RNA–Protein interactions for RNA: ENST00000572809.1

NUP88-205, Transcript of nucleoporin 88, humanhuman

TSL 3

Gene NUP88, Length 771 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP88-205ENST00000572809 ZDHHC9Q9Y397 364 aa8.03□□□□□ -1.12
NUP88-205ENST00000572809 PVALEFA0A1B0GWK0 134 aa8.02□□□□□ -1.13
NUP88-205ENST00000572809 GOLGA8IPA6NC78 632 aa8.02□□□□□ -1.13
NUP88-205ENST00000572809 OR6C75A6NL08 312 aa8.02□□□□□ -1.13
NUP88-205ENST00000572809 GOLGA8JA6NMD2 632 aa8.02□□□□□ -1.13
NUP88-205ENST00000572809 KPNA7A9QM74 516 aa8.02□□□□□ -1.13
NUP88-205ENST00000572809 ANHXE9PGG2 379 aa8.02□□□□□ -1.13
NUP88-205ENST00000572809 CYB561D2O14569 222 aa8.02□□□□□ -1.13
NUP88-205ENST00000572809 KIAA0391O15091 583 aaKnown RBP8.02□□□□□ -1.13
NUP88-205ENST00000572809 EIF3DO15371 548 aaKnown RBP eCLIP8.02□□□□□ -1.13
NUP88-205ENST00000572809 NARSO43776 548 aaKnown RBP8.02□□□□□ -1.13
NUP88-205ENST00000572809 EXTL3O43909 919 aa8.02□□□□□ -1.13
NUP88-205ENST00000572809 PDGFBP01127 241 aaPredicted RBP8.02□□□□□ -1.13
NUP88-205ENST00000572809 IL2RAP01589 272 aa8.02□□□□□ -1.13
NUP88-205ENST00000572809 RHOP08100 348 aa8.02□□□□□ -1.13
NUP88-205ENST00000572809 ODC1P11926 461 aa8.02□□□□□ -1.13
NUP88-205ENST00000572809 TAF6P49848 677 aa8.02□□□□□ -1.13
NUP88-205ENST00000572809 PSMA6P60900 246 aaKnown RBP8.02□□□□□ -1.13
NUP88-205ENST00000572809 CENPCQ03188 943 aa8.02□□□□□ -1.13
NUP88-205ENST00000572809 CLN3Q13286 438 aa8.02□□□□□ -1.13
NUP88-205ENST00000572809 GPR17Q13304 367 aa8.02□□□□□ -1.13
NUP88-205ENST00000572809 TLR1Q15399 786 aa8.02□□□□□ -1.13
NUP88-205ENST00000572809 FAM26FQ5R3K3 315 aa8.02□□□□□ -1.13
NUP88-205ENST00000572809 IQCEQ6IPM2 695 aa8.02□□□□□ -1.13
NUP88-205ENST00000572809 ARMCX5Q6P1M9 558 aa8.02□□□□□ -1.13
NUP88-205ENST00000572809 CAPN12Q6ZSI9 719 aa8.02□□□□□ -1.13
NUP88-205ENST00000572809 UNC13DQ70J99 1090 aa8.02□□□□□ -1.13
NUP88-205ENST00000572809 METTL23Q86XA0 190 aa8.02□□□□□ -1.13
NUP88-205ENST00000572809 EFCAB13Q8IY85 973 aa8.02□□□□□ -1.13
NUP88-205ENST00000572809 CEP57L1Q8IYX8 460 aa8.02□□□□□ -1.13
NUP88-205ENST00000572809 THEM5Q8N1Q8 247 aa8.02□□□□□ -1.13
NUP88-205ENST00000572809 GPD1LQ8N335 351 aa8.02□□□□□ -1.13
NUP88-205ENST00000572809 ELMOD1Q8N336 334 aa8.02□□□□□ -1.13
NUP88-205ENST00000572809 GLIS3Q8NEA6 775 aa8.02□□□□□ -1.13
NUP88-205ENST00000572809 FGF13Q92913 245 aa8.02□□□□□ -1.13
NUP88-205ENST00000572809 SPATA32Q96LK8 384 aa8.02□□□□□ -1.13
NUP88-205ENST00000572809 ZNF512Q96ME7 567 aaPredicted RBP8.02□□□□□ -1.13
NUP88-205ENST00000572809 PSMG3-AS1Q96PY0 264 aa8.02□□□□□ -1.13
NUP88-205ENST00000572809 CBWD1Q9BRT8 395 aa8.02□□□□□ -1.13
NUP88-205ENST00000572809 C2orf49Q9BVC5 232 aaPredicted RBP8.02□□□□□ -1.13
NUP88-205ENST00000572809 MFSD1Q9H3U5 465 aa8.02□□□□□ -1.13
NUP88-205ENST00000572809 AVENQ9NQS1 362 aaPredicted RBP8.02□□□□□ -1.13
NUP88-205ENST00000572809 RBAKQ9NYW8 714 aaPredicted RBP8.02□□□□□ -1.13
NUP88-205ENST00000572809 FBXL21Q9UKT6 434 aa8.02□□□□□ -1.13
NUP88-205ENST00000572809 DUSP12Q9UNI6 340 aa8.02□□□□□ -1.13
NUP88-205ENST00000572809 MRPS23Q9Y3D9 190 aaKnown RBP8.02□□□□□ -1.13
NUP88-205ENST00000572809 INSL5Q9Y5Q6 135 aa8.02□□□□□ -1.13
NUP88-205ENST00000572809 PDCD11Q14690 1871 aaKnown RBP8.02□□□□□ -1.13
NUP88-205ENST00000572809 DENND4AQ7Z401 1863 aa8.02□□□□□ -1.13
NUP88-205ENST00000572809 A0A1B0GVL5 298 aa8.01□□□□□ -1.13
NUP88-205ENST00000572809 ZNF233A6NK53 670 aa8.01□□□□□ -1.13
NUP88-205ENST00000572809 ZNF197O14709 1029 aa8.01□□□□□ -1.13
NUP88-205ENST00000572809 ITGB3P05106 788 aa8.01□□□□□ -1.13
NUP88-205ENST00000572809 CYP11A1P05108 521 aa8.01□□□□□ -1.13
NUP88-205ENST00000572809 OR4Q2P0C623 313 aa8.01□□□□□ -1.13
NUP88-205ENST00000572809 SLFN14P0C7P3 912 aa8.01□□□□□ -1.13
NUP88-205ENST00000572809 RHOQP17081 205 aa8.01□□□□□ -1.13
NUP88-205ENST00000572809 CMA1P23946 247 aa8.01□□□□□ -1.13
NUP88-205ENST00000572809 CASP1P29466 404 aa8.01□□□□□ -1.13
NUP88-205ENST00000572809 HOXD13P35453 343 aa8.01□□□□□ -1.13
NUP88-205ENST00000572809 PLA2G5P39877 138 aa8.01□□□□□ -1.13
NUP88-205ENST00000572809 CLCN5P51795 746 aa8.01□□□□□ -1.13
NUP88-205ENST00000572809 KRT85P78386 507 aa8.01□□□□□ -1.13
NUP88-205ENST00000572809 TFAMQ00059 246 aaKnown RBP8.01□□□□□ -1.13
NUP88-205ENST00000572809 EHHADHQ08426 723 aa8.01□□□□□ -1.13
NUP88-205ENST00000572809 DUSP4Q13115 394 aa8.01□□□□□ -1.13
NUP88-205ENST00000572809 CUL4BQ13620 913 aa8.01□□□□□ -1.13
NUP88-205ENST00000572809 HTR4Q13639 388 aa8.01□□□□□ -1.13
NUP88-205ENST00000572809 MYBPC2Q14324 1141 aa8.01□□□□□ -1.13
NUP88-205ENST00000572809 SURF1Q15526 300 aa8.01□□□□□ -1.13
NUP88-205ENST00000572809 SV2CQ496J9 727 aa8.01□□□□□ -1.13
NUP88-205ENST00000572809 CYP4A22Q5TCH4 519 aa8.01□□□□□ -1.13
NUP88-205ENST00000572809 C16orf46Q6P387 395 aa8.01□□□□□ -1.13
NUP88-205ENST00000572809 PARM1Q6UWI2 310 aa8.01□□□□□ -1.13
NUP88-205ENST00000572809 DNAJC14Q6Y2X3 702 aaPredicted RBP8.01□□□□□ -1.13
NUP88-205ENST00000572809 EPM2AIP1Q7L775 607 aaPredicted RBP8.01□□□□□ -1.13
NUP88-205ENST00000572809 PRICKLE2Q7Z3G6 844 aa8.01□□□□□ -1.13
NUP88-205ENST00000572809 BRSK2Q8IWQ3 736 aa8.01□□□□□ -1.13
NUP88-205ENST00000572809 CSGALNACT2Q8N6G5 542 aa8.01□□□□□ -1.13
NUP88-205ENST00000572809 ST13P5Q8NFI4 369 aaPredicted RBP8.01□□□□□ -1.13
NUP88-205ENST00000572809 LEO1Q8WVC0 666 aaPredicted RBP8.01□□□□□ -1.13
NUP88-205ENST00000572809 FGF14Q92915 247 aa8.01□□□□□ -1.13
NUP88-205ENST00000572809 ACDQ96AP0 544 aa8.01□□□□□ -1.13
NUP88-205ENST00000572809 ZNF837Q96EG3 531 aaPredicted RBP8.01□□□□□ -1.13
NUP88-205ENST00000572809 MCRS1Q96EZ8 462 aa8.01□□□□□ -1.13
NUP88-205ENST00000572809 BORCS6Q96GS4 357 aa8.01□□□□□ -1.13
NUP88-205ENST00000572809 PGLYRP2Q96PD5 576 aa8.01□□□□□ -1.13
NUP88-205ENST00000572809 PRRX2Q99811 253 aa8.01□□□□□ -1.13
NUP88-205ENST00000572809 CORO1BQ9BR76 489 aa8.01□□□□□ -1.13
NUP88-205ENST00000572809 RPP25Q9BUL9 199 aaKnown RBP8.01□□□□□ -1.13
NUP88-205ENST00000572809 KIAA1586Q9HCI6 787 aa8.01□□□□□ -1.13
NUP88-205ENST00000572809 PDE11AQ9HCR9 933 aa8.01□□□□□ -1.13
NUP88-205ENST00000572809 SLC39A2Q9NP94 309 aa8.01□□□□□ -1.13
NUP88-205ENST00000572809 CEP72Q9P209 647 aa8.01□□□□□ -1.13
NUP88-205ENST00000572809 WNT16Q9UBV4 365 aa8.01□□□□□ -1.13
NUP88-205ENST00000572809 DSEQ9UL01 958 aa8.01□□□□□ -1.13
NUP88-205ENST00000572809 AGAP1Q9UPQ3 857 aa8.01□□□□□ -1.13
NUP88-205ENST00000572809 ATP6V1DQ9Y5K8 247 aa8.01□□□□□ -1.13
NUP88-205ENST00000572809 NUMBLQ9Y6R0 609 aa8.01□□□□□ -1.13
NUP88-205ENST00000572809 MYH15Q9Y2K3 1946 aa8.01□□□□□ -1.13
Retrieved 100 of 20,778 RNA–protein pairs in 50.2 ms