RNA–Protein interactions for RNA: ENST00000569337.1

UBR1-210, Transcript of ubiquitin protein ligase E3 component n-recognin 1, humanhuman

TSL 5

Gene UBR1, Length 549 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBR1-210ENST00000569337 SNX9Q9Y5X1 595 aa10.04□□□□□ -0.8
UBR1-210ENST00000569337 NUMBLQ9Y6R0 609 aa10.04□□□□□ -0.8
UBR1-210ENST00000569337 PLXNA3P51805 1871 aa10.04□□□□□ -0.8
UBR1-210ENST00000569337 TSC2P49815 1807 aa10.03□□□□□ -0.8
UBR1-210ENST00000569337 GOLGA6L3A6NEY3 463 aa10.03□□□□□ -0.8
UBR1-210ENST00000569337 STX10O60499 249 aa10.03□□□□□ -0.8
UBR1-210ENST00000569337 MICAL2O94851 1124 aa10.03□□□□□ -0.8
UBR1-210ENST00000569337 VNN2O95498 520 aa10.03□□□□□ -0.8
UBR1-210ENST00000569337 PDGFBP01127 241 aaPredicted RBP10.03□□□□□ -0.8
UBR1-210ENST00000569337 CFHP08603 1231 aa10.03□□□□□ -0.8
UBR1-210ENST00000569337 SRFP11831 508 aa10.03□□□□□ -0.8
UBR1-210ENST00000569337 MYL4P12829 197 aa10.03□□□□□ -0.8
UBR1-210ENST00000569337 SLC9A1P19634 815 aa10.03□□□□□ -0.8
UBR1-210ENST00000569337 PON1P27169 355 aa10.03□□□□□ -0.8
UBR1-210ENST00000569337 PBX1P40424 430 aa10.03□□□□□ -0.8
UBR1-210ENST00000569337 LHX1P48742 406 aa10.03□□□□□ -0.8
UBR1-210ENST00000569337 CDR1P51861 262 aa10.03□□□□□ -0.8
UBR1-210ENST00000569337 PLCB2Q00722 1185 aa10.03□□□□□ -0.8
UBR1-210ENST00000569337 TSPY1Q01534 308 aa10.03□□□□□ -0.8
UBR1-210ENST00000569337 UBXN1Q04323 297 aa10.03□□□□□ -0.8
UBR1-210ENST00000569337 BIRC3Q13489 604 aa10.03□□□□□ -0.8
UBR1-210ENST00000569337 HTR4Q13639 388 aa10.03□□□□□ -0.8
UBR1-210ENST00000569337 NCOA4Q13772 614 aa10.03□□□□□ -0.8
UBR1-210ENST00000569337 GSE1Q14687 1217 aa10.03□□□□□ -0.8
UBR1-210ENST00000569337 SLC5A9Q2M3M2 681 aa10.03□□□□□ -0.8
UBR1-210ENST00000569337 MGAT5BQ3V5L5 792 aa10.03□□□□□ -0.8
UBR1-210ENST00000569337 SPOPLQ6IQ16 392 aa10.03□□□□□ -0.8
UBR1-210ENST00000569337 DPH6Q7L8W6 267 aa10.03□□□□□ -0.8
UBR1-210ENST00000569337 LRRTM3Q86VH5 581 aa10.03□□□□□ -0.8
UBR1-210ENST00000569337 HS6ST3Q8IZP7 471 aa10.03□□□□□ -0.8
UBR1-210ENST00000569337 PDCL2Q8N4E4 241 aa10.03□□□□□ -0.8
UBR1-210ENST00000569337 TOP6BLQ8N6T0 577 aa10.03□□□□□ -0.8
UBR1-210ENST00000569337 LEMD2Q8NC56 503 aa10.03□□□□□ -0.8
UBR1-210ENST00000569337 ANKRD20A12PQ8NF67 263 aa10.03□□□□□ -0.8
UBR1-210ENST00000569337 SPPL2BQ8TCT7 592 aa10.03□□□□□ -0.8
UBR1-210ENST00000569337 C2orf15Q8WU43 125 aaKnown RBP10.03□□□□□ -0.8
UBR1-210ENST00000569337 FGF14Q92915 247 aa10.03□□□□□ -0.8
UBR1-210ENST00000569337 TATDN2Q93075 761 aa10.03□□□□□ -0.8
UBR1-210ENST00000569337 TCEAL4Q96EI5 215 aa10.03□□□□□ -0.8
UBR1-210ENST00000569337 SEPT5Q99719 369 aaPredicted RBP10.03□□□□□ -0.8
UBR1-210ENST00000569337 RTP3Q9BQQ7 232 aa10.03□□□□□ -0.8
UBR1-210ENST00000569337 CRISPLD1Q9H336 500 aa10.03□□□□□ -0.8
UBR1-210ENST00000569337 APOBEC3GQ9HC16 384 aaKnown RBP10.03□□□□□ -0.8
UBR1-210ENST00000569337 SIX2Q9NPC8 291 aa10.03□□□□□ -0.8
UBR1-210ENST00000569337 DDX43Q9NXZ2 648 aaKnown RBP10.03□□□□□ -0.8
UBR1-210ENST00000569337 HSFX1Q9UBD0 423 aa10.03□□□□□ -0.8
UBR1-210ENST00000569337 SIK3Q9Y2K2 1263 aa10.03□□□□□ -0.8
UBR1-210ENST00000569337 ARIH1Q9Y4X5 557 aaPredicted RBP10.03□□□□□ -0.8
UBR1-210ENST00000569337 ASB3Q9Y575 518 aa10.03□□□□□ -0.8
UBR1-210ENST00000569337 GTPBP10A4D1E9 387 aaKnown RBP10.02□□□□□ -0.81
UBR1-210ENST00000569337 STK25O00506 426 aa10.02□□□□□ -0.81
UBR1-210ENST00000569337 PES1O00541 588 aaKnown RBP10.02□□□□□ -0.81
UBR1-210ENST00000569337 EPHB6O15197 1021 aa10.02□□□□□ -0.81
UBR1-210ENST00000569337 P4HA2O15460 535 aa10.02□□□□□ -0.81
UBR1-210ENST00000569337 PHACTR2O75167 634 aa10.02□□□□□ -0.81
UBR1-210ENST00000569337 SOAT2O75908 522 aa10.02□□□□□ -0.81
UBR1-210ENST00000569337 NOL4O94818 638 aa10.02□□□□□ -0.81
UBR1-210ENST00000569337 CEBPBP17676 345 aa10.02□□□□□ -0.81
UBR1-210ENST00000569337 PCSK1P29120 753 aa10.02□□□□□ -0.81
UBR1-210ENST00000569337 AVPR2P30518 371 aa10.02□□□□□ -0.81
UBR1-210ENST00000569337 CCR2P41597 374 aa10.02□□□□□ -0.81
UBR1-210ENST00000569337 ZNF75DP51815 510 aa10.02□□□□□ -0.81
UBR1-210ENST00000569337 TRPC3Q13507 836 aa10.02□□□□□ -0.81
UBR1-210ENST00000569337 VEPH1Q14D04 833 aa10.02□□□□□ -0.81
UBR1-210ENST00000569337 SYCP1Q15431 976 aa10.02□□□□□ -0.81
UBR1-210ENST00000569337 TAF12Q16514 161 aa10.02□□□□□ -0.81
UBR1-210ENST00000569337 NFE2Q16621 373 aaPredicted RBP10.02□□□□□ -0.81
UBR1-210ENST00000569337 SOWAHAQ2M3V2 549 aa10.02□□□□□ -0.81
UBR1-210ENST00000569337 PRSS36Q5K4E3 855 aa10.02□□□□□ -0.81
UBR1-210ENST00000569337 GJB7Q6PEY0 223 aa10.02□□□□□ -0.81
UBR1-210ENST00000569337 TRIM65Q6PJ69 517 aa10.02□□□□□ -0.81
UBR1-210ENST00000569337 GBP6Q6ZN66 633 aa10.02□□□□□ -0.81
UBR1-210ENST00000569337 ITIH5Q86UX2 942 aa10.02□□□□□ -0.81
UBR1-210ENST00000569337 ADGRF2Q8IZF7 708 aa10.02□□□□□ -0.81
UBR1-210ENST00000569337 SIX5Q8N196 739 aa10.02□□□□□ -0.81
UBR1-210ENST00000569337 TTC9BQ8N6N2 239 aa10.02□□□□□ -0.81
UBR1-210ENST00000569337 EHBP1Q8NDI1 1231 aa10.02□□□□□ -0.81
UBR1-210ENST00000569337 FBXL13Q8NEE6 735 aa10.02□□□□□ -0.81
UBR1-210ENST00000569337 FLCNQ8NFG4 579 aa10.02□□□□□ -0.81
UBR1-210ENST00000569337 SPATA18Q8TC71 538 aa10.02□□□□□ -0.81
UBR1-210ENST00000569337 ERGIC2Q96RQ1 377 aa10.02□□□□□ -0.81
UBR1-210ENST00000569337 MMS19Q96T76 1030 aa10.02□□□□□ -0.81
UBR1-210ENST00000569337 ACBD6Q9BR61 282 aa10.02□□□□□ -0.81
UBR1-210ENST00000569337 RPP25Q9BUL9 199 aaKnown RBP10.02□□□□□ -0.81
UBR1-210ENST00000569337 TRIM5Q9C035 493 aa10.02□□□□□ -0.81
UBR1-210ENST00000569337 INTS2Q9H0H0 1204 aaKnown RBP10.02□□□□□ -0.81
UBR1-210ENST00000569337 KCNH6Q9H252 994 aa10.02□□□□□ -0.81
UBR1-210ENST00000569337 RAB20Q9NX57 234 aa10.02□□□□□ -0.81
UBR1-210ENST00000569337 ABI2Q9NYB9 513 aaPredicted RBP10.02□□□□□ -0.81
UBR1-210ENST00000569337 GCNT4Q9P109 453 aa10.02□□□□□ -0.81
UBR1-210ENST00000569337 WNT16Q9UBV4 365 aa10.02□□□□□ -0.81
UBR1-210ENST00000569337 AJAP1Q9UKB5 411 aaPredicted RBP10.02□□□□□ -0.81
UBR1-210ENST00000569337 PCDHB5Q9Y5E4 795 aa10.02□□□□□ -0.81
UBR1-210ENST00000569337 GABRDO14764 452 aa10.01□□□□□ -0.81
UBR1-210ENST00000569337 ASS1P00966 412 aaKnown RBP10.01□□□□□ -0.81
UBR1-210ENST00000569337 HAPLN1P10915 354 aaPredicted RBP10.01□□□□□ -0.81
UBR1-210ENST00000569337 GJA1P17302 382 aa10.01□□□□□ -0.81
UBR1-210ENST00000569337 RFX1P22670 979 aa10.01□□□□□ -0.81
UBR1-210ENST00000569337 ACAT1P24752 427 aaKnown RBP10.01□□□□□ -0.81
UBR1-210ENST00000569337 PIK3CAP42336 1068 aa10.01□□□□□ -0.81
Retrieved 100 of 20,778 RNA–protein pairs in 44.9 ms