RNA–Protein interactions for RNA: ENST00000568158.1

CNOT1-213, Transcript of CCR4-NOT transcription complex subunit 1, humanhuman

TSL 3

Gene CNOT1, Length 496 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CNOT1-213ENST00000568158 B3GNT5Q9BYG0 378 aa13.87□□□□□ -0.19
CNOT1-213ENST00000568158 CYP3A43Q9HB55 503 aa13.87□□□□□ -0.19
CNOT1-213ENST00000568158 SAMSN1Q9NSI8 373 aaKnown RBP13.87□□□□□ -0.19
CNOT1-213ENST00000568158 FAM120AQ9NZB2 1118 aaKnown RBP eCLIP13.87□□□□□ -0.192e-12■□□□□ 9.9
CNOT1-213ENST00000568158 HMGXB4Q9UGU5 601 aa13.87□□□□□ -0.19
CNOT1-213ENST00000568158 MUTYHQ9UIF7 546 aa13.87□□□□□ -0.19
CNOT1-213ENST00000568158 UTP18Q9Y5J1 556 aaKnown RBP eCLIP13.87□□□□□ -0.19
CNOT1-213ENST00000568158 VCANP13611 3396 aa13.87□□□□□ -0.19
CNOT1-213ENST00000568158 ZNF197O14709 1029 aa13.86□□□□□ -0.19
CNOT1-213ENST00000568158 CEBPBP17676 345 aa13.86□□□□□ -0.19
CNOT1-213ENST00000568158 MAPRE1Q15691 268 aaKnown RBP13.86□□□□□ -0.19
CNOT1-213ENST00000568158 C4orf50Q6ZRC1 276 aa13.86□□□□□ -0.19
CNOT1-213ENST00000568158 C11orf57Q6ZUT1 292 aaPredicted RBP13.86□□□□□ -0.19
CNOT1-213ENST00000568158 PAQR9Q6ZVX9 377 aa13.86□□□□□ -0.19
CNOT1-213ENST00000568158 PDZD4Q76G19 769 aaPredicted RBP13.86□□□□□ -0.19
CNOT1-213ENST00000568158 TMC8Q8IU68 726 aa13.86□□□□□ -0.19
CNOT1-213ENST00000568158 CRYBG2Q8N1P7 616 aa13.86□□□□□ -0.19
CNOT1-213ENST00000568158 B3GALNT2Q8NCR0 500 aa13.86□□□□□ -0.19
CNOT1-213ENST00000568158 EHBP1Q8NDI1 1231 aa13.86□□□□□ -0.19
CNOT1-213ENST00000568158 LMO3Q8TAP4 145 aa13.86□□□□□ -0.19
CNOT1-213ENST00000568158 WHAMMQ8TF30 809 aa13.86□□□□□ -0.19
CNOT1-213ENST00000568158 PSMG2Q969U7 264 aa13.86□□□□□ -0.19
CNOT1-213ENST00000568158 TWNKQ96RR1 684 aa13.86□□□□□ -0.19
CNOT1-213ENST00000568158 NIF3L1Q9GZT8 377 aa13.86□□□□□ -0.19
CNOT1-213ENST00000568158 AVENQ9NQS1 362 aaPredicted RBP13.86□□□□□ -0.19
CNOT1-213ENST00000568158 CDH7Q9ULB5 785 aa13.86□□□□□ -0.19
CNOT1-213ENST00000568158 ASB3Q9Y575 518 aa13.86□□□□□ -0.19
CNOT1-213ENST00000568158 SLC38A8A6NNN8 435 aa13.85□□□□□ -0.19
CNOT1-213ENST00000568158 PMM2O15305 246 aa13.85□□□□□ -0.19
CNOT1-213ENST00000568158 AFPP02771 609 aaKnown RBP13.85□□□□□ -0.19
CNOT1-213ENST00000568158 GRIK1P39086 918 aa13.85□□□□□ -0.19
CNOT1-213ENST00000568158 MTIF2P46199 727 aaKnown RBP13.85□□□□□ -0.19
CNOT1-213ENST00000568158 CACNA2D1P54289 1103 aa13.85□□□□□ -0.19
CNOT1-213ENST00000568158 EPHA5P54756 1037 aa13.85□□□□□ -0.19
CNOT1-213ENST00000568158 RPL10AP62906 217 aaKnown RBP13.85□□□□□ -0.19
CNOT1-213ENST00000568158 VEPH1Q14D04 833 aa13.85□□□□□ -0.19
CNOT1-213ENST00000568158 TAF12Q16514 161 aa13.85□□□□□ -0.19
CNOT1-213ENST00000568158 CFAP221Q4G0U5 840 aa13.85□□□□□ -0.19
CNOT1-213ENST00000568158 ZNF394Q53GI3 561 aa13.85□□□□□ -0.19
CNOT1-213ENST00000568158 CT47A1Q5JQC4 288 aaPredicted RBP13.85□□□□□ -0.19
CNOT1-213ENST00000568158 ITIH5Q86UX2 942 aa13.85□□□□□ -0.19
CNOT1-213ENST00000568158 UNC93AQ86WB7 457 aa13.85□□□□□ -0.19
CNOT1-213ENST00000568158 GPIHBP1Q8IV16 184 aa13.85□□□□□ -0.19
CNOT1-213ENST00000568158 C12orf29Q8N999 325 aa13.85□□□□□ -0.19
CNOT1-213ENST00000568158 FUBP3Q96I24 572 aaKnown RBP eCLIP13.85□□□□□ -0.19
CNOT1-213ENST00000568158 ZSWIM3Q96MP5 696 aa13.85□□□□□ -0.19
CNOT1-213ENST00000568158 ARID3AQ99856 593 aa13.85□□□□□ -0.19
CNOT1-213ENST00000568158 MED10Q9BTT4 135 aa13.85□□□□□ -0.19
CNOT1-213ENST00000568158 RPP25Q9BUL9 199 aaKnown RBP13.85□□□□□ -0.19
CNOT1-213ENST00000568158 ZNF518BQ9C0D4 1074 aa13.85□□□□□ -0.19
CNOT1-213ENST00000568158 ELOVL4Q9GZR5 314 aa13.85□□□□□ -0.19
CNOT1-213ENST00000568158 THAP9Q9H5L6 903 aa13.85□□□□□ -0.19
CNOT1-213ENST00000568158 KCNK12Q9HB15 430 aa13.85□□□□□ -0.19
CNOT1-213ENST00000568158 ABCB6Q9NP58 842 aa13.85□□□□□ -0.19
CNOT1-213ENST00000568158 ASAH2Q9NR71 780 aa13.85□□□□□ -0.19
CNOT1-213ENST00000568158 ANO10Q9NW15 660 aa13.85□□□□□ -0.19
CNOT1-213ENST00000568158 EPS15L1Q9UBC2 864 aa13.85□□□□□ -0.19
CNOT1-213ENST00000568158 MAGED2Q9UNF1 606 aaPredicted RBP13.85□□□□□ -0.19
CNOT1-213ENST00000568158 NCOR1O75376 2440 aa13.85□□□□□ -0.19
CNOT1-213ENST00000568158 A0A1W2PRU2 124 aa13.84□□□□□ -0.19
CNOT1-213ENST00000568158 PI4K2BG5E9Z4 385 aa13.84□□□□□ -0.19
CNOT1-213ENST00000568158 P4HA2O15460 535 aa13.84□□□□□ -0.19
CNOT1-213ENST00000568158 CILPO75339 1184 aa13.84□□□□□ -0.19
CNOT1-213ENST00000568158 HMGA1P17096 107 aaKnown RBP13.84□□□□□ -0.19
CNOT1-213ENST00000568158 GABRR2P28476 465 aa13.84□□□□□ -0.19
CNOT1-213ENST00000568158 MAGEA11P43364 429 aa13.84□□□□□ -0.19
CNOT1-213ENST00000568158 INCA1Q0VD86 236 aa13.84□□□□□ -0.19
CNOT1-213ENST00000568158 TEAD2Q15562 447 aa13.84□□□□□ -0.19
CNOT1-213ENST00000568158 PARM1Q6UWI2 310 aa13.84□□□□□ -0.19
CNOT1-213ENST00000568158 GAREM2Q75VX8 874 aa13.84□□□□□ -0.19
CNOT1-213ENST00000568158 NPAS3Q8IXF0 933 aa13.84□□□□□ -0.19
CNOT1-213ENST00000568158 SHKBP1Q8TBC3 707 aa13.84□□□□□ -0.19
CNOT1-213ENST00000568158 ENOX1Q8TC92 643 aaKnown RBP13.84□□□□□ -0.19
CNOT1-213ENST00000568158 TNIP3Q96KP6 325 aa13.84□□□□□ -0.19
CNOT1-213ENST00000568158 NT5C1AQ9BXI3 368 aa13.84□□□□□ -0.19
CNOT1-213ENST00000568158 ATXN3LQ9H3M9 355 aa13.84□□□□□ -0.19
CNOT1-213ENST00000568158 SMOC2Q9H3U7 446 aa13.84□□□□□ -0.19
CNOT1-213ENST00000568158 IL21Q9HBE4 155 aa13.84□□□□□ -0.19
CNOT1-213ENST00000568158 CISHQ9NSE2 258 aa13.84□□□□□ -0.19
CNOT1-213ENST00000568158 TMEM30AQ9NV96 361 aa13.84□□□□□ -0.19
CNOT1-213ENST00000568158 SSUH2Q9Y2M2 353 aa13.84□□□□□ -0.19
CNOT1-213ENST00000568158 TTC28Q96AY4 2481 aa13.83□□□□□ -0.2
CNOT1-213ENST00000568158 F8VP50 259 aa13.83□□□□□ -0.2
CNOT1-213ENST00000568158 DCXO43602 365 aa13.83□□□□□ -0.2
CNOT1-213ENST00000568158 F11P03951 625 aa13.83□□□□□ -0.2
CNOT1-213ENST00000568158 CSH1P0DML2 217 aa13.83□□□□□ -0.2
CNOT1-213ENST00000568158 CSH2P0DML3 217 aa13.83□□□□□ -0.2
CNOT1-213ENST00000568158 CCDC130P13994 396 aa13.83□□□□□ -0.2
CNOT1-213ENST00000568158 SLC9A1P19634 815 aa13.83□□□□□ -0.2
CNOT1-213ENST00000568158 TYRO3Q06418 890 aa13.83□□□□□ -0.2
CNOT1-213ENST00000568158 CETN1Q12798 172 aa13.83□□□□□ -0.2
CNOT1-213ENST00000568158 CUL2Q13617 745 aa13.83□□□□□ -0.2
CNOT1-213ENST00000568158 STX1AQ16623 288 aa13.83□□□□□ -0.2
CNOT1-213ENST00000568158 PTPN21Q16825 1174 aa13.83□□□□□ -0.2
CNOT1-213ENST00000568158 STXBP5Q5T5C0 1151 aa13.83□□□□□ -0.2
CNOT1-213ENST00000568158 VSTM1Q6UX27 236 aa13.83□□□□□ -0.2
CNOT1-213ENST00000568158 RRAGAQ7L523 313 aa13.83□□□□□ -0.2
CNOT1-213ENST00000568158 ARHGEF19Q8IW93 802 aa13.83□□□□□ -0.2
CNOT1-213ENST00000568158 FUKQ8N0W3 1084 aa13.83□□□□□ -0.2
CNOT1-213ENST00000568158 SLC44A3Q8N4M1 653 aa13.83□□□□□ -0.2
Retrieved 100 of 20,778 RNA–protein pairs in 35.7 ms