.95
SCARF1-208ENST00000574545 MAN2B1O00754 1011 aa21.01■□□□□ 0.95
SCARF1-208ENST00000574545 FAM160A1Q05DH4 1040 aa21.01■□□□□ 0.95
SCARF1-208ENST00000574545 ADAM9Q13443 819 aa21.01■□□□□ 0.95
SCARF1-208ENST00000574545 ZNF699Q32M78 642 aa21.01■□□□□ 0.95
SCARF1-208ENST00000574545 COBLL1Q53SF7 1204 aa21.01■□□□□ 0.95
Retrieved 100 of 20,778 RNA–protein pairs in 32.6 ms