RNA–Protein interactions for RNA: ENST00000571043.5

RPAIN-208, Transcript of RPA interacting protein, humanhuman

TSL 2

Gene RPAIN, Length 1,547 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPAIN-208ENST00000571043 AMACRQ9UHK6 382 aa18.32■□□□□ 0.52
RPAIN-208ENST00000571043 HPCAL4Q9UM19 191 aa18.32■□□□□ 0.52
RPAIN-208ENST00000571043 UBQLN1Q9UMX0 589 aaKnown RBP18.32■□□□□ 0.52
RPAIN-208ENST00000571043 NR2E1Q9Y466 385 aa18.32■□□□□ 0.52
RPAIN-208ENST00000571043 ANK1P16157 1881 aa18.31■□□□□ 0.52
RPAIN-208ENST00000571043 ENPP3O14638 875 aa18.31■□□□□ 0.52
RPAIN-208ENST00000571043 PHF2O75151 1096 aa18.31■□□□□ 0.52
RPAIN-208ENST00000571043 RECQL4O94761 1208 aa18.31■□□□□ 0.52
RPAIN-208ENST00000571043 PFKMP08237 780 aa18.31■□□□□ 0.52
RPAIN-208ENST00000571043 AARSP49588 968 aaKnown RBP eCLIP18.31■□□□□ 0.52
RPAIN-208ENST00000571043 FAM189BP81408 668 aa18.31■□□□□ 0.52
RPAIN-208ENST00000571043 CYP1B1Q16678 543 aa18.31■□□□□ 0.52
RPAIN-208ENST00000571043 PPP1R15BQ5SWA1 713 aa18.31■□□□□ 0.52
RPAIN-208ENST00000571043 AADACL2Q6P093 401 aa18.31■□□□□ 0.52
RPAIN-208ENST00000571043 CNKSR3Q6P9H4 555 aa18.31■□□□□ 0.52
RPAIN-208ENST00000571043 MRPL10Q7Z7H8 261 aaKnown RBP18.31■□□□□ 0.52
RPAIN-208ENST00000571043 RHOT1Q8IXI2 618 aa18.31■□□□□ 0.52
RPAIN-208ENST00000571043 TMEM130Q8N3G9 435 aa18.31■□□□□ 0.52
RPAIN-208ENST00000571043 SMG8Q8ND04 991 aaKnown RBP18.31■□□□□ 0.52
RPAIN-208ENST00000571043 C3orf20Q8ND61 904 aa18.31■□□□□ 0.52
RPAIN-208ENST00000571043 MAIP1Q8WWC4 291 aa18.31■□□□□ 0.52
RPAIN-208ENST00000571043 IFT81Q8WYA0 676 aa18.31■□□□□ 0.52
RPAIN-208ENST00000571043 SEC14L1Q92503 715 aa18.31■□□□□ 0.52
RPAIN-208ENST00000571043 DDX27Q96GQ7 796 aaKnown RBP18.31■□□□□ 0.52
RPAIN-208ENST00000571043 TWNKQ96RR1 684 aa18.31■□□□□ 0.52
RPAIN-208ENST00000571043 NXF3Q9H4D5 531 aaKnown RBP18.31■□□□□ 0.52
RPAIN-208ENST00000571043 WDR35Q9P2L0 1181 aa18.31■□□□□ 0.52
RPAIN-208ENST00000571043 ZSCAN5CA6NGD5 496 aaPredicted RBP18.3■□□□□ 0.52
RPAIN-208ENST00000571043 C9IYK1 514 aa18.3■□□□□ 0.52
RPAIN-208ENST00000571043 FSCN2O14926 492 aa18.3■□□□□ 0.52
RPAIN-208ENST00000571043 XPOTO43592 962 aaKnown RBP18.3■□□□□ 0.52
RPAIN-208ENST00000571043 SKIP12755 728 aa18.3■□□□□ 0.52
RPAIN-208ENST00000571043 KCNE1P15382 129 aa18.3■□□□□ 0.52
RPAIN-208ENST00000571043 ATF7P17544 494 aaPredicted RBP18.3■□□□□ 0.52
RPAIN-208ENST00000571043 STILQ15468 1287 aa18.3■□□□□ 0.52
RPAIN-208ENST00000571043 SLC24A5Q71RS6 500 aa18.3■□□□□ 0.52
RPAIN-208ENST00000571043 PRELID2Q8N945 189 aa18.3■□□□□ 0.52
RPAIN-208ENST00000571043 LINC01599Q8WXQ3 324 aa18.3■□□□□ 0.52
RPAIN-208ENST00000571043 BADQ92934 168 aa18.3■□□□□ 0.52
RPAIN-208ENST00000571043 RAB17Q9H0T7 212 aa18.3■□□□□ 0.52
RPAIN-208ENST00000571043 IL23AQ9NPF7 189 aa18.3■□□□□ 0.52
RPAIN-208ENST00000571043 NFU1Q9UMS0 254 aa18.3■□□□□ 0.52
RPAIN-208ENST00000571043 WDR3Q9UNX4 943 aaKnown RBP eCLIP18.3■□□□□ 0.52
RPAIN-208ENST00000571043 IPPQ9Y573 584 aa18.3■□□□□ 0.52
RPAIN-208ENST00000571043 LTBP2Q14767 1821 aa18.3■□□□□ 0.52
RPAIN-208ENST00000571043 ESYT3A0FGR9 886 aa18.29■□□□□ 0.52
RPAIN-208ENST00000571043 O00370 1275 aa18.29■□□□□ 0.52
RPAIN-208ENST00000571043 RAB27AP51159 221 aa18.29■□□□□ 0.52
RPAIN-208ENST00000571043 NDST1P52848 882 aa18.29■□□□□ 0.52
RPAIN-208ENST00000571043 DR1Q01658 176 aa18.29■□□□□ 0.52
RPAIN-208ENST00000571043 IKBKEQ14164 716 aa18.29■□□□□ 0.52
RPAIN-208ENST00000571043 SGO2Q562F6 1265 aa18.29■□□□□ 0.52
RPAIN-208ENST00000571043 LRRC38Q5VT99 294 aa18.29■□□□□ 0.52
RPAIN-208ENST00000571043 C12orf50Q8NA57 414 aaPredicted RBP18.29■□□□□ 0.52
RPAIN-208ENST00000571043 HEXIM2Q96MH2 286 aaKnown RBP18.29■□□□□ 0.52
RPAIN-208ENST00000571043 NT5C1AQ9BXI3 368 aa18.29■□□□□ 0.52
RPAIN-208ENST00000571043 MED4Q9NPJ6 270 aa18.29■□□□□ 0.52
RPAIN-208ENST00000571043 FAM114A2Q9NRY5 505 aa18.29■□□□□ 0.52
RPAIN-208ENST00000571043 HMGXB4Q9UGU5 601 aa18.29■□□□□ 0.52
RPAIN-208ENST00000571043 PCYOX1Q9UHG3 505 aa18.29■□□□□ 0.52
RPAIN-208ENST00000571043 UTP11Q9Y3A2 253 aaKnown RBP18.29■□□□□ 0.52
RPAIN-208ENST00000571043 HES2Q9Y543 173 aa18.29■□□□□ 0.52
RPAIN-208ENST00000571043 TTI1O43156 1089 aa18.28■□□□□ 0.52
RPAIN-208ENST00000571043 MICAL2O94851 1124 aa18.28■□□□□ 0.52
RPAIN-208ENST00000571043 SYN1P17600 705 aa18.28■□□□□ 0.52
RPAIN-208ENST00000571043 CYP3A5P20815 502 aa18.28■□□□□ 0.52
RPAIN-208ENST00000571043 OAS2P29728 719 aaKnown RBP18.28■□□□□ 0.52
RPAIN-208ENST00000571043 FPGSQ05932 587 aa18.28■□□□□ 0.52
RPAIN-208ENST00000571043 PPIGQ13427 754 aaKnown RBP eCLIP18.28■□□□□ 0.522e-8■■■□□ 15.8
RPAIN-208ENST00000571043 PIGHQ14442 188 aaPredicted RBP18.28■□□□□ 0.52
RPAIN-208ENST00000571043 ZNF268Q14587 947 aaPredicted RBP18.28■□□□□ 0.52
RPAIN-208ENST00000571043 PTPN20Q4JDL3 420 aa18.28■□□□□ 0.52
RPAIN-208ENST00000571043 C9orf57Q5W0N0 161 aa18.28■□□□□ 0.52
RPAIN-208ENST00000571043 DCUN1D2Q6PH85 259 aa18.28■□□□□ 0.52
RPAIN-208ENST00000571043 C16orf59Q7L2K0 433 aa18.28■□□□□ 0.52
RPAIN-208ENST00000571043 ADAT2Q7Z6V5 191 aaKnown RBP18.28■□□□□ 0.52
RPAIN-208ENST00000571043 KATNAL2Q8IYT4 538 aa18.28■□□□□ 0.52
RPAIN-208ENST00000571043 MREGQ8N565 214 aa18.28■□□□□ 0.52
RPAIN-208ENST00000571043 NIPA2Q8N8Q9 360 aa18.28■□□□□ 0.52
RPAIN-208ENST00000571043 CXCL16Q9H2A7 254 aa18.28■□□□□ 0.52
RPAIN-208ENST00000571043 PCDH10Q9P2E7 1040 aa18.28■□□□□ 0.52
RPAIN-208ENST00000571043 TUBGCP4Q9UGJ1 667 aa18.28■□□□□ 0.52
RPAIN-208ENST00000571043 RASAL2Q9UJF2 1139 aa18.28■□□□□ 0.52
RPAIN-208ENST00000571043 NR2E3Q9Y5X4 410 aa18.28■□□□□ 0.52
RPAIN-208ENST00000571043 SMIM28A0A1B0GU29 152 aa18.28■□□□□ 0.52
RPAIN-208ENST00000571043 ABHD14A-ACY1A0A1B0GW23 586 aa18.28■□□□□ 0.52
RPAIN-208ENST00000571043 LOC101059915A0A1B0GWI6 518 aaPredicted RBP18.28■□□□□ 0.52
RPAIN-208ENST00000571043 SIGLEC16A6NMB1 481 aa18.28■□□□□ 0.52
RPAIN-208ENST00000571043 EOMESO95936 686 aa18.28■□□□□ 0.52
RPAIN-208ENST00000571043 AKAP5P24588 427 aa18.28■□□□□ 0.52
RPAIN-208ENST00000571043 PNPLA4P41247 253 aa18.28■□□□□ 0.52
RPAIN-208ENST00000571043 GABRB2P47870 512 aa18.28■□□□□ 0.52
RPAIN-208ENST00000571043 FNTAP49354 379 aa18.28■□□□□ 0.52
RPAIN-208ENST00000571043 DRG2P55039 364 aaKnown RBP18.28■□□□□ 0.52
RPAIN-208ENST00000571043 RPL7AP62424 266 aaKnown RBP18.28■□□□□ 0.52
RPAIN-208ENST00000571043 GABPB1Q06547 395 aaPredicted RBP18.28■□□□□ 0.52
RPAIN-208ENST00000571043 SIX1Q15475 284 aaPredicted RBP18.28■□□□□ 0.52
RPAIN-208ENST00000571043 LCLAT1Q6UWP7 414 aa18.28■□□□□ 0.52
RPAIN-208ENST00000571043 ZNF598Q86UK7 904 aaKnown RBP18.28■□□□□ 0.52
RPAIN-208ENST00000571043 UNC93AQ86WB7 457 aa18.28■□□□□ 0.52
Retrieved 100 of 20,778 RNA–protein pairs in 18 ms