RNA–Protein interactions for RNA: ENST00000574054.1

CHRNB1-206, Transcript of cholinergic receptor nicotinic beta 1 subunit, humanhuman

TSL 2

Gene CHRNB1, Length 583 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHRNB1-206ENST00000574054 AGPAT3Q9NRZ7 376 aa22.66■■□□□ 1.22
CHRNB1-206ENST00000574054 GKN1Q9NS71 199 aa22.66■■□□□ 1.22
CHRNB1-206ENST00000574054 CCL26Q9Y258 94 aa22.66■■□□□ 1.22
CHRNB1-206ENST00000574054 CLIC2O15247 247 aa22.65■■□□□ 1.22
CHRNB1-206ENST00000574054 LILRB5O75023 590 aa22.65■■□□□ 1.22
CHRNB1-206ENST00000574054 F13A1P00488 732 aa22.65■■□□□ 1.22
CHRNB1-206ENST00000574054 DLATP10515 647 aaKnown RBP22.65■■□□□ 1.22
CHRNB1-206ENST00000574054 TDGF1P13385 188 aa22.65■■□□□ 1.22
CHRNB1-206ENST00000574054 CXCL12P48061 93 aa22.65■■□□□ 1.22
CHRNB1-206ENST00000574054 SNRNP35Q16560 246 aaKnown RBP22.65■■□□□ 1.22
CHRNB1-206ENST00000574054 MAMSTRQ6ZN01 415 aa22.65■■□□□ 1.22
CHRNB1-206ENST00000574054 WDR49Q8IV35 697 aa22.65■■□□□ 1.22
CHRNB1-206ENST00000574054 SPEM1Q8N4L4 309 aa22.65■■□□□ 1.22
CHRNB1-206ENST00000574054 ZNF507Q8TCN5 953 aa22.65■■□□□ 1.22
CHRNB1-206ENST00000574054 USP13Q92995 863 aaPredicted RBP22.65■■□□□ 1.22
CHRNB1-206ENST00000574054 SECISBP2LQ93073 1101 aaKnown RBP22.65■■□□□ 1.22
CHRNB1-206ENST00000574054 SYT15Q9BQS2 421 aa22.65■■□□□ 1.22
CHRNB1-206ENST00000574054 EPC1Q9H2F5 836 aa22.65■■□□□ 1.22
CHRNB1-206ENST00000574054 BLZF1Q9H2G9 400 aa22.65■■□□□ 1.22
CHRNB1-206ENST00000574054 TRPC7Q9HCX4 862 aa22.65■■□□□ 1.22
CHRNB1-206ENST00000574054 FAM13BQ9NYF5 915 aa22.65■■□□□ 1.22
CHRNB1-206ENST00000574054 UXTQ9UBK9 157 aaPredicted RBP22.65■■□□□ 1.22
CHRNB1-206ENST00000574054 GABRDO14764 452 aa22.64■■□□□ 1.21
CHRNB1-206ENST00000574054 ATP2C2O75185 946 aa22.64■■□□□ 1.21
CHRNB1-206ENST00000574054 PSMC1P62191 440 aaKnown RBP22.64■■□□□ 1.21
CHRNB1-206ENST00000574054 GAS6Q14393 721 aa22.64■■□□□ 1.21
CHRNB1-206ENST00000574054 DGKKQ5KSL6 1271 aa22.64■■□□□ 1.21
CHRNB1-206ENST00000574054 Q6ZS52 159 aa22.64■■□□□ 1.21
CHRNB1-206ENST00000574054 UNC13DQ70J99 1090 aa22.64■■□□□ 1.21
CHRNB1-206ENST00000574054 SPRYD3Q8NCJ5 442 aa22.64■■□□□ 1.21
CHRNB1-206ENST00000574054 KBTBD7Q8WVZ9 684 aa22.64■■□□□ 1.21
CHRNB1-206ENST00000574054 FNBP1Q96RU3 617 aa22.64■■□□□ 1.21
CHRNB1-206ENST00000574054 MMS19Q96T76 1030 aa22.64■■□□□ 1.21
CHRNB1-206ENST00000574054 TDP1Q9NUW8 608 aa22.64■■□□□ 1.21
CHRNB1-206ENST00000574054 UBE4BO95155 1302 aa22.63■■□□□ 1.21
CHRNB1-206ENST00000574054 CACNA1AO00555 2505 aa22.63■■□□□ 1.21
CHRNB1-206ENST00000574054 TGFB1I1O43294 461 aa22.63■■□□□ 1.21
CHRNB1-206ENST00000574054 PDGFRBP09619 1106 aa22.63■■□□□ 1.21
CHRNB1-206ENST00000574054 PDIA4P13667 645 aaKnown RBP22.63■■□□□ 1.21
CHRNB1-206ENST00000574054 TNNI1P19237 187 aa22.63■■□□□ 1.21
CHRNB1-206ENST00000574054 AFMP43652 599 aa22.63■■□□□ 1.21
CHRNB1-206ENST00000574054 FOXK2Q01167 660 aa22.63■■□□□ 1.21
CHRNB1-206ENST00000574054 CFAP221Q4G0U5 840 aa22.63■■□□□ 1.21
CHRNB1-206ENST00000574054 WDR44Q5JSH3 913 aa22.63■■□□□ 1.21
CHRNB1-206ENST00000574054 C4orf50Q6ZRC1 276 aa22.63■■□□□ 1.21
CHRNB1-206ENST00000574054 HS2ST1Q7LGA3 356 aa22.63■■□□□ 1.21
CHRNB1-206ENST00000574054 TRAPPC11Q7Z392 1133 aa22.63■■□□□ 1.21
CHRNB1-206ENST00000574054 MON1AQ86VX9 555 aa22.63■■□□□ 1.21
CHRNB1-206ENST00000574054 TTC16Q8NEE8 873 aa22.63■■□□□ 1.21
CHRNB1-206ENST00000574054 SCFD1Q8WVM8 642 aa22.63■■□□□ 1.21
CHRNB1-206ENST00000574054 CCDC127Q96BQ5 260 aa22.63■■□□□ 1.21
CHRNB1-206ENST00000574054 RMDN1Q96DB5 314 aa22.63■■□□□ 1.21
CHRNB1-206ENST00000574054 FUBP3Q96I24 572 aaKnown RBP eCLIP22.63■■□□□ 1.21
CHRNB1-206ENST00000574054 KIF9Q9HAQ2 790 aa22.63■■□□□ 1.21
CHRNB1-206ENST00000574054 CDH9Q9ULB4 789 aa22.63■■□□□ 1.21
CHRNB1-206ENST00000574054 RAB23Q9ULC3 237 aa22.63■■□□□ 1.21
CHRNB1-206ENST00000574054 PCDHA7Q9UN72 937 aa22.63■■□□□ 1.21
CHRNB1-206ENST00000574054 TADA3O75528 432 aa22.62■■□□□ 1.21
CHRNB1-206ENST00000574054 NOL4O94818 638 aa22.62■■□□□ 1.21
CHRNB1-206ENST00000574054 LMO2P25791 158 aa22.62■■□□□ 1.21
CHRNB1-206ENST00000574054 CYP24A1Q07973 514 aa22.62■■□□□ 1.21
CHRNB1-206ENST00000574054 TRIM68Q6AZZ1 485 aa22.62■■□□□ 1.21
CHRNB1-206ENST00000574054 CC2D1AQ6P1N0 951 aaPredicted RBP22.62■■□□□ 1.21
CHRNB1-206ENST00000574054 DPH6Q7L8W6 267 aa22.62■■□□□ 1.21
CHRNB1-206ENST00000574054 XXYLT1Q8NBI6 393 aa22.62■■□□□ 1.21
CHRNB1-206ENST00000574054 TRMT2BQ96GJ1 504 aaKnown RBP22.62■■□□□ 1.21
CHRNB1-206ENST00000574054 CGRRF1Q99675 332 aa22.62■■□□□ 1.21
CHRNB1-206ENST00000574054 EBF3Q9H4W6 596 aa22.62■■□□□ 1.21
CHRNB1-206ENST00000574054 SLC39A2Q9NP94 309 aa22.62■■□□□ 1.21
CHRNB1-206ENST00000574054 MAGEA11P43364 429 aa22.61■■□□□ 1.21
CHRNB1-206ENST00000574054 RUNX3Q13761 415 aa22.61■■□□□ 1.21
CHRNB1-206ENST00000574054 PSMD6Q15008 389 aa22.61■■□□□ 1.21
CHRNB1-206ENST00000574054 LPAL2Q16609 132 aa22.61■■□□□ 1.21
CHRNB1-206ENST00000574054 RESP18Q5W5W9 173 aa22.61■■□□□ 1.21
CHRNB1-206ENST00000574054 FAM171BQ6P995 826 aa22.61■■□□□ 1.21
CHRNB1-206ENST00000574054 ERMP1Q7Z2K6 904 aa22.61■■□□□ 1.21
CHRNB1-206ENST00000574054 LIMS2Q7Z4I7 341 aa22.61■■□□□ 1.21
CHRNB1-206ENST00000574054 GRAMD1CQ8IYS0 662 aa22.61■■□□□ 1.21
CHRNB1-206ENST00000574054 CEP57L1Q8IYX8 460 aa22.61■■□□□ 1.21
CHRNB1-206ENST00000574054 MYLPFQ96A32 169 aa22.61■■□□□ 1.21
CHRNB1-206ENST00000574054 FAM83CQ9BQN1 747 aa22.61■■□□□ 1.21
CHRNB1-206ENST00000574054 SNX25Q9H3E2 840 aa22.61■■□□□ 1.21
CHRNB1-206ENST00000574054 HPS4Q9NQG7 708 aa22.61■■□□□ 1.21
CHRNB1-206ENST00000574054 MAGEC2Q9UBF1 373 aaPredicted RBP22.61■■□□□ 1.21
CHRNB1-206ENST00000574054 SOBPA7XYQ1 873 aa22.6■■□□□ 1.21
CHRNB1-206ENST00000574054 CHURC1-FNTBB4DL54 471 aa22.6■■□□□ 1.21
CHRNB1-206ENST00000574054 CKMP06732 381 aa22.6■■□□□ 1.21
CHRNB1-206ENST00000574054 ARSAP15289 507 aa22.6■■□□□ 1.21
CHRNB1-206ENST00000574054 WARSP23381 471 aaKnown RBP22.6■■□□□ 1.21
CHRNB1-206ENST00000574054 BDNFP23560 247 aa22.6■■□□□ 1.21
CHRNB1-206ENST00000574054 FNTBP49356 437 aa22.6■■□□□ 1.21
CHRNB1-206ENST00000574054 SNRPFP62306 86 aaKnown RBP22.6■■□□□ 1.21
CHRNB1-206ENST00000574054 CYP27A1Q02318 531 aa22.6■■□□□ 1.21
CHRNB1-206ENST00000574054 EHHADHQ08426 723 aa22.6■■□□□ 1.21
CHRNB1-206ENST00000574054 CUL4BQ13620 913 aa22.6■■□□□ 1.21
CHRNB1-206ENST00000574054 PKP1Q13835 747 aa22.6■■□□□ 1.21
CHRNB1-206ENST00000574054 CCINQ13939 588 aa22.6■■□□□ 1.21
CHRNB1-206ENST00000574054 MAPRE1Q15691 268 aaKnown RBP22.6■■□□□ 1.21
CHRNB1-206ENST00000574054 HEATR6Q6AI08 1181 aaKnown RBP22.6■■□□□ 1.21
CHRNB1-206ENST00000574054 PRR23BQ6ZRT6 265 aa22.6■■□□□ 1.21
Retrieved 100 of 20,778 RNA–protein pairs in 16.8 ms