RNA–Protein interactions for RNA: ENST00000570727.5

NDE1-203, Transcript of nudE neurodevelopment protein 1, humanhuman

TSL 4

Gene NDE1, Length 588 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NDE1-203ENST00000570727 LMNB2Q03252 620 aa15.87■□□□□ 0.13
NDE1-203ENST00000570727 SIM2Q14190 667 aaPredicted RBP15.87■□□□□ 0.13
NDE1-203ENST00000570727 TMEM196Q5HYL7 178 aa15.87■□□□□ 0.13
NDE1-203ENST00000570727 LMBRD2Q68DH5 695 aaPredicted RBP15.87■□□□□ 0.13
NDE1-203ENST00000570727 HEATR6Q6AI08 1181 aaKnown RBP15.87■□□□□ 0.13
NDE1-203ENST00000570727 FSTL4Q6MZW2 842 aa15.87■□□□□ 0.13
NDE1-203ENST00000570727 PKN3Q6P5Z2 889 aa15.87■□□□□ 0.13
NDE1-203ENST00000570727 FAM171BQ6P995 826 aa15.87■□□□□ 0.13
NDE1-203ENST00000570727 PRR23BQ6ZRT6 265 aa15.87■□□□□ 0.13
NDE1-203ENST00000570727 LIMS2Q7Z4I7 341 aa15.87■□□□□ 0.13
NDE1-203ENST00000570727 LONP2Q86WA8 852 aa15.87■□□□□ 0.13
NDE1-203ENST00000570727 CCDC65Q8IXS2 484 aa15.87■□□□□ 0.13
NDE1-203ENST00000570727 GPD1LQ8N335 351 aa15.87■□□□□ 0.13
NDE1-203ENST00000570727 TOP6BLQ8N6T0 577 aa15.87■□□□□ 0.13
NDE1-203ENST00000570727 LINC00301Q8NCQ3 95 aa15.87■□□□□ 0.13
NDE1-203ENST00000570727 OR5B17Q8NGF7 314 aa15.87■□□□□ 0.13
NDE1-203ENST00000570727 HPS3Q969F9 1004 aa15.87■□□□□ 0.13
NDE1-203ENST00000570727 MTMR12Q9C0I1 747 aa15.87■□□□□ 0.13
NDE1-203ENST00000570727 ZSCAN16Q9H4T2 348 aaPredicted RBP15.87■□□□□ 0.13
NDE1-203ENST00000570727 EBF3Q9H4W6 596 aa15.87■□□□□ 0.13
NDE1-203ENST00000570727 FBRSL1Q9HCM7 1045 aaKnown RBP15.87■□□□□ 0.13
NDE1-203ENST00000570727 FOXD4L1Q9NU39 408 aa15.87■□□□□ 0.13
NDE1-203ENST00000570727 INTS13Q9NVM9 706 aa15.87■□□□□ 0.13
NDE1-203ENST00000570727 PTPRJQ12913 1337 aa15.87■□□□□ 0.13
NDE1-203ENST00000570727 TRDMT1O14717 391 aaKnown RBP15.86■□□□□ 0.13
NDE1-203ENST00000570727 ATP2C2O75185 946 aa15.86■□□□□ 0.13
NDE1-203ENST00000570727 ARSAP15289 507 aa15.86■□□□□ 0.13
NDE1-203ENST00000570727 LHX1P48742 406 aa15.86■□□□□ 0.13
NDE1-203ENST00000570727 RPL10AP62906 217 aaKnown RBP15.86■□□□□ 0.13
NDE1-203ENST00000570727 ZNF268Q14587 947 aaPredicted RBP15.86■□□□□ 0.13
NDE1-203ENST00000570727 E2F4Q16254 413 aa15.86■□□□□ 0.13
NDE1-203ENST00000570727 WDR5BQ86VZ2 330 aa15.86■□□□□ 0.13
NDE1-203ENST00000570727 ADGRF2Q8IZF7 708 aa15.86■□□□□ 0.13
NDE1-203ENST00000570727 SPATA18Q8TC71 538 aa15.86■□□□□ 0.13
NDE1-203ENST00000570727 NOC3LQ8WTT2 800 aaKnown RBP15.86■□□□□ 0.13
NDE1-203ENST00000570727 MRPS31Q92665 395 aaKnown RBP15.86■□□□□ 0.13
NDE1-203ENST00000570727 TRMT2BQ96GJ1 504 aaKnown RBP15.86■□□□□ 0.13
NDE1-203ENST00000570727 SLC22A12Q96S37 553 aa15.86■□□□□ 0.13
NDE1-203ENST00000570727 CYP2S1Q96SQ9 504 aa15.86■□□□□ 0.13
NDE1-203ENST00000570727 KBTBD4Q9NVX7 518 aa15.86■□□□□ 0.13
NDE1-203ENST00000570727 TFIP11Q9UBB9 837 aaKnown RBP15.86■□□□□ 0.13
NDE1-203ENST00000570727 SPAG17Q6Q759 2223 aa15.85■□□□□ 0.13
NDE1-203ENST00000570727 ZNF233A6NK53 670 aa15.85■□□□□ 0.13
NDE1-203ENST00000570727 KIAA0391O15091 583 aaKnown RBP15.85■□□□□ 0.13
NDE1-203ENST00000570727 STX6O43752 255 aa15.85■□□□□ 0.13
NDE1-203ENST00000570727 TMEM191BP0C7N4 346 aa15.85■□□□□ 0.13
NDE1-203ENST00000570727 LMO2P25791 158 aa15.85■□□□□ 0.13
NDE1-203ENST00000570727 CFAP221Q4G0U5 840 aa15.85■□□□□ 0.13
NDE1-203ENST00000570727 DPH6Q7L8W6 267 aa15.85■□□□□ 0.13
NDE1-203ENST00000570727 CBWD2Q8IUF1 395 aa15.85■□□□□ 0.13
NDE1-203ENST00000570727 KBTBD7Q8WVZ9 684 aa15.85■□□□□ 0.13
NDE1-203ENST00000570727 KIF9Q9HAQ2 790 aa15.85■□□□□ 0.13
NDE1-203ENST00000570727 UXTQ9UBK9 157 aaPredicted RBP15.85■□□□□ 0.13
NDE1-203ENST00000570727 DYNC1LI1Q9Y6G9 523 aaKnown RBP15.85■□□□□ 0.13
NDE1-203ENST00000570727 PTPRDP23468 1912 aa15.84■□□□□ 0.13
NDE1-203ENST00000570727 EML5Q05BV3 1969 aa15.84■□□□□ 0.13
NDE1-203ENST00000570727 DCDC2BA2VCK2 349 aa15.84■□□□□ 0.13
NDE1-203ENST00000570727 LRP3O75074 770 aa15.84■□□□□ 0.13
NDE1-203ENST00000570727 PCSK1P29120 753 aa15.84■□□□□ 0.13
NDE1-203ENST00000570727 GALK1P51570 392 aa15.84■□□□□ 0.13
NDE1-203ENST00000570727 GRSF1Q12849 480 aaKnown RBP eCLIP15.84■□□□□ 0.13
NDE1-203ENST00000570727 DUOXA2Q1HG44 320 aa15.84■□□□□ 0.13
NDE1-203ENST00000570727 NAIF1Q69YI7 327 aaPredicted RBP15.84■□□□□ 0.13
NDE1-203ENST00000570727 EPM2AIP1Q7L775 607 aaPredicted RBP15.84■□□□□ 0.13
NDE1-203ENST00000570727 SPATA2LQ8IUW3 424 aaPredicted RBP15.84■□□□□ 0.13
NDE1-203ENST00000570727 ZNF507Q8TCN5 953 aa15.84■□□□□ 0.13
NDE1-203ENST00000570727 FUBP3Q96I24 572 aaKnown RBP eCLIP15.84■□□□□ 0.13
NDE1-203ENST00000570727 HPDLQ96IR7 371 aa15.84■□□□□ 0.13
NDE1-203ENST00000570727 ANKRD36BP1Q96IX9 119 aa15.84■□□□□ 0.13
NDE1-203ENST00000570727 TRIM9Q9C026 710 aa15.84■□□□□ 0.13
NDE1-203ENST00000570727 TNMDQ9H2S6 317 aa15.84■□□□□ 0.13
NDE1-203ENST00000570727 SEMA4GQ9NTN9 838 aa15.84■□□□□ 0.13
NDE1-203ENST00000570727 HSPBP1Q9NZL4 362 aa15.84■□□□□ 0.13
NDE1-203ENST00000570727 GCNT4Q9P109 453 aa15.84■□□□□ 0.13
NDE1-203ENST00000570727 CDV3Q9UKY7 258 aaKnown RBP15.84■□□□□ 0.13
NDE1-203ENST00000570727 SPTLC2O15270 562 aa15.83■□□□□ 0.12
NDE1-203ENST00000570727 TGFB1I1O43294 461 aa15.83■□□□□ 0.12
NDE1-203ENST00000570727 PPP6R2O75170 966 aa15.83■□□□□ 0.12
NDE1-203ENST00000570727 CST3P01034 146 aaPredicted RBP15.83■□□□□ 0.12
NDE1-203ENST00000570727 EGFP01133 1207 aa15.83■□□□□ 0.12
NDE1-203ENST00000570727 MAGEA11P43364 429 aa15.83■□□□□ 0.12
NDE1-203ENST00000570727 PXNP49023 591 aaPredicted RBP15.83■□□□□ 0.12
NDE1-203ENST00000570727 FAM160A1Q05DH4 1040 aa15.83■□□□□ 0.12
NDE1-203ENST00000570727 MYO1EQ12965 1108 aa15.83■□□□□ 0.12
NDE1-203ENST00000570727 PDGFRLQ15198 375 aa15.83■□□□□ 0.12
NDE1-203ENST00000570727 STK38Q15208 465 aa15.83■□□□□ 0.12
NDE1-203ENST00000570727 SURF1Q15526 300 aa15.83■□□□□ 0.12
NDE1-203ENST00000570727 ZNF77Q15935 545 aa15.83■□□□□ 0.12
NDE1-203ENST00000570727 CC2D1AQ6P1N0 951 aaPredicted RBP15.83■□□□□ 0.12
NDE1-203ENST00000570727 SCN4BQ8IWT1 228 aa15.83■□□□□ 0.12
NDE1-203ENST00000570727 FAM160A2Q8N612 972 aaPredicted RBP15.83■□□□□ 0.12
NDE1-203ENST00000570727 RTKNQ9BST9 563 aa15.83■□□□□ 0.12
NDE1-203ENST00000570727 CRTAC1Q9NQ79 661 aa15.83■□□□□ 0.12
NDE1-203ENST00000570727 POLR3BQ9NW08 1133 aaPredicted RBP15.83■□□□□ 0.12
NDE1-203ENST00000570727 MAGEC2Q9UBF1 373 aaPredicted RBP15.83■□□□□ 0.12
NDE1-203ENST00000570727 C2orf78A6NCI8 922 aa15.82■□□□□ 0.12
NDE1-203ENST00000570727 K7ELQ4 463 aaPredicted RBP15.82■□□□□ 0.12
NDE1-203ENST00000570727 EIF3DO15371 548 aaKnown RBP eCLIP15.82■□□□□ 0.12
NDE1-203ENST00000570727 TNNC2P02585 160 aa15.82■□□□□ 0.12
NDE1-203ENST00000570727 PDGFRBP09619 1106 aa15.82■□□□□ 0.12
Retrieved 100 of 20,778 RNA–protein pairs in 31.2 ms