RNA–Protein interactions for RNA: ENST00000571064.5

UBFD1-210, Transcript of ubiquitin family domain containing 1, humanhuman

TSL 3

Gene UBFD1, Length 794 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBFD1-210ENST00000571064 SHISA7A6NL88 538 aa23.06■■□□□ 1.28
UBFD1-210ENST00000571064 AARSP49588 968 aaKnown RBP eCLIP23.06■■□□□ 1.28
UBFD1-210ENST00000571064 ZNF445P59923 1031 aa23.06■■□□□ 1.28
UBFD1-210ENST00000571064 ZNF852Q6ZMS4 543 aa23.06■■□□□ 1.28
UBFD1-210ENST00000571064 CBX8Q9HC52 389 aa23.06■■□□□ 1.28
UBFD1-210ENST00000571064 VWA8A3KMH1 1905 aa23.06■■□□□ 1.28
UBFD1-210ENST00000571064 KRT19P08727 400 aa23.05■■□□□ 1.28
UBFD1-210ENST00000571064 GTF2H1P32780 548 aa23.05■■□□□ 1.28
UBFD1-210ENST00000571064 LILRA4P59901 499 aa23.05■■□□□ 1.28
UBFD1-210ENST00000571064 RBP5P82980 135 aa23.05■■□□□ 1.28
UBFD1-210ENST00000571064 ADCY1Q08828 1119 aa23.05■■□□□ 1.28
UBFD1-210ENST00000571064 CBWD6Q4V339 395 aa23.05■■□□□ 1.28
UBFD1-210ENST00000571064 PABPC1LQ4VXU2 614 aaKnown RBP23.05■■□□□ 1.28
UBFD1-210ENST00000571064 PPM1JQ5JR12 505 aa23.05■■□□□ 1.28
UBFD1-210ENST00000571064 CBWD3Q5JTY5 395 aa23.05■■□□□ 1.28
UBFD1-210ENST00000571064 CBWD5Q5RIA9 395 aa23.05■■□□□ 1.28
UBFD1-210ENST00000571064 TCERG1LQ5VWI1 586 aa23.05■■□□□ 1.28
UBFD1-210ENST00000571064 USP37Q86T82 979 aa23.05■■□□□ 1.28
UBFD1-210ENST00000571064 MCRS1Q96EZ8 462 aa23.05■■□□□ 1.28
UBFD1-210ENST00000571064 TMEM8AQ9HCN3 771 aa23.05■■□□□ 1.28
UBFD1-210ENST00000571064 BIRC3Q13489 604 aa23.04■■□□□ 1.28
UBFD1-210ENST00000571064 POTEHQ6S545 545 aa23.04■■□□□ 1.28
UBFD1-210ENST00000571064 CREBRFQ8IUR6 639 aa23.04■■□□□ 1.28
UBFD1-210ENST00000571064 ELMO3Q96BJ8 720 aa23.04■■□□□ 1.28
UBFD1-210ENST00000571064 FAM126AQ9BYI3 521 aaPredicted RBP23.04■■□□□ 1.28
UBFD1-210ENST00000571064 XYLT2Q9H1B5 865 aa23.04■■□□□ 1.28
UBFD1-210ENST00000571064 MRPS17Q9Y2R5 130 aaKnown RBP23.04■■□□□ 1.28
UBFD1-210ENST00000571064 CFAP47Q6ZTR5 3102 aa23.04■■□□□ 1.28
UBFD1-210ENST00000571064 KCNJ18B7U540 433 aa23.03■■□□□ 1.28
UBFD1-210ENST00000571064 ECI2O75521 394 aa23.03■■□□□ 1.28
UBFD1-210ENST00000571064 TDGF1P13385 188 aa23.03■■□□□ 1.28
UBFD1-210ENST00000571064 ZNF18P17022 549 aa23.03■■□□□ 1.28
UBFD1-210ENST00000571064 MYL6P60660 151 aa23.03■■□□□ 1.28
UBFD1-210ENST00000571064 KCNJ12Q14500 433 aa23.03■■□□□ 1.28
UBFD1-210ENST00000571064 TCP11X2Q5H9J9 407 aa23.03■■□□□ 1.28
UBFD1-210ENST00000571064 FAM114A1Q8IWE2 563 aa23.03■■□□□ 1.28
UBFD1-210ENST00000571064 LRRC52Q8N7C0 313 aa23.03■■□□□ 1.28
UBFD1-210ENST00000571064 TAS1R2Q8TE23 839 aa23.03■■□□□ 1.28
UBFD1-210ENST00000571064 SEMA4DQ92854 862 aa23.03■■□□□ 1.28
UBFD1-210ENST00000571064 SUSD3Q96L08 255 aa23.03■■□□□ 1.28
UBFD1-210ENST00000571064 TSPY26PQ9H489 355 aa23.03■■□□□ 1.28
UBFD1-210ENST00000571064 RAB23Q9ULC3 237 aa23.03■■□□□ 1.28
UBFD1-210ENST00000571064 NDRG2Q9UN36 371 aaKnown RBP23.03■■□□□ 1.28
UBFD1-210ENST00000571064 MRPS23Q9Y3D9 190 aaKnown RBP23.03■■□□□ 1.28
UBFD1-210ENST00000571064 NUB1Q9Y5A7 615 aa23.03■■□□□ 1.28
UBFD1-210ENST00000571064 LOC105378220A0A1B0GUY1 285 aaPredicted RBP23.02■■□□□ 1.28
UBFD1-210ENST00000571064 SLC30A4O14863 429 aa23.02■■□□□ 1.28
UBFD1-210ENST00000571064 PHACTR2O75167 634 aa23.02■■□□□ 1.28
UBFD1-210ENST00000571064 HLA-DRAP01903 254 aa23.02■■□□□ 1.28
UBFD1-210ENST00000571064 POU2F2P09086 479 aa23.02■■□□□ 1.28
UBFD1-210ENST00000571064 OR1D2P34982 312 aa23.02■■□□□ 1.28
UBFD1-210ENST00000571064 FMO5P49326 533 aa23.02■■□□□ 1.28
UBFD1-210ENST00000571064 TAF6P49848 677 aa23.02■■□□□ 1.28
UBFD1-210ENST00000571064 MXI1P50539 228 aa23.02■■□□□ 1.28
UBFD1-210ENST00000571064 KCNH2Q12809 1159 aa23.02■■□□□ 1.28
UBFD1-210ENST00000571064 NCOA4Q13772 614 aa23.02■■□□□ 1.28
UBFD1-210ENST00000571064 SLC5A9Q2M3M2 681 aa23.02■■□□□ 1.28
UBFD1-210ENST00000571064 KRT39Q6A163 491 aa23.02■■□□□ 1.28
UBFD1-210ENST00000571064 TANGO2Q6ICL3 276 aa23.02■■□□□ 1.28
UBFD1-210ENST00000571064 LUZP1Q86V48 1076 aa23.02■■□□□ 1.28
UBFD1-210ENST00000571064 ZNF687Q8N1G0 1237 aa23.02■■□□□ 1.28
UBFD1-210ENST00000571064 NETO1Q8TDF5 533 aa23.02■■□□□ 1.28
UBFD1-210ENST00000571064 HPDLQ96IR7 371 aa23.02■■□□□ 1.28
UBFD1-210ENST00000571064 UTP18Q9Y5J1 556 aaKnown RBP eCLIP23.02■■□□□ 1.28
UBFD1-210ENST00000571064 CACNA1GO43497 2377 aa23.02■■□□□ 1.28
UBFD1-210ENST00000571064 CHD8Q9HCK8 2581 aa23.02■■□□□ 1.28
UBFD1-210ENST00000571064 M0QZQ0 153 aa23.01■■□□□ 1.27
UBFD1-210ENST00000571064 STX10O60499 249 aa23.01■■□□□ 1.27
UBFD1-210ENST00000571064 FGFR3P22607 806 aa23.01■■□□□ 1.27
UBFD1-210ENST00000571064 EEF1GP26641 437 aaKnown RBP23.01■■□□□ 1.27
UBFD1-210ENST00000571064 TKTP29401 623 aaKnown RBP23.01■■□□□ 1.27
UBFD1-210ENST00000571064 MTIF2P46199 727 aaKnown RBP23.01■■□□□ 1.27
UBFD1-210ENST00000571064 RAB33AQ14088 237 aa23.01■■□□□ 1.27
UBFD1-210ENST00000571064 UVSSAQ2YD98 709 aa23.01■■□□□ 1.27
UBFD1-210ENST00000571064 MIIPQ5JXC2 388 aa23.01■■□□□ 1.27
UBFD1-210ENST00000571064 SENP8Q96LD8 212 aa23.01■■□□□ 1.27
UBFD1-210ENST00000571064 ZNF560Q96MR9 790 aa23.01■■□□□ 1.27
UBFD1-210ENST00000571064 MAGEC2Q9UBF1 373 aaPredicted RBP23.01■■□□□ 1.27
UBFD1-210ENST00000571064 COQ4Q9Y3A0 265 aa23.01■■□□□ 1.27
UBFD1-210ENST00000571064 SMTNL1A8MU46 457 aa23■■□□□ 1.27
UBFD1-210ENST00000571064 KPNA7A9QM74 516 aa23■■□□□ 1.27
UBFD1-210ENST00000571064 AFPP02771 609 aaKnown RBP23■■□□□ 1.27
UBFD1-210ENST00000571064 RHOP08100 348 aa23■■□□□ 1.27
UBFD1-210ENST00000571064 PNPLA4P41247 253 aa23■■□□□ 1.27
UBFD1-210ENST00000571064 TRPC3Q13507 836 aa23■■□□□ 1.27
UBFD1-210ENST00000571064 SV2CQ496J9 727 aa23■■□□□ 1.27
UBFD1-210ENST00000571064 LAIR1Q6GTX8 287 aa23■■□□□ 1.27
UBFD1-210ENST00000571064 PRR23BQ6ZRT6 265 aa23■■□□□ 1.27
UBFD1-210ENST00000571064 APTXQ7Z2E3 356 aaKnown RBP23■■□□□ 1.27
UBFD1-210ENST00000571064 FAM200AQ8TCP9 573 aa23■■□□□ 1.27
UBFD1-210ENST00000571064 TUBGCP2Q9BSJ2 902 aa23■■□□□ 1.27
UBFD1-210ENST00000571064 PI4K2AQ9BTU6 479 aa23■■□□□ 1.27
UBFD1-210ENST00000571064 CHRDQ9H2X0 955 aa23■■□□□ 1.27
UBFD1-210ENST00000571064 PCDHB8Q9UN66 801 aa23■■□□□ 1.27
UBFD1-210ENST00000571064 TSC2P49815 1807 aa23■■□□□ 1.27
UBFD1-210ENST00000571064 PMM2O15305 246 aa22.99■■□□□ 1.27
UBFD1-210ENST00000571064 STAU1O95793 577 aaKnown RBP22.99■■□□□ 1.27
UBFD1-210ENST00000571064 CAVIN2O95810 425 aa22.99■■□□□ 1.27
UBFD1-210ENST00000571064 ATP1A3P13637 1013 aa22.99■■□□□ 1.27
UBFD1-210ENST00000571064 CEBPBP17676 345 aa22.99■■□□□ 1.27
Retrieved 100 of 20,778 RNA–protein pairs in 34.7 ms