RNA–Protein interactions for RNA: ENST00000569263.1

CNOT1-217, Transcript of CCR4-NOT transcription complex subunit 1, humanhuman

TSL 2

Gene CNOT1, Length 304 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CNOT1-217ENST00000569263 KREMEN1Q96MU8 473 aa13.89□□□□□ -0.19
CNOT1-217ENST00000569263 LPIN3Q9BQK8 851 aa13.89□□□□□ -0.19
CNOT1-217ENST00000569263 CRISPLD1Q9H336 500 aa13.89□□□□□ -0.19
CNOT1-217ENST00000569263 FAM207AQ9NSI2 230 aaPredicted RBP13.89□□□□□ -0.19
CNOT1-217ENST00000569263 FAM49BQ9NUQ9 324 aa13.89□□□□□ -0.19
CNOT1-217ENST00000569263 HSFX1Q9UBD0 423 aa13.89□□□□□ -0.19
CNOT1-217ENST00000569263 DNAJC12Q9UKB3 198 aa13.89□□□□□ -0.19
CNOT1-217ENST00000569263 TEX33O43247 280 aa13.88□□□□□ -0.19
CNOT1-217ENST00000569263 TPM3P06753 285 aa13.88□□□□□ -0.19
CNOT1-217ENST00000569263 HAPLN1P10915 354 aaPredicted RBP13.88□□□□□ -0.19
CNOT1-217ENST00000569263 CCDC130P13994 396 aa13.88□□□□□ -0.19
CNOT1-217ENST00000569263 CD19P15391 556 aa13.88□□□□□ -0.19
CNOT1-217ENST00000569263 ACO1P21399 889 aaKnown RBP13.88□□□□□ -0.19
CNOT1-217ENST00000569263 BDNFP23560 247 aa13.88□□□□□ -0.19
CNOT1-217ENST00000569263 USP8P40818 1118 aa13.88□□□□□ -0.19
CNOT1-217ENST00000569263 KLK7P49862 253 aa13.88□□□□□ -0.19
CNOT1-217ENST00000569263 RAD23BP54727 409 aa13.88□□□□□ -0.19
CNOT1-217ENST00000569263 EPHB3P54753 998 aa13.88□□□□□ -0.19
CNOT1-217ENST00000569263 UBASH3AP57075 661 aa13.88□□□□□ -0.19
CNOT1-217ENST00000569263 RPL10AP62906 217 aaKnown RBP13.88□□□□□ -0.19
CNOT1-217ENST00000569263 SMAD4Q13485 552 aaKnown RBP13.88□□□□□ -0.19
CNOT1-217ENST00000569263 VEPH1Q14D04 833 aa13.88□□□□□ -0.19
CNOT1-217ENST00000569263 LEXMQ3ZCV2 418 aa13.88□□□□□ -0.19
CNOT1-217ENST00000569263 CFAP221Q4G0U5 840 aa13.88□□□□□ -0.19
CNOT1-217ENST00000569263 KLHDC7AQ5VTJ3 777 aa13.88□□□□□ -0.19
CNOT1-217ENST00000569263 FAM35AQ86V20 835 aa13.88□□□□□ -0.19
CNOT1-217ENST00000569263 SCN4BQ8IWT1 228 aa13.88□□□□□ -0.19
CNOT1-217ENST00000569263 SLC4A11Q8NBS3 891 aa13.88□□□□□ -0.19
CNOT1-217ENST00000569263 RBBP8NLQ8NC74 664 aaPredicted RBP13.88□□□□□ -0.19
CNOT1-217ENST00000569263 SMRP1Q8NCR6 262 aa13.88□□□□□ -0.19
CNOT1-217ENST00000569263 RIPOR3Q96MK2 946 aa13.88□□□□□ -0.19
CNOT1-217ENST00000569263 ERGIC2Q96RQ1 377 aa13.88□□□□□ -0.19
CNOT1-217ENST00000569263 RHOBTB2Q9BYZ6 727 aa13.88□□□□□ -0.19
CNOT1-217ENST00000569263 PRKD2Q9BZL6 878 aa13.88□□□□□ -0.19
CNOT1-217ENST00000569263 ZNF518BQ9C0D4 1074 aa13.88□□□□□ -0.19
CNOT1-217ENST00000569263 PLCB1Q9NQ66 1216 aa13.88□□□□□ -0.19
CNOT1-217ENST00000569263 KRT82Q9NSB4 513 aa13.88□□□□□ -0.19
CNOT1-217ENST00000569263 FAM50BQ9Y247 325 aa13.88□□□□□ -0.19
CNOT1-217ENST00000569263 SIK3Q9Y2K2 1263 aa13.88□□□□□ -0.19
CNOT1-217ENST00000569263 BRWD1Q9NSI6 2320 aa13.88□□□□□ -0.19
CNOT1-217ENST00000569263 DENND4AQ7Z401 1863 aa13.87□□□□□ -0.19
CNOT1-217ENST00000569263 CLDN5O00501 218 aa13.87□□□□□ -0.19
CNOT1-217ENST00000569263 SOAT2O75908 522 aa13.87□□□□□ -0.19
CNOT1-217ENST00000569263 PAEPP09466 180 aa13.87□□□□□ -0.19
CNOT1-217ENST00000569263 UCHL3P15374 230 aa13.87□□□□□ -0.19
CNOT1-217ENST00000569263 CYP2F1P24903 491 aa13.87□□□□□ -0.19
CNOT1-217ENST00000569263 ANXA13P27216 316 aa13.87□□□□□ -0.19
CNOT1-217ENST00000569263 ADORA2BP29275 332 aa13.87□□□□□ -0.19
CNOT1-217ENST00000569263 GRIK1P39086 918 aa13.87□□□□□ -0.19
CNOT1-217ENST00000569263 MTHFRP42898 656 aa13.87□□□□□ -0.19
CNOT1-217ENST00000569263 MAGEA11P43364 429 aa13.87□□□□□ -0.19
CNOT1-217ENST00000569263 TFF2Q03403 129 aa13.87□□□□□ -0.19
CNOT1-217ENST00000569263 TAF12Q16514 161 aa13.87□□□□□ -0.19
CNOT1-217ENST00000569263 PUS10Q3MIT2 529 aaKnown RBP13.87□□□□□ -0.19
CNOT1-217ENST00000569263 SGO2Q562F6 1265 aa13.87□□□□□ -0.19
CNOT1-217ENST00000569263 IQCEQ6IPM2 695 aa13.87□□□□□ -0.19
CNOT1-217ENST00000569263 VSTM1Q6UX27 236 aa13.87□□□□□ -0.19
CNOT1-217ENST00000569263 CYP26C1Q6V0L0 522 aa13.87□□□□□ -0.19
CNOT1-217ENST00000569263 GPR149Q86SP6 731 aa13.87□□□□□ -0.19
CNOT1-217ENST00000569263 C12orf29Q8N999 325 aa13.87□□□□□ -0.19
CNOT1-217ENST00000569263 SLC2A14Q8TDB8 520 aa13.87□□□□□ -0.19
CNOT1-217ENST00000569263 CYFIP2Q96F07 1278 aa13.87□□□□□ -0.19
CNOT1-217ENST00000569263 SMARCD1Q96GM5 515 aa13.87□□□□□ -0.19
CNOT1-217ENST00000569263 NAP1L5Q96NT1 182 aaPredicted RBP13.87□□□□□ -0.19
CNOT1-217ENST00000569263 B3GNT5Q9BYG0 378 aa13.87□□□□□ -0.19
CNOT1-217ENST00000569263 ADAM7Q9H2U9 754 aa13.87□□□□□ -0.19
CNOT1-217ENST00000569263 IFNKQ9P0W0 207 aa13.87□□□□□ -0.19
CNOT1-217ENST00000569263 DAAM1Q9Y4D1 1078 aa13.87□□□□□ -0.19
CNOT1-217ENST00000569263 FHOD1Q9Y613 1164 aa13.87□□□□□ -0.19
CNOT1-217ENST00000569263 PATJQ8NI35 1801 aa13.87□□□□□ -0.19
CNOT1-217ENST00000569263 TRIM66O15016 1216 aa13.86□□□□□ -0.19
CNOT1-217ENST00000569263 CBFA2T2O43439 604 aa13.86□□□□□ -0.19
CNOT1-217ENST00000569263 MBTPS2O43462 519 aa13.86□□□□□ -0.19
CNOT1-217ENST00000569263 POU2F2P09086 479 aa13.86□□□□□ -0.19
CNOT1-217ENST00000569263 ATF6P18850 670 aa13.86□□□□□ -0.19
CNOT1-217ENST00000569263 POLR2FP61218 127 aaKnown RBP13.86□□□□□ -0.19
CNOT1-217ENST00000569263 PLCB2Q00722 1185 aa13.86□□□□□ -0.19
CNOT1-217ENST00000569263 ATAT1Q5SQI0 421 aa13.86□□□□□ -0.19
CNOT1-217ENST00000569263 PTCRAQ6ISU1 281 aaPredicted RBP13.86□□□□□ -0.19
CNOT1-217ENST00000569263 ITIH5Q86UX2 942 aa13.86□□□□□ -0.19
CNOT1-217ENST00000569263 FUKQ8N0W3 1084 aa13.86□□□□□ -0.19
CNOT1-217ENST00000569263 SHC3Q92529 594 aa13.86□□□□□ -0.19
CNOT1-217ENST00000569263 ZNF707Q96C28 371 aaPredicted RBP13.86□□□□□ -0.19
CNOT1-217ENST00000569263 ZNF512Q96ME7 567 aaPredicted RBP13.86□□□□□ -0.19
CNOT1-217ENST00000569263 SPAG5Q96R06 1193 aa13.86□□□□□ -0.19
CNOT1-217ENST00000569263 S1PR5Q9H228 398 aa13.86□□□□□ -0.19
CNOT1-217ENST00000569263 GANQ9H2C0 597 aa13.86□□□□□ -0.19
CNOT1-217ENST00000569263 AJAP1Q9UKB5 411 aaPredicted RBP13.86□□□□□ -0.19
CNOT1-217ENST00000569263 USP15Q9Y4E8 981 aaPredicted RBP13.86□□□□□ -0.19
CNOT1-217ENST00000569263 MYO16Q9Y6X6 1858 aa13.85□□□□□ -0.19
CNOT1-217ENST00000569263 A0A1W2PQC6 194 aa13.85□□□□□ -0.19
CNOT1-217ENST00000569263 F8VP50 259 aa13.85□□□□□ -0.19
CNOT1-217ENST00000569263 AP1G2O75843 785 aa13.85□□□□□ -0.19
CNOT1-217ENST00000569263 FAM200BP0CF97 657 aa13.85□□□□□ -0.19
CNOT1-217ENST00000569263 VDRP11473 427 aa13.85□□□□□ -0.19
CNOT1-217ENST00000569263 PTPN2P17706 415 aa13.85□□□□□ -0.19
CNOT1-217ENST00000569263 GPR15P49685 360 aa13.85□□□□□ -0.19
CNOT1-217ENST00000569263 ZNF132P52740 706 aa13.85□□□□□ -0.19
CNOT1-217ENST00000569263 MRPS5P82675 430 aaKnown RBP13.85□□□□□ -0.19
CNOT1-217ENST00000569263 DRAP1Q14919 205 aaPredicted RBP13.85□□□□□ -0.19
Retrieved 100 of 20,778 RNA–protein pairs in 54.1 ms