RNA–Protein interactions for RNA: ENST00000570296.1

CLK3-227, Transcript of CDC like kinase 3, humanhuman

TSL 5

Gene CLK3, Length 916 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLK3-227ENST00000570296 TMEM206Q9H813 350 aa19.59■□□□□ 0.73
CLK3-227ENST00000570296 ODC1P11926 461 aa19.58■□□□□ 0.72
CLK3-227ENST00000570296 CYP3A5P20815 502 aa19.58■□□□□ 0.72
CLK3-227ENST00000570296 SMARCB1Q12824 385 aa19.58■□□□□ 0.72
CLK3-227ENST00000570296 DMP1Q13316 513 aaPredicted RBP19.58■□□□□ 0.72
CLK3-227ENST00000570296 EARS2Q5JPH6 523 aaKnown RBP19.58■□□□□ 0.72
CLK3-227ENST00000570296 EOGTQ5NDL2 527 aa19.58■□□□□ 0.72
CLK3-227ENST00000570296 CPLX2Q6PUV4 134 aaKnown RBP19.58■□□□□ 0.72
CLK3-227ENST00000570296 EFCAB13Q8IY85 973 aa19.58■□□□□ 0.72
CLK3-227ENST00000570296 GALNT15Q8N3T1 639 aa19.58■□□□□ 0.72
CLK3-227ENST00000570296 IL17RCQ8NAC3 791 aa19.58■□□□□ 0.72
CLK3-227ENST00000570296 OR10T2Q8NGX3 314 aa19.58■□□□□ 0.72
CLK3-227ENST00000570296 OXER1Q8TDS5 423 aa19.58■□□□□ 0.72
CLK3-227ENST00000570296 KIF2CQ99661 725 aa19.58■□□□□ 0.72
CLK3-227ENST00000570296 TARS2Q9BW92 718 aaKnown RBP19.58■□□□□ 0.72
CLK3-227ENST00000570296 ZCWPW1Q9H0M4 648 aa19.58■□□□□ 0.72
CLK3-227ENST00000570296 PRORYQ9H606 182 aa19.58■□□□□ 0.72
CLK3-227ENST00000570296 TMEM134Q9H6X4 195 aa19.58■□□□□ 0.72
CLK3-227ENST00000570296 PCOLCE2Q9UKZ9 415 aa19.58■□□□□ 0.72
CLK3-227ENST00000570296 ANTXRLA6NF34 631 aa19.57■□□□□ 0.72
CLK3-227ENST00000570296 SGK1O00141 431 aa19.57■□□□□ 0.72
CLK3-227ENST00000570296 CAPN9O14815 690 aa19.57■□□□□ 0.72
CLK3-227ENST00000570296 MED24O75448 989 aa19.57■□□□□ 0.72
CLK3-227ENST00000570296 KLF8O95600 359 aaPredicted RBP19.57■□□□□ 0.72
CLK3-227ENST00000570296 NFATC1O95644 943 aa19.57■□□□□ 0.72
CLK3-227ENST00000570296 HAPLN1P10915 354 aaPredicted RBP19.57■□□□□ 0.72
CLK3-227ENST00000570296 XBP1P17861 261 aa19.57■□□□□ 0.72
CLK3-227ENST00000570296 SPPL2BQ8TCT7 592 aa19.57■□□□□ 0.72
CLK3-227ENST00000570296 PLEKHA5Q9HAU0 1116 aa19.57■□□□□ 0.72
CLK3-227ENST00000570296 STK24Q9Y6E0 443 aa19.57■□□□□ 0.72
CLK3-227ENST00000570296 PIEZO2Q9H5I5 2752 aa19.56■□□□□ 0.72
CLK3-227ENST00000570296 DKK1O94907 266 aa19.56■□□□□ 0.72
CLK3-227ENST00000570296 CHRM1P11229 460 aaPredicted RBP19.56■□□□□ 0.72
CLK3-227ENST00000570296 HARSP12081 509 aaKnown RBP19.56■□□□□ 0.72
CLK3-227ENST00000570296 PAX3P23760 479 aa19.56■□□□□ 0.72
CLK3-227ENST00000570296 CAMK2BQ13554 666 aa19.56■□□□□ 0.72
CLK3-227ENST00000570296 PLEKHG6Q3KR16 790 aa19.56■□□□□ 0.72
CLK3-227ENST00000570296 PGBD3Q8N328 593 aa19.56■□□□□ 0.72
CLK3-227ENST00000570296 PDCD7Q8N8D1 485 aaKnown RBP19.56■□□□□ 0.72
CLK3-227ENST00000570296 DCBLD2Q96PD2 775 aa19.56■□□□□ 0.72
CLK3-227ENST00000570296 MTMR9Q96QG7 549 aa19.56■□□□□ 0.72
CLK3-227ENST00000570296 ZDHHC5Q9C0B5 715 aa19.56■□□□□ 0.72
CLK3-227ENST00000570296 FAM124BQ9H5Z6 455 aaPredicted RBP19.56■□□□□ 0.72
CLK3-227ENST00000570296 SUSD2Q9UGT4 822 aa19.56■□□□□ 0.72
CLK3-227ENST00000570296 UBQLN1Q9UMX0 589 aaKnown RBP19.56■□□□□ 0.72
CLK3-227ENST00000570296 ANAPC1Q9H1A4 1944 aa19.55■□□□□ 0.72
CLK3-227ENST00000570296 TCRBV21S2A2A0A5A6 115 aa19.55■□□□□ 0.72
CLK3-227ENST00000570296 FAM205CA6NFA0 338 aa19.55■□□□□ 0.72
CLK3-227ENST00000570296 E9PAM4 449 aa19.55■□□□□ 0.72
CLK3-227ENST00000570296 NEMFO60524 1076 aa19.55■□□□□ 0.72
CLK3-227ENST00000570296 USP17L7P0C7H9 530 aa19.55■□□□□ 0.72
CLK3-227ENST00000570296 TCF3P15923 654 aa19.55■□□□□ 0.72
CLK3-227ENST00000570296 ATMQ13315 3056 aa19.55■□□□□ 0.72
CLK3-227ENST00000570296 NOLC1Q14978 699 aaKnown RBP eCLIP19.55■□□□□ 0.72
CLK3-227ENST00000570296 ZBTB6Q15916 424 aa19.55■□□□□ 0.72
CLK3-227ENST00000570296 TMEM130Q8N3G9 435 aa19.55■□□□□ 0.72
CLK3-227ENST00000570296 DEFB119Q8N690 84 aa19.55■□□□□ 0.72
CLK3-227ENST00000570296 SENP8Q96LD8 212 aa19.55■□□□□ 0.72
CLK3-227ENST00000570296 PI4K2AQ9BTU6 479 aa19.55■□□□□ 0.72
CLK3-227ENST00000570296 ARHGAP28Q9P2N2 729 aa19.55■□□□□ 0.72
CLK3-227ENST00000570296 STK36Q9NRP7 1315 aa19.54■□□□□ 0.72
CLK3-227ENST00000570296 MGAQ8IWI9 3026 aa19.54■□□□□ 0.72
CLK3-227ENST00000570296 TRAV19A0A0A6YYK7 116 aa19.54■□□□□ 0.72
CLK3-227ENST00000570296 CCDC169A6NNP5 214 aa19.54■□□□□ 0.72
CLK3-227ENST00000570296 ARHGAP6O43182 974 aa19.54■□□□□ 0.72
CLK3-227ENST00000570296 XPOTO43592 962 aaKnown RBP19.54■□□□□ 0.72
CLK3-227ENST00000570296 CYP11A1P05108 521 aa19.54■□□□□ 0.72
CLK3-227ENST00000570296 CKMP06732 381 aa19.54■□□□□ 0.72
CLK3-227ENST00000570296 CSH1P0DML2 217 aa19.54■□□□□ 0.72
CLK3-227ENST00000570296 CSH2P0DML3 217 aa19.54■□□□□ 0.72
CLK3-227ENST00000570296 NPTX2P47972 431 aa19.54■□□□□ 0.72
CLK3-227ENST00000570296 LILRA4P59901 499 aa19.54■□□□□ 0.72
CLK3-227ENST00000570296 GAB4Q2WGN9 574 aa19.54■□□□□ 0.72
CLK3-227ENST00000570296 TAS1R3Q7RTX0 852 aa19.54■□□□□ 0.72
CLK3-227ENST00000570296 TTC16Q8NEE8 873 aa19.54■□□□□ 0.72
CLK3-227ENST00000570296 LINC00597Q9H2U6 94 aa19.54■□□□□ 0.72
CLK3-227ENST00000570296 CLMPQ9H6B4 373 aa19.54■□□□□ 0.72
CLK3-227ENST00000570296 POLD4Q9HCU8 107 aa19.54■□□□□ 0.72
CLK3-227ENST00000570296 TOR4AQ9NXH8 423 aa19.54■□□□□ 0.72
CLK3-227ENST00000570296 UXTQ9UBK9 157 aaPredicted RBP19.54■□□□□ 0.72
CLK3-227ENST00000570296 MUC22E2RYF6 1773 aaPredicted RBP19.54■□□□□ 0.72
CLK3-227ENST00000570296 CXCL8P10145 99 aa19.53■□□□□ 0.72
CLK3-227ENST00000570296 RPA1P27694 616 aa19.53■□□□□ 0.72
CLK3-227ENST00000570296 TIE1P35590 1138 aa19.53■□□□□ 0.72
CLK3-227ENST00000570296 SCRN1Q12765 414 aa19.53■□□□□ 0.72
CLK3-227ENST00000570296 SLC41A1Q8IVJ1 513 aa19.53■□□□□ 0.72
CLK3-227ENST00000570296 BAHD1Q8TBE0 780 aaPredicted RBP19.53■□□□□ 0.72
CLK3-227ENST00000570296 SH3RF2Q8TEC5 729 aa19.53■□□□□ 0.72
CLK3-227ENST00000570296 DSEQ9UL01 958 aa19.53■□□□□ 0.72
CLK3-227ENST00000570296 SNX14Q9Y5W7 946 aa19.53■□□□□ 0.72
CLK3-227ENST00000570296 TTC26A0AVF1 554 aa19.52■□□□□ 0.72
CLK3-227ENST00000570296 MYMKA6NI61 221 aa19.52■□□□□ 0.72
CLK3-227ENST00000570296 ADAM23O75077 832 aa19.52■□□□□ 0.72
CLK3-227ENST00000570296 TADA3O75528 432 aa19.52■□□□□ 0.72
CLK3-227ENST00000570296 TOM1L1O75674 476 aa19.52■□□□□ 0.72
CLK3-227ENST00000570296 GNSP15586 552 aa19.52■□□□□ 0.72
CLK3-227ENST00000570296 KIR2DL1P43626 348 aaPredicted RBP19.52■□□□□ 0.72
CLK3-227ENST00000570296 PEX3P56589 373 aa19.52■□□□□ 0.72
CLK3-227ENST00000570296 CFHR1Q03591 330 aa19.52■□□□□ 0.72
CLK3-227ENST00000570296 SPAG1Q07617 926 aa19.52■□□□□ 0.72
Retrieved 100 of 20,778 RNA–protein pairs in 27 ms