RNA–Protein interactions for RNA: ENST00000572750.1

CHD3-215, Transcript of chromodomain helicase DNA binding protein 3, humanhuman

TSL 3

Gene CHD3, Length 750 nt, Biotype retained intron, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD3-215ENST00000572750 WDR44Q5JSH3 913 aa16.86■□□□□ 0.29
CHD3-215ENST00000572750 CYP26C1Q6V0L0 522 aa16.86■□□□□ 0.29
CHD3-215ENST00000572750 SPATA2LQ8IUW3 424 aaPredicted RBP16.86■□□□□ 0.29
CHD3-215ENST00000572750 FAM114A1Q8IWE2 563 aa16.86■□□□□ 0.29
CHD3-215ENST00000572750 B3GALNT2Q8NCR0 500 aa16.86■□□□□ 0.29
CHD3-215ENST00000572750 STKLD1Q8NE28 680 aa16.86■□□□□ 0.29
CHD3-215ENST00000572750 C2orf15Q8WU43 125 aaKnown RBP16.86■□□□□ 0.29
CHD3-215ENST00000572750 PBXIP1Q96AQ6 731 aa16.86■□□□□ 0.29
CHD3-215ENST00000572750 SAMSN1Q9NSI8 373 aaKnown RBP16.86■□□□□ 0.29
CHD3-215ENST00000572750 CEP72Q9P209 647 aa16.86■□□□□ 0.29
CHD3-215ENST00000572750 DNMT3BQ9UBC3 853 aaKnown RBP16.86■□□□□ 0.29
CHD3-215ENST00000572750 SYCE3A1L190 88 aa16.85■□□□□ 0.29
CHD3-215ENST00000572750 C2CD4DB7Z1M9 353 aa16.85■□□□□ 0.29
CHD3-215ENST00000572750 CYP2F1P24903 491 aa16.85■□□□□ 0.29
CHD3-215ENST00000572750 ALDH1A3P47895 512 aa16.85■□□□□ 0.29
CHD3-215ENST00000572750 GPR15P49685 360 aa16.85■□□□□ 0.29
CHD3-215ENST00000572750 NDST1P52848 882 aa16.85■□□□□ 0.29
CHD3-215ENST00000572750 CYP27A1Q02318 531 aa16.85■□□□□ 0.29
CHD3-215ENST00000572750 INCA1Q0VD86 236 aa16.85■□□□□ 0.29
CHD3-215ENST00000572750 SMARCB1Q12824 385 aa16.85■□□□□ 0.29
CHD3-215ENST00000572750 PLD1Q13393 1074 aa16.85■□□□□ 0.29
CHD3-215ENST00000572750 ANO6Q4KMQ2 910 aa16.85■□□□□ 0.29
CHD3-215ENST00000572750 PABPC1LQ4VXU2 614 aaKnown RBP16.85■□□□□ 0.29
CHD3-215ENST00000572750 FAM171BQ6P995 826 aa16.85■□□□□ 0.29
CHD3-215ENST00000572750 TRIM67Q6ZTA4 783 aa16.85■□□□□ 0.29
CHD3-215ENST00000572750 ELMOD1Q8N336 334 aa16.85■□□□□ 0.29
CHD3-215ENST00000572750 MYCBPAPQ8TBZ2 947 aa16.85■□□□□ 0.29
CHD3-215ENST00000572750 ENOX1Q8TC92 643 aaKnown RBP16.85■□□□□ 0.29
CHD3-215ENST00000572750 TATDN2Q93075 761 aa16.85■□□□□ 0.29
CHD3-215ENST00000572750 PCED1BQ96HM7 432 aa16.85■□□□□ 0.29
CHD3-215ENST00000572750 TWNKQ96RR1 684 aa16.85■□□□□ 0.29
CHD3-215ENST00000572750 CORO1BQ9BR76 489 aa16.85■□□□□ 0.29
CHD3-215ENST00000572750 GCNT4Q9P109 453 aa16.85■□□□□ 0.29
CHD3-215ENST00000572750 HSFX1Q9UBD0 423 aa16.85■□□□□ 0.29
CHD3-215ENST00000572750 MAGEC2Q9UBF1 373 aaPredicted RBP16.85■□□□□ 0.29
CHD3-215ENST00000572750 CFAP47Q6ZTR5 3102 aa16.85■□□□□ 0.29
CHD3-215ENST00000572750 OBSL1O75147 1896 aa16.84■□□□□ 0.29
CHD3-215ENST00000572750 NCOR2Q9Y618 2525 aa16.84■□□□□ 0.29
CHD3-215ENST00000572750 KCNJ18B7U540 433 aa16.84■□□□□ 0.29
CHD3-215ENST00000572750 PMM2O15305 246 aa16.84■□□□□ 0.29
CHD3-215ENST00000572750 RHOP08100 348 aa16.84■□□□□ 0.29
CHD3-215ENST00000572750 FAM163BP0C2L3 166 aa16.84■□□□□ 0.29
CHD3-215ENST00000572750 HAPLN1P10915 354 aaPredicted RBP16.84■□□□□ 0.29
CHD3-215ENST00000572750 PTPN1P18031 435 aaKnown RBP16.84■□□□□ 0.29
CHD3-215ENST00000572750 EPHB3P54753 998 aa16.84■□□□□ 0.29
CHD3-215ENST00000572750 KCNJ12Q14500 433 aa16.84■□□□□ 0.29
CHD3-215ENST00000572750 SLC5A9Q2M3M2 681 aa16.84■□□□□ 0.29
CHD3-215ENST00000572750 SDHAF4Q5VUM1 108 aa16.84■□□□□ 0.29
CHD3-215ENST00000572750 C4orf50Q6ZRC1 276 aa16.84■□□□□ 0.29
CHD3-215ENST00000572750 ACOT1Q86TX2 421 aa16.84■□□□□ 0.29
CHD3-215ENST00000572750 HS6ST3Q8IZP7 471 aa16.84■□□□□ 0.29
CHD3-215ENST00000572750 TDRD5Q8NAT2 981 aaKnown RBP16.84■□□□□ 0.29
CHD3-215ENST00000572750 FAM200AQ8TCP9 573 aa16.84■□□□□ 0.29
CHD3-215ENST00000572750 GPR152Q8TDT2 470 aa16.84■□□□□ 0.29
CHD3-215ENST00000572750 CYP3A43Q9HB55 503 aa16.84■□□□□ 0.29
CHD3-215ENST00000572750 ABCB6Q9NP58 842 aa16.84■□□□□ 0.29
CHD3-215ENST00000572750 PATJQ8NI35 1801 aa16.84■□□□□ 0.29
CHD3-215ENST00000572750 LOC730098B7Z3J9 87 aa16.83■□□□□ 0.28
CHD3-215ENST00000572750 NRG2O14511 850 aaPredicted RBP16.83■□□□□ 0.28
CHD3-215ENST00000572750 P4HA2O15460 535 aa16.83■□□□□ 0.28
CHD3-215ENST00000572750 CCDC130P13994 396 aa16.83■□□□□ 0.28
CHD3-215ENST00000572750 PRKCSHP14314 528 aaPredicted RBP16.83■□□□□ 0.28
CHD3-215ENST00000572750 BDNFP23560 247 aa16.83■□□□□ 0.28
CHD3-215ENST00000572750 FSHRP23945 695 aa16.83■□□□□ 0.28
CHD3-215ENST00000572750 TUFMP49411 452 aaKnown RBP16.83■□□□□ 0.28
CHD3-215ENST00000572750 MYL5Q02045 173 aa16.83■□□□□ 0.28
CHD3-215ENST00000572750 CETN1Q12798 172 aa16.83■□□□□ 0.28
CHD3-215ENST00000572750 CUL2Q13617 745 aa16.83■□□□□ 0.28
CHD3-215ENST00000572750 MAPRE1Q15691 268 aaKnown RBP16.83■□□□□ 0.28
CHD3-215ENST00000572750 MAN2A1Q16706 1144 aa16.83■□□□□ 0.28
CHD3-215ENST00000572750 CFAP221Q4G0U5 840 aa16.83■□□□□ 0.28
CHD3-215ENST00000572750 IQCEQ6IPM2 695 aa16.83■□□□□ 0.28
CHD3-215ENST00000572750 AOPEPQ8N6M6 819 aa16.83■□□□□ 0.28
CHD3-215ENST00000572750 LMO3Q8TAP4 145 aa16.83■□□□□ 0.28
CHD3-215ENST00000572750 ITFG1Q8TB96 612 aa16.83■□□□□ 0.28
CHD3-215ENST00000572750 GIPC2Q8TF65 315 aa16.83■□□□□ 0.28
CHD3-215ENST00000572750 ING5Q8WYH8 240 aa16.83■□□□□ 0.28
CHD3-215ENST00000572750 FUBP3Q96I24 572 aaKnown RBP eCLIP16.83■□□□□ 0.28
CHD3-215ENST00000572750 MYADMQ96S97 322 aa16.83■□□□□ 0.28
CHD3-215ENST00000572750 ZNF518BQ9C0D4 1074 aa16.83■□□□□ 0.28
CHD3-215ENST00000572750 INTS2Q9H0H0 1204 aaKnown RBP16.83■□□□□ 0.28
CHD3-215ENST00000572750 ASAH2Q9NR71 780 aa16.83■□□□□ 0.28
CHD3-215ENST00000572750 CISHQ9NSE2 258 aa16.83■□□□□ 0.28
CHD3-215ENST00000572750 FAM49BQ9NUQ9 324 aa16.83■□□□□ 0.28
CHD3-215ENST00000572750 NR2E1Q9Y466 385 aa16.83■□□□□ 0.28
CHD3-215ENST00000572750 GREB1Q4ZG55 1949 aa16.82■□□□□ 0.28
CHD3-215ENST00000572750 CLDN5O00501 218 aa16.82■□□□□ 0.28
CHD3-215ENST00000572750 CILPO75339 1184 aa16.82■□□□□ 0.28
CHD3-215ENST00000572750 KRT37O76014 449 aa16.82■□□□□ 0.28
CHD3-215ENST00000572750 MYL4P12829 197 aa16.82■□□□□ 0.28
CHD3-215ENST00000572750 CEBPBP17676 345 aa16.82■□□□□ 0.28
CHD3-215ENST00000572750 PTPN2P17706 415 aa16.82■□□□□ 0.28
CHD3-215ENST00000572750 GBP2P32456 591 aaPredicted RBP16.82■□□□□ 0.28
CHD3-215ENST00000572750 CCR2P41597 374 aa16.82■□□□□ 0.28
CHD3-215ENST00000572750 VEPH1Q14D04 833 aa16.82■□□□□ 0.28
CHD3-215ENST00000572750 DDR2Q16832 855 aa16.82■□□□□ 0.28
CHD3-215ENST00000572750 ZNF394Q53GI3 561 aa16.82■□□□□ 0.28
CHD3-215ENST00000572750 TCP11X2Q5H9J9 407 aa16.82■□□□□ 0.28
CHD3-215ENST00000572750 MIIPQ5JXC2 388 aa16.82■□□□□ 0.28
CHD3-215ENST00000572750 CDKAL1Q5VV42 579 aa16.82■□□□□ 0.28
Retrieved 100 of 20,778 RNA–protein pairs in 20.8 ms