RNA–Protein interactions for RNA: ENST00000569066.2

UBR1-208, Transcript of ubiquitin protein ligase E3 component n-recognin 1, humanhuman

TSL 1 (best)

Gene UBR1, Length 2,250 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBR1-208ENST00000569066 ZNF808Q8N4W9 903 aaPredicted RBP6.76□□□□□ -1.33
UBR1-208ENST00000569066 BHLHE22Q8NFJ8 381 aaPredicted RBP6.76□□□□□ -1.33
UBR1-208ENST00000569066 UBXN10Q96LJ8 280 aa6.76□□□□□ -1.33
UBR1-208ENST00000569066 PRPF18Q99633 342 aaKnown RBP6.76□□□□□ -1.33
UBR1-208ENST00000569066 XPNPEP3Q9NQH7 507 aa6.76□□□□□ -1.33
UBR1-208ENST00000569066 GGA3Q9NZ52 723 aa6.76□□□□□ -1.33
UBR1-208ENST00000569066 LPAR3Q9UBY5 353 aa6.76□□□□□ -1.33
UBR1-208ENST00000569066 SLC30A1Q9Y6M5 507 aa6.76□□□□□ -1.33
UBR1-208ENST00000569066 CAPN14A8MX76 684 aa6.75□□□□□ -1.33
UBR1-208ENST00000569066 FCHO1O14526 889 aa6.75□□□□□ -1.33
UBR1-208ENST00000569066 TOR1BO14657 336 aa6.75□□□□□ -1.33
UBR1-208ENST00000569066 SRGAP2O75044 1071 aa6.75□□□□□ -1.33
UBR1-208ENST00000569066 WNT3P56703 355 aa6.75□□□□□ -1.33
UBR1-208ENST00000569066 ZNF844Q08AG5 666 aa6.75□□□□□ -1.33
UBR1-208ENST00000569066 MYO1EQ12965 1108 aa6.75□□□□□ -1.33
UBR1-208ENST00000569066 CD300EQ496F6 205 aaPredicted RBP6.75□□□□□ -1.33
UBR1-208ENST00000569066 PDCD4Q53EL6 469 aaKnown RBP6.75□□□□□ -1.33
UBR1-208ENST00000569066 PRR16Q569H4 304 aa6.75□□□□□ -1.33
UBR1-208ENST00000569066 VPS53Q5VIR6 699 aa6.75□□□□□ -1.33
UBR1-208ENST00000569066 MIEF2Q96C03 454 aa6.75□□□□□ -1.33
UBR1-208ENST00000569066 SRP68Q9UHB9 627 aaKnown RBP6.75□□□□□ -1.33
UBR1-208ENST00000569066 HPSEQ9Y251 543 aa6.75□□□□□ -1.33
UBR1-208ENST00000569066 RAD54BQ9Y620 910 aa6.75□□□□□ -1.33
UBR1-208ENST00000569066 HS3ST4Q9Y661 456 aa6.75□□□□□ -1.33
UBR1-208ENST00000569066 A0A1B0GTW7 788 aa6.75□□□□□ -1.33
UBR1-208ENST00000569066 CCDC195A0A1B0GUA6 201 aa6.75□□□□□ -1.33
UBR1-208ENST00000569066 TISP43B9A030 160 aa6.75□□□□□ -1.33
UBR1-208ENST00000569066 B9A039 149 aa6.75□□□□□ -1.33
UBR1-208ENST00000569066 PIAS2O75928 621 aa6.75□□□□□ -1.33
UBR1-208ENST00000569066 CKMT1AP12532 417 aa6.75□□□□□ -1.33
UBR1-208ENST00000569066 HSD3B1P14060 373 aa6.75□□□□□ -1.33
UBR1-208ENST00000569066 CFPP27918 469 aa6.75□□□□□ -1.33
UBR1-208ENST00000569066 PIGFQ07326 219 aa6.75□□□□□ -1.33
UBR1-208ENST00000569066 MANEALQ5VSG8 457 aa6.75□□□□□ -1.33
UBR1-208ENST00000569066 ZNF384Q8TF68 577 aa6.75□□□□□ -1.33
UBR1-208ENST00000569066 GBA2Q9HCG7 927 aaPredicted RBP6.75□□□□□ -1.33
UBR1-208ENST00000569066 A0A0B4J269 797 aa6.74□□□□□ -1.33
UBR1-208ENST00000569066 PCDH17O14917 1159 aa6.74□□□□□ -1.33
UBR1-208ENST00000569066 NCAM2O15394 837 aa6.74□□□□□ -1.33
UBR1-208ENST00000569066 PRICKLE3O43900 615 aaPredicted RBP6.74□□□□□ -1.33
UBR1-208ENST00000569066 ERBB2P04626 1255 aa6.74□□□□□ -1.33
UBR1-208ENST00000569066 HGFP14210 728 aa6.74□□□□□ -1.33
UBR1-208ENST00000569066 JUPP14923 745 aa6.74□□□□□ -1.33
UBR1-208ENST00000569066 BMP7P18075 431 aa6.74□□□□□ -1.33
UBR1-208ENST00000569066 KLRK1P26718 216 aa6.74□□□□□ -1.33
UBR1-208ENST00000569066 SP2Q02086 613 aa6.74□□□□□ -1.33
UBR1-208ENST00000569066 FOXO1Q12778 655 aa6.74□□□□□ -1.33
UBR1-208ENST00000569066 MAPKAPK3Q16644 382 aa6.74□□□□□ -1.33
UBR1-208ENST00000569066 ZNF750Q32MQ0 723 aa6.74□□□□□ -1.33
UBR1-208ENST00000569066 TMPRSS9Q7Z410 1059 aa6.74□□□□□ -1.33
UBR1-208ENST00000569066 SGMS1Q86VZ5 419 aa6.74□□□□□ -1.33
UBR1-208ENST00000569066 SP8Q8IXZ3 490 aa6.74□□□□□ -1.33
UBR1-208ENST00000569066 LRRC56Q8IYG6 542 aaPredicted RBP6.74□□□□□ -1.33
UBR1-208ENST00000569066 GALNT15Q8N3T1 639 aa6.74□□□□□ -1.33
UBR1-208ENST00000569066 Q8NA96 180 aa6.74□□□□□ -1.33
UBR1-208ENST00000569066 DNAJB14Q8TBM8 379 aa6.74□□□□□ -1.33
UBR1-208ENST00000569066 POC1BQ8TC44 478 aa6.74□□□□□ -1.33
UBR1-208ENST00000569066 MNTQ99583 582 aa6.74□□□□□ -1.33
UBR1-208ENST00000569066 FAM167BQ9BTA0 163 aa6.74□□□□□ -1.33
UBR1-208ENST00000569066 SLC46A2Q9BY10 475 aa6.74□□□□□ -1.33
UBR1-208ENST00000569066 NPEPPSL1A6NEC2 478 aa6.74□□□□□ -1.33
UBR1-208ENST00000569066 RRN3P2A6NIE6 340 aa6.74□□□□□ -1.33
UBR1-208ENST00000569066 ITGA5P08648 1049 aa6.74□□□□□ -1.33
UBR1-208ENST00000569066 ATXN1LP0C7T5 689 aaKnown RBP6.74□□□□□ -1.33
UBR1-208ENST00000569066 KCNA3P22001 575 aa6.74□□□□□ -1.33
UBR1-208ENST00000569066 CNTFP26441 200 aa6.74□□□□□ -1.33
UBR1-208ENST00000569066 PRKAA2P54646 552 aa6.74□□□□□ -1.33
UBR1-208ENST00000569066 LMOD3Q0VAK6 560 aa6.74□□□□□ -1.33
UBR1-208ENST00000569066 MGAT5BQ3V5L5 792 aa6.74□□□□□ -1.33
UBR1-208ENST00000569066 DCAF17Q5H9S7 520 aaPredicted RBP6.74□□□□□ -1.33
UBR1-208ENST00000569066 CCDC70Q6NSX1 233 aa6.74□□□□□ -1.33
UBR1-208ENST00000569066 C1QL4Q86Z23 238 aa6.74□□□□□ -1.33
UBR1-208ENST00000569066 PPP2R3CQ969Q6 453 aa6.74□□□□□ -1.33
UBR1-208ENST00000569066 PNKPQ96T60 521 aa6.74□□□□□ -1.33
UBR1-208ENST00000569066 MPHOSPH9Q99550 1183 aa6.74□□□□□ -1.33
UBR1-208ENST00000569066 GPR87Q9BY21 358 aa6.74□□□□□ -1.33
UBR1-208ENST00000569066 EIF2AQ9BY44 585 aaKnown RBP6.74□□□□□ -1.33
UBR1-208ENST00000569066 CHST2Q9Y4C5 530 aa6.74□□□□□ -1.33
UBR1-208ENST00000569066 OTOL1A6NHN0 477 aaPredicted RBP6.73□□□□□ -1.33
UBR1-208ENST00000569066 HMX3A6NHT5 357 aa6.73□□□□□ -1.33
UBR1-208ENST00000569066 AGPSO00116 658 aa6.73□□□□□ -1.33
UBR1-208ENST00000569066 CCP110O43303 1012 aa6.73□□□□□ -1.33
UBR1-208ENST00000569066 SCNN1GP51170 649 aa6.73□□□□□ -1.33
UBR1-208ENST00000569066 ARHGAP40Q5TG30 622 aa6.73□□□□□ -1.33
UBR1-208ENST00000569066 CYP26C1Q6V0L0 522 aa6.73□□□□□ -1.33
UBR1-208ENST00000569066 MMS22LQ6ZRQ5 1243 aa6.73□□□□□ -1.33
UBR1-208ENST00000569066 SCAMP5Q8TAC9 235 aa6.73□□□□□ -1.33
UBR1-208ENST00000569066 ZBTB45Q96K62 511 aaPredicted RBP6.73□□□□□ -1.33
UBR1-208ENST00000569066 MSL2Q9HCI7 577 aa6.73□□□□□ -1.33
UBR1-208ENST00000569066 DNPH1O43598 174 aa6.73□□□□□ -1.33
UBR1-208ENST00000569066 GPANK1O95872 356 aa6.73□□□□□ -1.33
UBR1-208ENST00000569066 CSF1RP07333 972 aa6.73□□□□□ -1.33
UBR1-208ENST00000569066 PDHA1P08559 390 aa6.73□□□□□ -1.33
UBR1-208ENST00000569066 CYP2C9P11712 490 aa6.73□□□□□ -1.33
UBR1-208ENST00000569066 ADORA2AP29274 412 aa6.73□□□□□ -1.33
UBR1-208ENST00000569066 PRKAG1P54619 331 aa6.73□□□□□ -1.33
UBR1-208ENST00000569066 FAM189BP81408 668 aa6.73□□□□□ -1.33
UBR1-208ENST00000569066 EEF1AKMT2Q5JPI9 291 aaKnown RBP6.73□□□□□ -1.33
UBR1-208ENST00000569066 FAXCQ5TGI0 409 aa6.73□□□□□ -1.33
UBR1-208ENST00000569066 RGS7BPQ6MZT1 257 aaPredicted RBP6.73□□□□□ -1.33
Retrieved 100 of 20,778 RNA–protein pairs in 31.7 ms