RNA–Protein interactions for RNA: ENST00000571442.5

SMG6-209, Transcript of SMG6, nonsense mediated mRNA decay factor, humanhuman

TSL 4

Gene SMG6, Length 588 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMG6-209ENST00000571442 SSTR3P32745 418 aaPredicted RBP7.45□□□□□ -1.22
SMG6-209ENST00000571442 MTHFRP42898 656 aa7.45□□□□□ -1.22
SMG6-209ENST00000571442 RAD23BP54727 409 aa7.45□□□□□ -1.22
SMG6-209ENST00000571442 USP46P62068 366 aa7.45□□□□□ -1.22
SMG6-209ENST00000571442 TSPY1Q01534 308 aa7.45□□□□□ -1.22
SMG6-209ENST00000571442 INCA1Q0VD86 236 aa7.45□□□□□ -1.22
SMG6-209ENST00000571442 KCNJ12Q14500 433 aa7.45□□□□□ -1.22
SMG6-209ENST00000571442 PTPN21Q16825 1174 aa7.45□□□□□ -1.22
SMG6-209ENST00000571442 PUS10Q3MIT2 529 aaKnown RBP7.45□□□□□ -1.22
SMG6-209ENST00000571442 ZNF394Q53GI3 561 aa7.45□□□□□ -1.22
SMG6-209ENST00000571442 TCP11X2Q5H9J9 407 aa7.45□□□□□ -1.22
SMG6-209ENST00000571442 STXBP5Q5T5C0 1151 aa7.45□□□□□ -1.22
SMG6-209ENST00000571442 PHLDB3Q6NSJ2 640 aa7.45□□□□□ -1.22
SMG6-209ENST00000571442 CES5AQ6NT32 575 aa7.45□□□□□ -1.22
SMG6-209ENST00000571442 CCDC149Q6ZUS6 474 aa7.45□□□□□ -1.22
SMG6-209ENST00000571442 RRAGAQ7L523 313 aa7.45□□□□□ -1.22
SMG6-209ENST00000571442 GET4Q7L5D6 327 aaPredicted RBP7.45□□□□□ -1.22
SMG6-209ENST00000571442 TMEM150AQ86TG1 271 aa7.45□□□□□ -1.22
SMG6-209ENST00000571442 DCP1BQ8IZD4 617 aaKnown RBP7.45□□□□□ -1.22
SMG6-209ENST00000571442 FUKQ8N0W3 1084 aa7.45□□□□□ -1.22
SMG6-209ENST00000571442 AOPEPQ8N6M6 819 aa7.45□□□□□ -1.22
SMG6-209ENST00000571442 B3GALNT2Q8NCR0 500 aa7.45□□□□□ -1.22
SMG6-209ENST00000571442 EHBP1Q8NDI1 1231 aa7.45□□□□□ -1.22
SMG6-209ENST00000571442 ZMIZ2Q8NF64 920 aa7.45□□□□□ -1.22
SMG6-209ENST00000571442 MYCBPAPQ8TBZ2 947 aa7.45□□□□□ -1.22
SMG6-209ENST00000571442 SPPL2BQ8TCT7 592 aa7.45□□□□□ -1.22
SMG6-209ENST00000571442 ING5Q8WYH8 240 aa7.45□□□□□ -1.22
SMG6-209ENST00000571442 RIPOR3Q96MK2 946 aa7.45□□□□□ -1.22
SMG6-209ENST00000571442 ZSWIM3Q96MP5 696 aa7.45□□□□□ -1.22
SMG6-209ENST00000571442 ZSWIM1Q9BR11 485 aa7.45□□□□□ -1.22
SMG6-209ENST00000571442 CORO1BQ9BR76 489 aa7.45□□□□□ -1.22
SMG6-209ENST00000571442 RPP25Q9BUL9 199 aaKnown RBP7.45□□□□□ -1.22
SMG6-209ENST00000571442 OXCT2Q9BYC2 517 aaPredicted RBP7.45□□□□□ -1.22
SMG6-209ENST00000571442 INTS2Q9H0H0 1204 aaKnown RBP7.45□□□□□ -1.22
SMG6-209ENST00000571442 SNX25Q9H3E2 840 aa7.45□□□□□ -1.22
SMG6-209ENST00000571442 EPHX3Q9H6B9 360 aa7.45□□□□□ -1.22
SMG6-209ENST00000571442 PIDD1Q9HB75 910 aa7.45□□□□□ -1.22
SMG6-209ENST00000571442 IL21Q9HBE4 155 aa7.45□□□□□ -1.22
SMG6-209ENST00000571442 CISHQ9NSE2 258 aa7.45□□□□□ -1.22
SMG6-209ENST00000571442 ANO10Q9NW15 660 aa7.45□□□□□ -1.22
SMG6-209ENST00000571442 TAB2Q9NYJ8 693 aa7.45□□□□□ -1.22
SMG6-209ENST00000571442 PCDHB5Q9Y5E4 795 aa7.45□□□□□ -1.22
SMG6-209ENST00000571442 COL4A3Q01955 1670 aa7.44□□□□□ -1.22
SMG6-209ENST00000571442 STX10O60499 249 aa7.44□□□□□ -1.22
SMG6-209ENST00000571442 ASGR2P07307 311 aa7.44□□□□□ -1.22
SMG6-209ENST00000571442 ZNF18P17022 549 aa7.44□□□□□ -1.22
SMG6-209ENST00000571442 FSHRP23945 695 aa7.44□□□□□ -1.22
SMG6-209ENST00000571442 PON1P27169 355 aa7.44□□□□□ -1.22
SMG6-209ENST00000571442 MTIF2P46199 727 aaKnown RBP7.44□□□□□ -1.22
SMG6-209ENST00000571442 KLK7P49862 253 aa7.44□□□□□ -1.22
SMG6-209ENST00000571442 EPHA5P54756 1037 aa7.44□□□□□ -1.22
SMG6-209ENST00000571442 CYP27A1Q02318 531 aa7.44□□□□□ -1.22
SMG6-209ENST00000571442 PLD1Q13393 1074 aa7.44□□□□□ -1.22
SMG6-209ENST00000571442 CUL2Q13617 745 aa7.44□□□□□ -1.22
SMG6-209ENST00000571442 IQCB1Q15051 598 aa7.44□□□□□ -1.22
SMG6-209ENST00000571442 KRT31Q15323 416 aa7.44□□□□□ -1.22
SMG6-209ENST00000571442 MAN2A1Q16706 1144 aa7.44□□□□□ -1.22
SMG6-209ENST00000571442 TPD52L1Q16890 204 aaPredicted RBP7.44□□□□□ -1.22
SMG6-209ENST00000571442 ZSCAN23Q3MJ62 389 aa7.44□□□□□ -1.22
SMG6-209ENST00000571442 CFAP221Q4G0U5 840 aa7.44□□□□□ -1.22
SMG6-209ENST00000571442 PABPC1LQ4VXU2 614 aaKnown RBP7.44□□□□□ -1.22
SMG6-209ENST00000571442 VWA3BQ502W6 1294 aa7.44□□□□□ -1.22
SMG6-209ENST00000571442 CT47A1Q5JQC4 288 aaPredicted RBP7.44□□□□□ -1.22
SMG6-209ENST00000571442 GAREM2Q75VX8 874 aa7.44□□□□□ -1.22
SMG6-209ENST00000571442 DNAJB7Q7Z6W7 309 aaPredicted RBP7.44□□□□□ -1.22
SMG6-209ENST00000571442 FAM35AQ86V20 835 aa7.44□□□□□ -1.22
SMG6-209ENST00000571442 SPATA2LQ8IUW3 424 aaPredicted RBP7.44□□□□□ -1.22
SMG6-209ENST00000571442 NPAS3Q8IXF0 933 aa7.44□□□□□ -1.22
SMG6-209ENST00000571442 GJD3Q8N144 294 aa7.44□□□□□ -1.22
SMG6-209ENST00000571442 CRYBG2Q8N1P7 616 aa7.44□□□□□ -1.22
SMG6-209ENST00000571442 SLC4A11Q8NBS3 891 aa7.44□□□□□ -1.22
SMG6-209ENST00000571442 SHKBP1Q8TBC3 707 aa7.44□□□□□ -1.22
SMG6-209ENST00000571442 RSAD2Q8WXG1 361 aa7.44□□□□□ -1.22
SMG6-209ENST00000571442 FGF13Q92913 245 aa7.44□□□□□ -1.22
SMG6-209ENST00000571442 NECTIN4Q96NY8 510 aa7.44□□□□□ -1.22
SMG6-209ENST00000571442 KCNK16Q96T55 309 aa7.44□□□□□ -1.22
SMG6-209ENST00000571442 SMOQ99835 787 aa7.44□□□□□ -1.22
SMG6-209ENST00000571442 TUBGCP2Q9BSJ2 902 aa7.44□□□□□ -1.22
SMG6-209ENST00000571442 LRFN3Q9BTN0 628 aa7.44□□□□□ -1.22
SMG6-209ENST00000571442 CYP3A43Q9HB55 503 aa7.44□□□□□ -1.22
SMG6-209ENST00000571442 ACP6Q9NPH0 428 aa7.44□□□□□ -1.22
SMG6-209ENST00000571442 FAM49BQ9NUQ9 324 aa7.44□□□□□ -1.22
SMG6-209ENST00000571442 GCNT4Q9P109 453 aa7.44□□□□□ -1.22
SMG6-209ENST00000571442 DPP7Q9UHL4 492 aa7.44□□□□□ -1.22
SMG6-209ENST00000571442 DACH1Q9UI36 760 aa7.44□□□□□ -1.22
SMG6-209ENST00000571442 MYO16Q9Y6X6 1858 aa7.43□□□□□ -1.22
SMG6-209ENST00000571442 A0A1W2PRU2 124 aa7.43□□□□□ -1.22
SMG6-209ENST00000571442 SLC38A8A6NNN8 435 aa7.43□□□□□ -1.22
SMG6-209ENST00000571442 BECN2A8MW95 431 aa7.43□□□□□ -1.22
SMG6-209ENST00000571442 HHLA1C9JL84 531 aa7.43□□□□□ -1.22
SMG6-209ENST00000571442 F8VP50 259 aa7.43□□□□□ -1.22
SMG6-209ENST00000571442 TULP2O00295 520 aa7.43□□□□□ -1.22
SMG6-209ENST00000571442 EPHB6O15197 1021 aa7.43□□□□□ -1.22
SMG6-209ENST00000571442 P4HA2O15460 535 aa7.43□□□□□ -1.22
SMG6-209ENST00000571442 XYLBO75191 536 aa7.43□□□□□ -1.22
SMG6-209ENST00000571442 NOL4O94818 638 aa7.43□□□□□ -1.22
SMG6-209ENST00000571442 FGFR1OPO95684 399 aaKnown RBP7.43□□□□□ -1.22
SMG6-209ENST00000571442 PNMA6AP0CW24 399 aaPredicted RBP7.43□□□□□ -1.22
SMG6-209ENST00000571442 MYL4P12829 197 aa7.43□□□□□ -1.22
SMG6-209ENST00000571442 PRKCSHP14314 528 aaPredicted RBP7.43□□□□□ -1.22
Retrieved 100 of 20,778 RNA–protein pairs in 16.9 ms