RNA–Protein interactions for RNA: ENST00000567071.5

CAPN3-216, Transcript of calpain 3, humanhuman

TSL 4

Gene CAPN3, Length 563 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAPN3-216ENST00000567071 INAVAQ3KP66 663 aa10.56□□□□□ -0.72
CAPN3-216ENST00000567071 NOSTRINQ8IVI9 506 aa10.56□□□□□ -0.72
CAPN3-216ENST00000567071 ZBTB8OSQ8IWT0 167 aa10.56□□□□□ -0.72
CAPN3-216ENST00000567071 ALLCQ8N6M5 410 aa10.56□□□□□ -0.72
CAPN3-216ENST00000567071 MAB21L3Q8N8X9 362 aa10.56□□□□□ -0.72
CAPN3-216ENST00000567071 ZNF248Q8NDW4 579 aa10.56□□□□□ -0.72
CAPN3-216ENST00000567071 BEST2Q8NFU1 509 aa10.56□□□□□ -0.72
CAPN3-216ENST00000567071 OSCP1Q8WVF1 389 aa10.56□□□□□ -0.72
CAPN3-216ENST00000567071 USP13Q92995 863 aaPredicted RBP10.56□□□□□ -0.72
CAPN3-216ENST00000567071 GJA10Q969M2 543 aa10.56□□□□□ -0.72
CAPN3-216ENST00000567071 FAM212AQ96EL1 285 aa10.56□□□□□ -0.72
CAPN3-216ENST00000567071 SUSD3Q96L08 255 aa10.56□□□□□ -0.72
CAPN3-216ENST00000567071 SLC46A2Q9BY10 475 aa10.56□□□□□ -0.72
CAPN3-216ENST00000567071 SLKQ9H2G2 1235 aaPredicted RBP10.56□□□□□ -0.72
CAPN3-216ENST00000567071 WDR3Q9UNX4 943 aaKnown RBP eCLIP10.56□□□□□ -0.72
CAPN3-216ENST00000567071 CCL26Q9Y258 94 aa10.56□□□□□ -0.72
CAPN3-216ENST00000567071 KNL1Q8NG31 2342 aa10.55□□□□□ -0.72
CAPN3-216ENST00000567071 KLF18A0A0U1RQI7 1052 aa10.55□□□□□ -0.72
CAPN3-216ENST00000567071 LRRIQ4A6NIV6 560 aa10.55□□□□□ -0.72
CAPN3-216ENST00000567071 NFATC1O95644 943 aa10.55□□□□□ -0.72
CAPN3-216ENST00000567071 TIE1P35590 1138 aa10.55□□□□□ -0.72
CAPN3-216ENST00000567071 GRK6P43250 576 aa10.55□□□□□ -0.72
CAPN3-216ENST00000567071 YARSP54577 528 aaKnown RBP10.55□□□□□ -0.72
CAPN3-216ENST00000567071 YWHAHQ04917 246 aaPredicted RBP10.55□□□□□ -0.72
CAPN3-216ENST00000567071 NFATC3Q12968 1075 aa10.55□□□□□ -0.72
CAPN3-216ENST00000567071 STK3Q13188 491 aa10.55□□□□□ -0.72
CAPN3-216ENST00000567071 ANKRD1Q15327 319 aa10.55□□□□□ -0.72
CAPN3-216ENST00000567071 DCAF4L1Q3SXM0 396 aa10.55□□□□□ -0.72
CAPN3-216ENST00000567071 USP37Q86T82 979 aa10.55□□□□□ -0.72
CAPN3-216ENST00000567071 SLC41A1Q8IVJ1 513 aa10.55□□□□□ -0.72
CAPN3-216ENST00000567071 IL17RCQ8NAC3 791 aa10.55□□□□□ -0.72
CAPN3-216ENST00000567071 ASAP3Q8TDY4 903 aa10.55□□□□□ -0.72
CAPN3-216ENST00000567071 DDX12PQ92771 950 aa10.55□□□□□ -0.72
CAPN3-216ENST00000567071 AGXT2Q9BYV1 514 aa10.55□□□□□ -0.72
CAPN3-216ENST00000567071 ZMYND12Q9H0C1 365 aa10.55□□□□□ -0.72
CAPN3-216ENST00000567071 PDZD7Q9H5P4 517 aa10.55□□□□□ -0.72
CAPN3-216ENST00000567071 TOPORSQ9NS56 1045 aaPredicted RBP10.55□□□□□ -0.72
CAPN3-216ENST00000567071 LIMCH1Q9UPQ0 1083 aa10.55□□□□□ -0.72
CAPN3-216ENST00000567071 OR6C75A6NL08 312 aa10.54□□□□□ -0.72
CAPN3-216ENST00000567071 GOLGA8BA8MQT2 603 aa10.54□□□□□ -0.72
CAPN3-216ENST00000567071 MEI4A8MW99 385 aa10.54□□□□□ -0.72
CAPN3-216ENST00000567071 SGK1O00141 431 aa10.54□□□□□ -0.72
CAPN3-216ENST00000567071 TERTO14746 1132 aaKnown RBP10.54□□□□□ -0.72
CAPN3-216ENST00000567071 HNRNPLP14866 589 aaKnown RBP eCLIP10.54□□□□□ -0.72
CAPN3-216ENST00000567071 RPL9P32969 192 aaKnown RBP10.54□□□□□ -0.72
CAPN3-216ENST00000567071 GPR17Q13304 367 aa10.54□□□□□ -0.72
CAPN3-216ENST00000567071 PRPF4BQ13523 1007 aaKnown RBP10.54□□□□□ -0.72
CAPN3-216ENST00000567071 ZNF268Q14587 947 aaPredicted RBP10.54□□□□□ -0.72
CAPN3-216ENST00000567071 ME3Q16798 604 aa10.54□□□□□ -0.72
CAPN3-216ENST00000567071 PTPRNQ16849 979 aa10.54□□□□□ -0.72
CAPN3-216ENST00000567071 B3GNT9Q6UX72 402 aa10.54□□□□□ -0.72
CAPN3-216ENST00000567071 TRMT11Q7Z4G4 463 aaKnown RBP10.54□□□□□ -0.72
CAPN3-216ENST00000567071 C4orf19Q8IY42 314 aa10.54□□□□□ -0.72
CAPN3-216ENST00000567071 NECAB1Q8N987 351 aa10.54□□□□□ -0.72
CAPN3-216ENST00000567071 TTC9Q92623 222 aa10.54□□□□□ -0.72
CAPN3-216ENST00000567071 MRPS31Q92665 395 aaKnown RBP10.54□□□□□ -0.72
CAPN3-216ENST00000567071 TMX3Q96JJ7 454 aa10.54□□□□□ -0.72
CAPN3-216ENST00000567071 CXCL16Q9H2A7 254 aa10.54□□□□□ -0.72
CAPN3-216ENST00000567071 CPNE5Q9HCH3 593 aa10.54□□□□□ -0.72
CAPN3-216ENST00000567071 FTSJ1Q9UET6 329 aa10.54□□□□□ -0.72
CAPN3-216ENST00000567071 BRPF3Q9ULD4 1205 aa10.54□□□□□ -0.72
CAPN3-216ENST00000567071 PCDHB8Q9UN66 801 aa10.54□□□□□ -0.72
CAPN3-216ENST00000567071 FNDC3AQ9Y2H6 1198 aaKnown RBP10.54□□□□□ -0.72
CAPN3-216ENST00000567071 SLC27A5Q9Y2P5 690 aa10.54□□□□□ -0.72
CAPN3-216ENST00000567071 MYO18AQ92614 2054 aaKnown RBP10.54□□□□□ -0.72
CAPN3-216ENST00000567071 DENND4CQ5VZ89 1909 aa10.54□□□□□ -0.72
CAPN3-216ENST00000567071 FBN2P35556 2912 aa10.53□□□□□ -0.72
CAPN3-216ENST00000567071 TCHHQ07283 1943 aa10.53□□□□□ -0.72
CAPN3-216ENST00000567071 IGHV1OR15-9A0A0B4J2B8 117 aa10.53□□□□□ -0.72
CAPN3-216ENST00000567071 SMIM28A0A1B0GU29 152 aa10.53□□□□□ -0.72
CAPN3-216ENST00000567071 MYMKA6NI61 221 aa10.53□□□□□ -0.72
CAPN3-216ENST00000567071 BRINP1O60477 761 aa10.53□□□□□ -0.72
CAPN3-216ENST00000567071 AFPP02771 609 aaKnown RBP10.53□□□□□ -0.72
CAPN3-216ENST00000567071 APODP05090 189 aa10.53□□□□□ -0.72
CAPN3-216ENST00000567071 TUFMP49411 452 aaKnown RBP10.53□□□□□ -0.72
CAPN3-216ENST00000567071 PCBP4P57723 403 aaKnown RBP10.53□□□□□ -0.72
CAPN3-216ENST00000567071 RTN1Q16799 776 aa10.53□□□□□ -0.72
CAPN3-216ENST00000567071 FAM187BQ17R55 369 aa10.53□□□□□ -0.72
CAPN3-216ENST00000567071 HLA-BQ31612 363 aa10.53□□□□□ -0.72
CAPN3-216ENST00000567071 TBC1D25Q3MII6 688 aa10.53□□□□□ -0.72
CAPN3-216ENST00000567071 Q4G0T1 1027 aa10.53□□□□□ -0.72
CAPN3-216ENST00000567071 CENPPQ6IPU0 288 aa10.53□□□□□ -0.72
CAPN3-216ENST00000567071 ARMCX5Q6P1M9 558 aa10.53□□□□□ -0.72
CAPN3-216ENST00000567071 SGMS1Q86VZ5 419 aa10.53□□□□□ -0.72
CAPN3-216ENST00000567071 NAF1Q96HR8 494 aaKnown RBP10.53□□□□□ -0.72
CAPN3-216ENST00000567071 IPO9Q96P70 1041 aaKnown RBP10.53□□□□□ -0.72
CAPN3-216ENST00000567071 SEPT5Q99719 369 aaPredicted RBP10.53□□□□□ -0.72
CAPN3-216ENST00000567071 LXNQ9BS40 222 aa10.53□□□□□ -0.72
CAPN3-216ENST00000567071 C2orf40Q9H1Z8 148 aa10.53□□□□□ -0.72
CAPN3-216ENST00000567071 IL21RQ9HBE5 538 aa10.53□□□□□ -0.72
CAPN3-216ENST00000567071 XPNPEP1Q9NQW7 623 aa10.53□□□□□ -0.72
CAPN3-216ENST00000567071 CALCOCO1Q9P1Z2 691 aa10.53□□□□□ -0.72
CAPN3-216ENST00000567071 HSFX1Q9UBD0 423 aa10.53□□□□□ -0.72
CAPN3-216ENST00000567071 CYP8B1Q9UNU6 501 aa10.53□□□□□ -0.72
CAPN3-216ENST00000567071 WNT6Q9Y6F9 365 aa10.53□□□□□ -0.72
CAPN3-216ENST00000567071 MTMR11A4FU01 709 aa10.52□□□□□ -0.73
CAPN3-216ENST00000567071 ZBTB43O43298 467 aa10.52□□□□□ -0.73
CAPN3-216ENST00000567071 DTNBO60941 627 aa10.52□□□□□ -0.73
CAPN3-216ENST00000567071 DGAT1O75907 488 aa10.52□□□□□ -0.73
CAPN3-216ENST00000567071 OR4Q2P0C623 313 aa10.52□□□□□ -0.73
Retrieved 100 of 20,778 RNA–protein pairs in 29.8 ms