RNA–Protein interactions for RNA: ENST00000570324.1

NPLOC4-204, Transcript of NPL4 homolog, ubiquitin recognition factor, humanhuman

TSL 3

Gene NPLOC4, Length 414 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPLOC4-204ENST00000570324 BIRC3Q13489 604 aa9.56□□□□□ -0.88
NPLOC4-204ENST00000570324 CUL4BQ13620 913 aa9.56□□□□□ -0.88
NPLOC4-204ENST00000570324 PSMD6Q15008 389 aa9.56□□□□□ -0.88
NPLOC4-204ENST00000570324 KNOP1Q1ED39 458 aaKnown RBP9.56□□□□□ -0.88
NPLOC4-204ENST00000570324 ITPRIPL2Q3MIP1 535 aa9.56□□□□□ -0.88
NPLOC4-204ENST00000570324 DGKKQ5KSL6 1271 aa9.56□□□□□ -0.88
NPLOC4-204ENST00000570324 TXNDC8Q6A555 127 aa9.56□□□□□ -0.88
NPLOC4-204ENST00000570324 EPM2AIP1Q7L775 607 aaPredicted RBP9.56□□□□□ -0.88
NPLOC4-204ENST00000570324 OSTM1Q86WC4 334 aa9.56□□□□□ -0.88
NPLOC4-204ENST00000570324 MAML2Q8IZL2 1156 aaPredicted RBP9.56□□□□□ -0.88
NPLOC4-204ENST00000570324 OR6B3Q8NGW1 331 aa9.56□□□□□ -0.88
NPLOC4-204ENST00000570324 SCFD1Q8WVM8 642 aa9.56□□□□□ -0.88
NPLOC4-204ENST00000570324 EXOC4Q96A65 974 aa9.56□□□□□ -0.88
NPLOC4-204ENST00000570324 FUBP3Q96I24 572 aaKnown RBP eCLIP9.56□□□□□ -0.88
NPLOC4-204ENST00000570324 SPATA32Q96LK8 384 aa9.56□□□□□ -0.88
NPLOC4-204ENST00000570324 CGRRF1Q99675 332 aa9.56□□□□□ -0.88
NPLOC4-204ENST00000570324 MKNK1Q9BUB5 465 aa9.56□□□□□ -0.88
NPLOC4-204ENST00000570324 FAM126AQ9BYI3 521 aaPredicted RBP9.56□□□□□ -0.88
NPLOC4-204ENST00000570324 KIF9Q9HAQ2 790 aa9.56□□□□□ -0.88
NPLOC4-204ENST00000570324 IL21Q9HBE4 155 aa9.56□□□□□ -0.88
NPLOC4-204ENST00000570324 GKN1Q9NS71 199 aa9.56□□□□□ -0.88
NPLOC4-204ENST00000570324 TDP1Q9NUW8 608 aa9.56□□□□□ -0.88
NPLOC4-204ENST00000570324 EHD2Q9NZN4 543 aa9.56□□□□□ -0.88
NPLOC4-204ENST00000570324 SIX4Q9UIU6 781 aa9.56□□□□□ -0.88
NPLOC4-204ENST00000570324 RCOR1Q9UKL0 485 aa9.56□□□□□ -0.88
NPLOC4-204ENST00000570324 PATJQ8NI35 1801 aa9.56□□□□□ -0.88
NPLOC4-204ENST00000570324 NCANO14594 1321 aa9.56□□□□□ -0.88
NPLOC4-204ENST00000570324 PTPRJQ12913 1337 aa9.56□□□□□ -0.88
NPLOC4-204ENST00000570324 TRAV19A0A0A6YYK7 116 aa9.55□□□□□ -0.88
NPLOC4-204ENST00000570324 GABRDO14764 452 aa9.55□□□□□ -0.88
NPLOC4-204ENST00000570324 TGFB1I1O43294 461 aa9.55□□□□□ -0.88
NPLOC4-204ENST00000570324 ATP2C2O75185 946 aa9.55□□□□□ -0.88
NPLOC4-204ENST00000570324 KIF20AO95235 890 aa9.55□□□□□ -0.88
NPLOC4-204ENST00000570324 F11P03951 625 aa9.55□□□□□ -0.88
NPLOC4-204ENST00000570324 USP17L7P0C7H9 530 aa9.55□□□□□ -0.88
NPLOC4-204ENST00000570324 SLFN14P0C7P3 912 aa9.55□□□□□ -0.88
NPLOC4-204ENST00000570324 CHRNB1P11230 501 aa9.55□□□□□ -0.88
NPLOC4-204ENST00000570324 HMGA1P17096 107 aaKnown RBP9.55□□□□□ -0.88
NPLOC4-204ENST00000570324 WARSP23381 471 aaKnown RBP9.55□□□□□ -0.88
NPLOC4-204ENST00000570324 CTHP32929 405 aa9.55□□□□□ -0.88
NPLOC4-204ENST00000570324 GNL1P36915 607 aaPredicted RBP9.55□□□□□ -0.88
NPLOC4-204ENST00000570324 ID4P47928 161 aa9.55□□□□□ -0.88
NPLOC4-204ENST00000570324 CYP24A1Q07973 514 aa9.55□□□□□ -0.88
NPLOC4-204ENST00000570324 PSMD2Q13200 908 aa9.55□□□□□ -0.88
NPLOC4-204ENST00000570324 FZD5Q13467 585 aa9.55□□□□□ -0.88
NPLOC4-204ENST00000570324 KCNB1Q14721 858 aa9.55□□□□□ -0.88
NPLOC4-204ENST00000570324 PON2Q15165 354 aa9.55□□□□□ -0.88
NPLOC4-204ENST00000570324 WDR72Q3MJ13 1102 aa9.55□□□□□ -0.88
NPLOC4-204ENST00000570324 CFAP221Q4G0U5 840 aa9.55□□□□□ -0.88
NPLOC4-204ENST00000570324 VSTM1Q6UX27 236 aa9.55□□□□□ -0.88
NPLOC4-204ENST00000570324 MON1AQ86VX9 555 aa9.55□□□□□ -0.88
NPLOC4-204ENST00000570324 GRAMD1CQ8IYS0 662 aa9.55□□□□□ -0.88
NPLOC4-204ENST00000570324 KIAA2013Q8IYS2 634 aa9.55□□□□□ -0.88
NPLOC4-204ENST00000570324 STKLD1Q8NE28 680 aa9.55□□□□□ -0.88
NPLOC4-204ENST00000570324 CXorf38Q8TB03 319 aa9.55□□□□□ -0.88
NPLOC4-204ENST00000570324 TRMT2BQ96GJ1 504 aaKnown RBP9.55□□□□□ -0.88
NPLOC4-204ENST00000570324 NXF1Q9UBU9 619 aaKnown RBP9.55□□□□□ -0.88
NPLOC4-204ENST00000570324 USP25Q9UHP3 1055 aa9.55□□□□□ -0.88
NPLOC4-204ENST00000570324 ATP6V1DQ9Y5K8 247 aa9.55□□□□□ -0.88
NPLOC4-204ENST00000570324 ZNF638Q14966 1978 aaKnown RBP9.55□□□□□ -0.88
NPLOC4-204ENST00000570324 ZFHX2Q9C0A1 2572 aaPredicted RBP9.54□□□□□ -0.88
NPLOC4-204ENST00000570324 A0A1B0GVL5 298 aa9.54□□□□□ -0.88
NPLOC4-204ENST00000570324 A8MXQ7 604 aa9.54□□□□□ -0.88
NPLOC4-204ENST00000570324 ARNTLO00327 626 aa9.54□□□□□ -0.88
NPLOC4-204ENST00000570324 TRIM66O15016 1216 aa9.54□□□□□ -0.88
NPLOC4-204ENST00000570324 HCRTO43612 131 aa9.54□□□□□ -0.88
NPLOC4-204ENST00000570324 NOL4O94818 638 aa9.54□□□□□ -0.88
NPLOC4-204ENST00000570324 CST3P01034 146 aaPredicted RBP9.54□□□□□ -0.88
NPLOC4-204ENST00000570324 TRIM21P19474 475 aaKnown RBP9.54□□□□□ -0.88
NPLOC4-204ENST00000570324 BDNFP23560 247 aa9.54□□□□□ -0.88
NPLOC4-204ENST00000570324 LMO2P25791 158 aa9.54□□□□□ -0.88
NPLOC4-204ENST00000570324 ATICP31939 592 aa9.54□□□□□ -0.88
NPLOC4-204ENST00000570324 MAGEA11P43364 429 aa9.54□□□□□ -0.88
NPLOC4-204ENST00000570324 IFNAR2P48551 515 aa9.54□□□□□ -0.88
NPLOC4-204ENST00000570324 PDE6CP51160 858 aa9.54□□□□□ -0.88
NPLOC4-204ENST00000570324 AP3M2P53677 418 aa9.54□□□□□ -0.88
NPLOC4-204ENST00000570324 TNK2Q07912 1038 aa9.54□□□□□ -0.88
NPLOC4-204ENST00000570324 GRSF1Q12849 480 aaKnown RBP eCLIP9.54□□□□□ -0.88
NPLOC4-204ENST00000570324 RUNX3Q13761 415 aa9.54□□□□□ -0.88
NPLOC4-204ENST00000570324 PKP1Q13835 747 aa9.54□□□□□ -0.88
NPLOC4-204ENST00000570324 BMT2Q1RMZ1 405 aa9.54□□□□□ -0.88
NPLOC4-204ENST00000570324 MDH1BQ5I0G3 518 aa9.54□□□□□ -0.88
NPLOC4-204ENST00000570324 SCARA3Q6AZY7 606 aa9.54□□□□□ -0.88
NPLOC4-204ENST00000570324 FAM171BQ6P995 826 aa9.54□□□□□ -0.88
NPLOC4-204ENST00000570324 MAMSTRQ6ZN01 415 aa9.54□□□□□ -0.88
NPLOC4-204ENST00000570324 DENND5BQ6ZUT9 1274 aa9.54□□□□□ -0.88
NPLOC4-204ENST00000570324 SPEM1Q8N4L4 309 aa9.54□□□□□ -0.88
NPLOC4-204ENST00000570324 ZBTB44Q8NCP5 570 aa9.54□□□□□ -0.88
NPLOC4-204ENST00000570324 MYCBPAPQ8TBZ2 947 aa9.54□□□□□ -0.88
NPLOC4-204ENST00000570324 KBTBD7Q8WVZ9 684 aa9.54□□□□□ -0.88
NPLOC4-204ENST00000570324 USP13Q92995 863 aaPredicted RBP9.54□□□□□ -0.88
NPLOC4-204ENST00000570324 MYLPFQ96A32 169 aa9.54□□□□□ -0.88
NPLOC4-204ENST00000570324 SYAP1Q96A49 352 aaPredicted RBP9.54□□□□□ -0.88
NPLOC4-204ENST00000570324 PAGE5Q96GU1 130 aa9.54□□□□□ -0.88
NPLOC4-204ENST00000570324 CCDC34Q96HJ3 373 aa9.54□□□□□ -0.88
NPLOC4-204ENST00000570324 LRRC3BQ96PB8 259 aa9.54□□□□□ -0.88
NPLOC4-204ENST00000570324 MRPL45Q9BRJ2 306 aaKnown RBP9.54□□□□□ -0.88
NPLOC4-204ENST00000570324 EBF3Q9H4W6 596 aa9.54□□□□□ -0.88
NPLOC4-204ENST00000570324 PRMT8Q9NR22 394 aaPredicted RBP9.54□□□□□ -0.88
NPLOC4-204ENST00000570324 RBM12Q9NTZ6 932 aaKnown RBP9.54□□□□□ -0.88
Retrieved 100 of 20,778 RNA–protein pairs in 25 ms