RNA–Protein interactions for RNA: ENST00000568569.1

GTF3C1-209, Transcript of general transcription factor IIIC subunit 1, humanhuman

TSL 5

Gene GTF3C1, Length 540 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GTF3C1-209ENST00000568569 EVLQ9UI08 416 aaPredicted RBP12.72□□□□□ -0.37
GTF3C1-209ENST00000568569 LIMCH1Q9UPQ0 1083 aa12.72□□□□□ -0.37
GTF3C1-209ENST00000568569 WNT6Q9Y6F9 365 aa12.72□□□□□ -0.37
GTF3C1-209ENST00000568569 ATG2BQ96BY7 2078 aa12.71□□□□□ -0.37
GTF3C1-209ENST00000568569 PATE3B3GLJ2 98 aa12.71□□□□□ -0.37
GTF3C1-209ENST00000568569 USP17L7P0C7H9 530 aa12.71□□□□□ -0.37
GTF3C1-209ENST00000568569 BCKDHBP21953 392 aa12.71□□□□□ -0.37
GTF3C1-209ENST00000568569 ABCD1P33897 745 aa12.71□□□□□ -0.37
GTF3C1-209ENST00000568569 DHPSP49366 369 aaPredicted RBP12.71□□□□□ -0.37
GTF3C1-209ENST00000568569 GPR15P49685 360 aa12.71□□□□□ -0.37
GTF3C1-209ENST00000568569 ACOT2P49753 483 aa12.71□□□□□ -0.37
GTF3C1-209ENST00000568569 RPL10AP62906 217 aaKnown RBP12.71□□□□□ -0.37
GTF3C1-209ENST00000568569 IRX4P78413 519 aa12.71□□□□□ -0.37
GTF3C1-209ENST00000568569 EML3Q32P44 896 aa12.71□□□□□ -0.37
GTF3C1-209ENST00000568569 UAP1L1Q3KQV9 507 aa12.71□□□□□ -0.37
GTF3C1-209ENST00000568569 SV2CQ496J9 727 aa12.71□□□□□ -0.37
GTF3C1-209ENST00000568569 ARSHQ5FYA8 562 aa12.71□□□□□ -0.37
GTF3C1-209ENST00000568569 SLC39A4Q6P5W5 647 aa12.71□□□□□ -0.37
GTF3C1-209ENST00000568569 DEFB124Q8NES8 71 aa12.71□□□□□ -0.37
GTF3C1-209ENST00000568569 USP33Q8TEY7 942 aa12.71□□□□□ -0.37
GTF3C1-209ENST00000568569 TRMT2BQ96GJ1 504 aaKnown RBP12.71□□□□□ -0.37
GTF3C1-209ENST00000568569 MYRFLQ96LU7 910 aa12.71□□□□□ -0.37
GTF3C1-209ENST00000568569 PLIN2Q99541 437 aa12.71□□□□□ -0.37
GTF3C1-209ENST00000568569 REEP2Q9BRK0 252 aa12.71□□□□□ -0.37
GTF3C1-209ENST00000568569 PI4K2AQ9BTU6 479 aa12.71□□□□□ -0.37
GTF3C1-209ENST00000568569 SLC32A1Q9H598 525 aa12.71□□□□□ -0.37
GTF3C1-209ENST00000568569 PARVGQ9HBI0 331 aa12.71□□□□□ -0.37
GTF3C1-209ENST00000568569 ABCB6Q9NP58 842 aa12.71□□□□□ -0.37
GTF3C1-209ENST00000568569 EIF4ENIF1Q9NRA8 985 aaKnown RBP12.71□□□□□ -0.37
GTF3C1-209ENST00000568569 DPP3Q9NY33 737 aa12.71□□□□□ -0.37
GTF3C1-209ENST00000568569 NEUROG3Q9Y4Z2 214 aa12.71□□□□□ -0.37
GTF3C1-209ENST00000568569 LOC400499M0QZD8 3231 aa12.71□□□□□ -0.38
GTF3C1-209ENST00000568569 DSPP15924 2871 aaKnown RBP12.71□□□□□ -0.38
GTF3C1-209ENST00000568569 TSC2P49815 1807 aa12.7□□□□□ -0.38
GTF3C1-209ENST00000568569 CACNA1EQ15878 2313 aa12.7□□□□□ -0.38
GTF3C1-209ENST00000568569 KPNA7A9QM74 516 aa12.7□□□□□ -0.38
GTF3C1-209ENST00000568569 TRAK2O60296 914 aa12.7□□□□□ -0.38
GTF3C1-209ENST00000568569 NOL4O94818 638 aa12.7□□□□□ -0.38
GTF3C1-209ENST00000568569 FAM13AO94988 1023 aa12.7□□□□□ -0.38
GTF3C1-209ENST00000568569 NFATC1O95644 943 aa12.7□□□□□ -0.38
GTF3C1-209ENST00000568569 ZNF131P52739 623 aa12.7□□□□□ -0.38
GTF3C1-209ENST00000568569 ATP2C1P98194 919 aaPredicted RBP12.7□□□□□ -0.38
GTF3C1-209ENST00000568569 DDR2Q16832 855 aa12.7□□□□□ -0.38
GTF3C1-209ENST00000568569 TMEM119Q4V9L6 283 aa12.7□□□□□ -0.38
GTF3C1-209ENST00000568569 SDHAF4Q5VUM1 108 aa12.7□□□□□ -0.38
GTF3C1-209ENST00000568569 KIAA1211LQ6NV74 962 aa12.7□□□□□ -0.38
GTF3C1-209ENST00000568569 EFCAB13Q8IY85 973 aa12.7□□□□□ -0.38
GTF3C1-209ENST00000568569 MYCT1Q8N699 235 aa12.7□□□□□ -0.38
GTF3C1-209ENST00000568569 FSIP1Q8NA03 581 aa12.7□□□□□ -0.38
GTF3C1-209ENST00000568569 MDGA1Q8NFP4 955 aa12.7□□□□□ -0.38
GTF3C1-209ENST00000568569 PIGKQ92643 395 aa12.7□□□□□ -0.38
GTF3C1-209ENST00000568569 SPACA7Q96KW9 195 aa12.7□□□□□ -0.38
GTF3C1-209ENST00000568569 ZNF560Q96MR9 790 aa12.7□□□□□ -0.38
GTF3C1-209ENST00000568569 NUSAP1Q9BXS6 441 aaKnown RBP12.7□□□□□ -0.38
GTF3C1-209ENST00000568569 TMLHEQ9NVH6 421 aa12.7□□□□□ -0.38
GTF3C1-209ENST00000568569 EML5Q05BV3 1969 aa12.7□□□□□ -0.38
GTF3C1-209ENST00000568569 LAMA5O15230 3695 aa12.69□□□□□ -0.38
GTF3C1-209ENST00000568569 AKAP13Q12802 2813 aa12.69□□□□□ -0.38
GTF3C1-209ENST00000568569 VWA3AA6NCI4 1184 aa12.69□□□□□ -0.38
GTF3C1-209ENST00000568569 HYAL3O43820 417 aaPredicted RBP12.69□□□□□ -0.38
GTF3C1-209ENST00000568569 ALDH1A2O94788 518 aa12.69□□□□□ -0.38
GTF3C1-209ENST00000568569 PNPLA4P41247 253 aa12.69□□□□□ -0.38
GTF3C1-209ENST00000568569 SEC13P55735 322 aa12.69□□□□□ -0.38
GTF3C1-209ENST00000568569 POU5F1Q01860 360 aaKnown RBP12.69□□□□□ -0.38
GTF3C1-209ENST00000568569 RING1Q06587 406 aa12.69□□□□□ -0.38
GTF3C1-209ENST00000568569 KCNB1Q14721 858 aa12.69□□□□□ -0.38
GTF3C1-209ENST00000568569 CRY1Q16526 586 aa12.69□□□□□ -0.38
GTF3C1-209ENST00000568569 C2orf27AQ580R0 203 aa12.69□□□□□ -0.38
GTF3C1-209ENST00000568569 TRIM61Q5EBN2 209 aa12.69□□□□□ -0.38
GTF3C1-209ENST00000568569 LMBRD2Q68DH5 695 aaPredicted RBP12.69□□□□□ -0.38
GTF3C1-209ENST00000568569 ADALQ6DHV7 355 aa12.69□□□□□ -0.38
GTF3C1-209ENST00000568569 SLFN12LQ6IEE8 588 aa12.69□□□□□ -0.38
GTF3C1-209ENST00000568569 LRSAM1Q6UWE0 723 aa12.69□□□□□ -0.38
GTF3C1-209ENST00000568569 LPCAT2Q7L5N7 544 aa12.69□□□□□ -0.38
GTF3C1-209ENST00000568569 GPBP1Q86WP2 473 aa12.69□□□□□ -0.38
GTF3C1-209ENST00000568569 ABCA7Q8IZY2 2146 aa12.69□□□□□ -0.38
GTF3C1-209ENST00000568569 PDCL2Q8N4E4 241 aa12.69□□□□□ -0.38
GTF3C1-209ENST00000568569 SH3RF2Q8TEC5 729 aa12.69□□□□□ -0.38
GTF3C1-209ENST00000568569 SLC22A12Q96S37 553 aa12.69□□□□□ -0.38
GTF3C1-209ENST00000568569 CYP2S1Q96SQ9 504 aa12.69□□□□□ -0.38
GTF3C1-209ENST00000568569 MMP17Q9ULZ9 603 aa12.69□□□□□ -0.38
GTF3C1-209ENST00000568569 ARHGAP26Q9UNA1 814 aa12.69□□□□□ -0.38
GTF3C1-209ENST00000568569 LHX6Q9UPM6 363 aa12.69□□□□□ -0.38
GTF3C1-209ENST00000568569 K7EQS6 105 aa12.68□□□□□ -0.38
GTF3C1-209ENST00000568569 TNFRSF10BO14763 440 aa12.68□□□□□ -0.38
GTF3C1-209ENST00000568569 SLC26A4O43511 780 aa12.68□□□□□ -0.38
GTF3C1-209ENST00000568569 TCF3P15923 654 aa12.68□□□□□ -0.38
GTF3C1-209ENST00000568569 CYP2F1P24903 491 aa12.68□□□□□ -0.38
GTF3C1-209ENST00000568569 MAPK8P45983 427 aa12.68□□□□□ -0.38
GTF3C1-209ENST00000568569 PDE6CP51160 858 aa12.68□□□□□ -0.38
GTF3C1-209ENST00000568569 GTF2BQ00403 316 aa12.68□□□□□ -0.38
GTF3C1-209ENST00000568569 RILPL1Q5EBL4 403 aa12.68□□□□□ -0.38
GTF3C1-209ENST00000568569 INTS6LQ5JSJ4 861 aaKnown RBP12.68□□□□□ -0.38
GTF3C1-209ENST00000568569 TTC30AQ86WT1 665 aa12.68□□□□□ -0.38
GTF3C1-209ENST00000568569 NT5DC4Q86YG4 428 aa12.68□□□□□ -0.38
GTF3C1-209ENST00000568569 SYT12Q8IV01 421 aa12.68□□□□□ -0.38
GTF3C1-209ENST00000568569 ARL14EPQ8N8R7 260 aaPredicted RBP12.68□□□□□ -0.38
GTF3C1-209ENST00000568569 OLIG1Q8TAK6 271 aa12.68□□□□□ -0.38
GTF3C1-209ENST00000568569 WHAMMQ8TF30 809 aa12.68□□□□□ -0.38
GTF3C1-209ENST00000568569 FIZ1Q96SL8 496 aa12.68□□□□□ -0.38
Retrieved 100 of 20,778 RNA–protein pairs in 42.7 ms