RNA–Protein interactions for RNA: ENST00000570937.1

NUP88-202, Transcript of nucleoporin 88, humanhuman

TSL 3

Gene NUP88, Length 361 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP88-202ENST00000570937 MAP3K14Q99558 947 aa5.11□□□□□ -1.59
NUP88-202ENST00000570937 VKORC1Q9BQB6 163 aa5.11□□□□□ -1.59
NUP88-202ENST00000570937 RTFDC1Q9BY42 306 aaPredicted RBP5.11□□□□□ -1.59
NUP88-202ENST00000570937 IMPG2Q9BZV3 1241 aa5.11□□□□□ -1.59
NUP88-202ENST00000570937 GPR35Q9HC97 309 aa5.11□□□□□ -1.59
NUP88-202ENST00000570937 ABCF2Q9UG63 623 aa5.11□□□□□ -1.59
NUP88-202ENST00000570937 ZDHHC8Q9ULC8 765 aa5.11□□□□□ -1.59
NUP88-202ENST00000570937 CDYLQ9Y232 598 aa5.11□□□□□ -1.59
NUP88-202ENST00000570937 SBNO1A3KN83 1393 aa5.11□□□□□ -1.59
NUP88-202ENST00000570937 ARHGEF10O15013 1369 aa5.11□□□□□ -1.59
NUP88-202ENST00000570937 CCDC195A0A1B0GUA6 201 aa5.1□□□□□ -1.59
NUP88-202ENST00000570937 ADGRB2O60241 1585 aa5.1□□□□□ -1.59
NUP88-202ENST00000570937 SUN1O94901 812 aa5.1□□□□□ -1.59
NUP88-202ENST00000570937 MATN4O95460 622 aa5.1□□□□□ -1.59
NUP88-202ENST00000570937 CHEK2O96017 543 aa5.1□□□□□ -1.59
NUP88-202ENST00000570937 GJB1P08034 283 aa5.1□□□□□ -1.59
NUP88-202ENST00000570937 IL12RB1P42701 662 aa5.1□□□□□ -1.59
NUP88-202ENST00000570937 ANXA11P50995 505 aaKnown RBP5.1□□□□□ -1.59
NUP88-202ENST00000570937 RPS7P62081 194 aaKnown RBP5.1□□□□□ -1.59
NUP88-202ENST00000570937 NKX6-1P78426 367 aaPredicted RBP5.1□□□□□ -1.59
NUP88-202ENST00000570937 COL16A1Q07092 1604 aaPredicted RBP5.1□□□□□ -1.59
NUP88-202ENST00000570937 TCF15Q12870 199 aa5.1□□□□□ -1.59
NUP88-202ENST00000570937 MED1Q15648 1581 aaPredicted RBP5.1□□□□□ -1.59
NUP88-202ENST00000570937 CRB2Q5IJ48 1285 aa5.1□□□□□ -1.59
NUP88-202ENST00000570937 SPATA31A3Q5VYP0 1347 aa5.1□□□□□ -1.59
NUP88-202ENST00000570937 PNPLA6Q8IY17 1366 aa5.1□□□□□ -1.59
NUP88-202ENST00000570937 C1GALT1C1Q96EU7 318 aa5.1□□□□□ -1.59
NUP88-202ENST00000570937 PUS7Q96PZ0 661 aaKnown RBP5.1□□□□□ -1.59
NUP88-202ENST00000570937 C1orf43Q9BWL3 253 aa5.1□□□□□ -1.59
NUP88-202ENST00000570937 MRPL46Q9H2W6 279 aaKnown RBP5.1□□□□□ -1.59
NUP88-202ENST00000570937 TULP4Q9NRJ4 1543 aa5.1□□□□□ -1.59
NUP88-202ENST00000570937 LMBRD1Q9NUN5 540 aa5.1□□□□□ -1.59
NUP88-202ENST00000570937 FMN2Q9NZ56 1722 aa5.1□□□□□ -1.59
NUP88-202ENST00000570937 C11orf21Q9P2W6 132 aa5.1□□□□□ -1.59
NUP88-202ENST00000570937 TESQ9UGI8 421 aaKnown RBP5.1□□□□□ -1.59
NUP88-202ENST00000570937 FEZ2Q9UHY8 353 aaPredicted RBP5.1□□□□□ -1.59
NUP88-202ENST00000570937 ZNF180Q9UJW8 692 aa5.1□□□□□ -1.59
NUP88-202ENST00000570937 KIF1AQ12756 1690 aa5.09□□□□□ -1.59
NUP88-202ENST00000570937 NHSL1Q5SYE7 1610 aa5.09□□□□□ -1.59
NUP88-202ENST00000570937 BRD4O60885 1362 aaPredicted RBP5.09□□□□□ -1.59
NUP88-202ENST00000570937 ACEP12821 1306 aa5.09□□□□□ -1.59
NUP88-202ENST00000570937 TRGV11A0A075B6L2 103 aa5.09□□□□□ -1.59
NUP88-202ENST00000570937 OFD1O75665 1012 aa5.09□□□□□ -1.59
NUP88-202ENST00000570937 CT47B1P0C2W7 299 aaPredicted RBP5.09□□□□□ -1.59
NUP88-202ENST00000570937 SRGNP10124 158 aa5.09□□□□□ -1.59
NUP88-202ENST00000570937 RARBP10826 455 aa5.09□□□□□ -1.59
NUP88-202ENST00000570937 LPOP22079 712 aaPredicted RBP5.09□□□□□ -1.59
NUP88-202ENST00000570937 TMF1P82094 1093 aa5.09□□□□□ -1.59
NUP88-202ENST00000570937 DYRK1AQ13627 763 aa5.09□□□□□ -1.59
NUP88-202ENST00000570937 GTF2H3Q13889 308 aa5.09□□□□□ -1.59
NUP88-202ENST00000570937 HABP2Q14520 560 aaPredicted RBP5.09□□□□□ -1.59
NUP88-202ENST00000570937 HLXQ14774 488 aaPredicted RBP5.09□□□□□ -1.59
NUP88-202ENST00000570937 PLEKHG6Q3KR16 790 aa5.09□□□□□ -1.59
NUP88-202ENST00000570937 OLFML1Q6UWY5 402 aa5.09□□□□□ -1.59
NUP88-202ENST00000570937 Q6ZNX1 250 aa5.09□□□□□ -1.59
NUP88-202ENST00000570937 POC1BQ8TC44 478 aa5.09□□□□□ -1.59
NUP88-202ENST00000570937 JPH3Q8WXH2 748 aaPredicted RBP5.09□□□□□ -1.59
NUP88-202ENST00000570937 PTCD3Q96EY7 689 aaKnown RBP5.09□□□□□ -1.59
NUP88-202ENST00000570937 LRIG1Q96JA1 1093 aa5.09□□□□□ -1.59
NUP88-202ENST00000570937 SIK2Q9H0K1 926 aa5.09□□□□□ -1.59
NUP88-202ENST00000570937 ALG13Q9NP73 1137 aaKnown RBP5.09□□□□□ -1.59
NUP88-202ENST00000570937 INTS13Q9NVM9 706 aa5.09□□□□□ -1.59
NUP88-202ENST00000570937 PNPOQ9NVS9 261 aa5.09□□□□□ -1.59
NUP88-202ENST00000570937 KCTD5Q9NXV2 234 aa5.09□□□□□ -1.59
NUP88-202ENST00000570937 TERF2IPQ9NYB0 399 aa5.09□□□□□ -1.59
NUP88-202ENST00000570937 THRAP3Q9Y2W1 955 aaKnown RBP5.09□□□□□ -1.59
NUP88-202ENST00000570937 POLR2AP24928 1970 aaKnown RBP5.09□□□□□ -1.6
NUP88-202ENST00000570937 TRPM1Q7Z4N2 1603 aa5.08□□□□□ -1.6
NUP88-202ENST00000570937 RALGAPBQ86X10 1494 aa5.08□□□□□ -1.6
NUP88-202ENST00000570937 PXDNQ92626 1479 aa5.08□□□□□ -1.6
NUP88-202ENST00000570937 TNS3Q68CZ2 1445 aa5.08□□□□□ -1.6
NUP88-202ENST00000570937 PPIP5K1Q6PFW1 1433 aa5.08□□□□□ -1.6
NUP88-202ENST00000570937 AFF2P51816 1311 aa5.08□□□□□ -1.6
NUP88-202ENST00000570937 PROM1O43490 865 aa5.08□□□□□ -1.6
NUP88-202ENST00000570937 FPGSQ05932 587 aa5.08□□□□□ -1.6
NUP88-202ENST00000570937 ODR4Q5SWX8 454 aa5.08□□□□□ -1.6
NUP88-202ENST00000570937 IFIT1BQ5T764 474 aaKnown RBP5.08□□□□□ -1.6
NUP88-202ENST00000570937 EMC10Q5UCC4 262 aa5.08□□□□□ -1.6
NUP88-202ENST00000570937 KIAA0895LQ68EN5 471 aa5.08□□□□□ -1.6
NUP88-202ENST00000570937 TAPT1Q6NXT6 567 aa5.08□□□□□ -1.6
NUP88-202ENST00000570937 B3GNT9Q6UX72 402 aa5.08□□□□□ -1.6
NUP88-202ENST00000570937 MICALCLQ6ZW33 695 aa5.08□□□□□ -1.6
NUP88-202ENST00000570937 PPP1R3BQ86XI6 285 aa5.08□□□□□ -1.6
NUP88-202ENST00000570937 SLC44A3Q8N4M1 653 aa5.08□□□□□ -1.6
NUP88-202ENST00000570937 SSH3Q8TE77 659 aa5.08□□□□□ -1.6
NUP88-202ENST00000570937 DIS3LQ8TF46 1054 aaKnown RBP5.08□□□□□ -1.6
NUP88-202ENST00000570937 CDK5RAP3Q96JB5 506 aa5.08□□□□□ -1.6
NUP88-202ENST00000570937 TRIB1Q96RU8 372 aa5.08□□□□□ -1.6
NUP88-202ENST00000570937 SMOQ99835 787 aa5.08□□□□□ -1.6
NUP88-202ENST00000570937 AIFM2Q9BRQ8 373 aa5.08□□□□□ -1.6
NUP88-202ENST00000570937 SYNPO2LQ9H987 977 aa5.08□□□□□ -1.6
NUP88-202ENST00000570937 CASS4Q9NQ75 786 aa5.08□□□□□ -1.6
NUP88-202ENST00000570937 ETAA1Q9NY74 926 aa5.08□□□□□ -1.6
NUP88-202ENST00000570937 ZIM2Q9NZV7 527 aa5.08□□□□□ -1.6
NUP88-202ENST00000570937 DMTF1Q9Y222 760 aa5.08□□□□□ -1.6
NUP88-202ENST00000570937 UTP18Q9Y5J1 556 aaKnown RBP eCLIP5.08□□□□□ -1.6
NUP88-202ENST00000570937 NR2E3Q9Y5X4 410 aa5.08□□□□□ -1.6
NUP88-202ENST00000570937 ARHGEF28Q8N1W1 1705 aaKnown RBP5.08□□□□□ -1.6
NUP88-202ENST00000570937 SHPRHQ149N8 1683 aa5.08□□□□□ -1.6
NUP88-202ENST00000570937 POLR3AO14802 1390 aaPredicted RBP5.07□□□□□ -1.6
Retrieved 100 of 20,778 RNA–protein pairs in 36.1 ms