RNA–Protein interactions for RNA: ENST00000571263.2

CDRT1-206, CMT1A duplicated region transcript 1, humanhuman

TSL 1 (best)

Gene CDRT1, Length 800 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDRT1-206ENST00000571263 MED10Q9BTT4 135 aa12.63□□□□□ -0.39
CDRT1-206ENST00000571263 DUSP16Q9BY84 665 aa12.63□□□□□ -0.39
CDRT1-206ENST00000571263 ZCWPW1Q9H0M4 648 aa12.63□□□□□ -0.39
CDRT1-206ENST00000571263 MRPL47Q9HD33 250 aaKnown RBP12.63□□□□□ -0.39
CDRT1-206ENST00000571263 EIF2AK3Q9NZJ5 1116 aaKnown RBP12.63□□□□□ -0.39
CDRT1-206ENST00000571263 C5orf67F2Z3F1 127 aa12.62□□□□□ -0.39
CDRT1-206ENST00000571263 M0QYV0 167 aa12.62□□□□□ -0.39
CDRT1-206ENST00000571263 ZNF500O60304 480 aaPredicted RBP12.62□□□□□ -0.39
CDRT1-206ENST00000571263 URODP06132 367 aa12.62□□□□□ -0.39
CDRT1-206ENST00000571263 FAM200BP0CF97 657 aa12.62□□□□□ -0.39
CDRT1-206ENST00000571263 MMP8P22894 467 aa12.62□□□□□ -0.39
CDRT1-206ENST00000571263 ACAT1P24752 427 aaKnown RBP12.62□□□□□ -0.39
CDRT1-206ENST00000571263 GLUD2P49448 558 aa12.62□□□□□ -0.39
CDRT1-206ENST00000571263 GALCP54803 685 aa12.62□□□□□ -0.39
CDRT1-206ENST00000571263 DSG1Q02413 1049 aa12.62□□□□□ -0.39
CDRT1-206ENST00000571263 TAP1Q03518 808 aa12.62□□□□□ -0.39
CDRT1-206ENST00000571263 GPR17Q13304 367 aa12.62□□□□□ -0.39
CDRT1-206ENST00000571263 SHHQ15465 462 aa12.62□□□□□ -0.39
CDRT1-206ENST00000571263 RAB30Q15771 203 aa12.62□□□□□ -0.39
CDRT1-206ENST00000571263 GOLGA7BQ2TAP0 167 aa12.62□□□□□ -0.39
CDRT1-206ENST00000571263 CFAP221Q4G0U5 840 aa12.62□□□□□ -0.39
CDRT1-206ENST00000571263 PKDCCQ504Y2 493 aa12.62□□□□□ -0.39
CDRT1-206ENST00000571263 MDH1BQ5I0G3 518 aa12.62□□□□□ -0.39
CDRT1-206ENST00000571263 NAA35Q5VZE5 725 aa12.62□□□□□ -0.39
CDRT1-206ENST00000571263 VSTM1Q6UX27 236 aa12.62□□□□□ -0.39
CDRT1-206ENST00000571263 TMCO2Q7Z6W1 182 aaPredicted RBP12.62□□□□□ -0.39
CDRT1-206ENST00000571263 SPATA2LQ8IUW3 424 aaPredicted RBP12.62□□□□□ -0.39
CDRT1-206ENST00000571263 REXO1L1PQ8IX06 675 aa12.62□□□□□ -0.39
CDRT1-206ENST00000571263 MCOLN2Q8IZK6 566 aa12.62□□□□□ -0.39
CDRT1-206ENST00000571263 FUKQ8N0W3 1084 aa12.62□□□□□ -0.39
CDRT1-206ENST00000571263 OLIG1Q8TAK6 271 aa12.62□□□□□ -0.39
CDRT1-206ENST00000571263 SPPL2BQ8TCT7 592 aa12.62□□□□□ -0.39
CDRT1-206ENST00000571263 SLC2A14Q8TDB8 520 aa12.62□□□□□ -0.39
CDRT1-206ENST00000571263 IPO4Q8TEX9 1081 aaKnown RBP12.62□□□□□ -0.39
CDRT1-206ENST00000571263 SLC35F5Q8WV83 523 aa12.62□□□□□ -0.39
CDRT1-206ENST00000571263 SMARCD1Q96GM5 515 aa12.62□□□□□ -0.39
CDRT1-206ENST00000571263 CEP295NLQ96MC4 621 aa12.62□□□□□ -0.39
CDRT1-206ENST00000571263 RTP3Q9BQQ7 232 aa12.62□□□□□ -0.39
CDRT1-206ENST00000571263 ZSWIM1Q9BR11 485 aa12.62□□□□□ -0.39
CDRT1-206ENST00000571263 DPEP3Q9H4B8 488 aa12.62□□□□□ -0.39
CDRT1-206ENST00000571263 ABCB6Q9NP58 842 aa12.62□□□□□ -0.39
CDRT1-206ENST00000571263 PNPLA8Q9NP80 782 aa12.62□□□□□ -0.39
CDRT1-206ENST00000571263 AVENQ9NQS1 362 aaPredicted RBP12.62□□□□□ -0.39
CDRT1-206ENST00000571263 ADAM22Q9P0K1 906 aa12.62□□□□□ -0.39
CDRT1-206ENST00000571263 HSFX1Q9UBD0 423 aa12.62□□□□□ -0.39
CDRT1-206ENST00000571263 MTRRQ9UBK8 725 aa12.62□□□□□ -0.39
CDRT1-206ENST00000571263 GTF3C4Q9UKN8 822 aa12.62□□□□□ -0.39
CDRT1-206ENST00000571263 REXO2Q9Y3B8 237 aaKnown RBP12.62□□□□□ -0.39
CDRT1-206ENST00000571263 NME7Q9Y5B8 376 aa12.62□□□□□ -0.39
CDRT1-206ENST00000571263 SCINQ9Y6U3 715 aa12.62□□□□□ -0.39
CDRT1-206ENST00000571263 MYBPHLA2RUH7 354 aa12.61□□□□□ -0.39
CDRT1-206ENST00000571263 TMCO5BA8MYB1 307 aa12.61□□□□□ -0.39
CDRT1-206ENST00000571263 F8W810 466 aa12.61□□□□□ -0.39
CDRT1-206ENST00000571263 XPO1O14980 1071 aaKnown RBP12.61□□□□□ -0.39
CDRT1-206ENST00000571263 KIF5CO60282 957 aa12.61□□□□□ -0.39
CDRT1-206ENST00000571263 TBC1D4O60343 1298 aa12.61□□□□□ -0.39
CDRT1-206ENST00000571263 FGF18O76093 207 aa12.61□□□□□ -0.39
CDRT1-206ENST00000571263 C1RP00736 705 aa12.61□□□□□ -0.39
CDRT1-206ENST00000571263 NPR3P17342 541 aa12.61□□□□□ -0.39
CDRT1-206ENST00000571263 PLA2G4AP47712 749 aa12.61□□□□□ -0.39
CDRT1-206ENST00000571263 GABRB2P47870 512 aa12.61□□□□□ -0.39
CDRT1-206ENST00000571263 HADHBP55084 474 aaKnown RBP12.61□□□□□ -0.39
CDRT1-206ENST00000571263 GSCP56915 257 aaPredicted RBP12.61□□□□□ -0.39
CDRT1-206ENST00000571263 PSMC1P62191 440 aaKnown RBP12.61□□□□□ -0.39
CDRT1-206ENST00000571263 ORC1Q13415 861 aa12.61□□□□□ -0.39
CDRT1-206ENST00000571263 ZNF268Q14587 947 aaPredicted RBP12.61□□□□□ -0.39
CDRT1-206ENST00000571263 PSMD5Q16401 504 aa12.61□□□□□ -0.39
CDRT1-206ENST00000571263 KIAA0319Q5VV43 1072 aa12.61□□□□□ -0.39
CDRT1-206ENST00000571263 TPGS2Q68CL5 300 aa12.61□□□□□ -0.39
CDRT1-206ENST00000571263 SLC8B1Q6J4K2 584 aa12.61□□□□□ -0.39
CDRT1-206ENST00000571263 PDE12Q6L8Q7 609 aaKnown RBP12.61□□□□□ -0.39
CDRT1-206ENST00000571263 DENND1BQ6P3S1 775 aa12.61□□□□□ -0.39
CDRT1-206ENST00000571263 TMEM110Q86TL2 294 aa12.61□□□□□ -0.39
CDRT1-206ENST00000571263 GPIHBP1Q8IV16 184 aa12.61□□□□□ -0.39
CDRT1-206ENST00000571263 C1orf131Q8NDD1 294 aaKnown RBP12.61□□□□□ -0.39
CDRT1-206ENST00000571263 CPA5Q8WXQ8 436 aa12.61□□□□□ -0.39
CDRT1-206ENST00000571263 RIN2Q8WYP3 895 aaPredicted RBP12.61□□□□□ -0.39
CDRT1-206ENST00000571263 KCTD13Q8WZ19 329 aa12.61□□□□□ -0.39
CDRT1-206ENST00000571263 C18orf8Q96DM3 657 aa12.61□□□□□ -0.39
CDRT1-206ENST00000571263 PCED1BQ96HM7 432 aa12.61□□□□□ -0.39
CDRT1-206ENST00000571263 PPP1R13BQ96KQ4 1090 aa12.61□□□□□ -0.39
CDRT1-206ENST00000571263 PKMYT1Q99640 499 aa12.61□□□□□ -0.39
CDRT1-206ENST00000571263 C11orf84Q9BUA3 381 aaPredicted RBP12.61□□□□□ -0.39
CDRT1-206ENST00000571263 B3GNT5Q9BYG0 378 aa12.61□□□□□ -0.39
CDRT1-206ENST00000571263 SYNCQ9H7C4 482 aa12.61□□□□□ -0.39
CDRT1-206ENST00000571263 CRTAC1Q9NQ79 661 aa12.61□□□□□ -0.39
CDRT1-206ENST00000571263 MRPL17Q9NRX2 175 aaKnown RBP12.61□□□□□ -0.39
CDRT1-206ENST00000571263 FAM49BQ9NUQ9 324 aa12.61□□□□□ -0.39
CDRT1-206ENST00000571263 PARVAQ9NVD7 372 aa12.61□□□□□ -0.39
CDRT1-206ENST00000571263 TRMT1Q9NXH9 659 aaKnown RBP12.61□□□□□ -0.39
CDRT1-206ENST00000571263 FNIP2Q9P278 1114 aa12.61□□□□□ -0.39
CDRT1-206ENST00000571263 UVRAGQ9P2Y5 699 aa12.61□□□□□ -0.39
CDRT1-206ENST00000571263 HCSTQ9UBK5 93 aa12.61□□□□□ -0.39
CDRT1-206ENST00000571263 MSRAQ9UJ68 235 aa12.61□□□□□ -0.39
CDRT1-206ENST00000571263 PCDHB5Q9Y5E4 795 aa12.61□□□□□ -0.39
CDRT1-206ENST00000571263 LINC01553A4QN01 128 aa12.6□□□□□ -0.39
CDRT1-206ENST00000571263 LPXNO60711 386 aa12.6□□□□□ -0.39
CDRT1-206ENST00000571263 ATP2C2O75185 946 aa12.6□□□□□ -0.39
CDRT1-206ENST00000571263 ADORA2BP29275 332 aa12.6□□□□□ -0.39
CDRT1-206ENST00000571263 SCNN1AP37088 669 aa12.6□□□□□ -0.39
Retrieved 100 of 20,778 RNA–protein pairs in 35.9 ms