RNA–Protein interactions for RNA: ENST00000567023.5

COMMD4-216, Transcript of COMM domain containing 4, humanhuman

TSL 2

Gene COMMD4, Length 926 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COMMD4-216ENST00000567023 RDH13Q8NBN7 331 aa15.27■□□□□ 0.04
COMMD4-216ENST00000567023 KBTBD7Q8WVZ9 684 aa15.27■□□□□ 0.04
COMMD4-216ENST00000567023 CEP295NLQ96MC4 621 aa15.27■□□□□ 0.04
COMMD4-216ENST00000567023 BLZF1Q9H2G9 400 aa15.27■□□□□ 0.04
COMMD4-216ENST00000567023 THG1LQ9NWX6 298 aaKnown RBP15.27■□□□□ 0.04
COMMD4-216ENST00000567023 UXTQ9UBK9 157 aaPredicted RBP15.27■□□□□ 0.04
COMMD4-216ENST00000567023 CDH9Q9ULB4 789 aa15.27■□□□□ 0.04
COMMD4-216ENST00000567023 SPTBN4Q9H254 2564 aa15.27■□□□□ 0.03
COMMD4-216ENST00000567023 OTOGLQ3ZCN5 2332 aa15.26■□□□□ 0.03
COMMD4-216ENST00000567023 SLC38A8A6NNN8 435 aa15.26■□□□□ 0.03
COMMD4-216ENST00000567023 SPECC1L-ADORA2AF8WAN1 911 aa15.26■□□□□ 0.03
COMMD4-216ENST00000567023 CLIC2O15247 247 aa15.26■□□□□ 0.03
COMMD4-216ENST00000567023 TDGF1P13385 188 aa15.26■□□□□ 0.03
COMMD4-216ENST00000567023 WARSP23381 471 aaKnown RBP15.26■□□□□ 0.03
COMMD4-216ENST00000567023 LMO2P25791 158 aa15.26■□□□□ 0.03
COMMD4-216ENST00000567023 CTHP32929 405 aa15.26■□□□□ 0.03
COMMD4-216ENST00000567023 AVPR1AP37288 418 aa15.26■□□□□ 0.03
COMMD4-216ENST00000567023 MAGEA11P43364 429 aa15.26■□□□□ 0.03
COMMD4-216ENST00000567023 KPNA1P52294 538 aaPredicted RBP15.26■□□□□ 0.03
COMMD4-216ENST00000567023 PPP2R5DQ14738 602 aa15.26■□□□□ 0.03
COMMD4-216ENST00000567023 MAPRE1Q15691 268 aaKnown RBP15.26■□□□□ 0.03
COMMD4-216ENST00000567023 DDR2Q16832 855 aa15.26■□□□□ 0.03
COMMD4-216ENST00000567023 KNOP1Q1ED39 458 aaKnown RBP15.26■□□□□ 0.03
COMMD4-216ENST00000567023 MON1AQ86VX9 555 aa15.26■□□□□ 0.03
COMMD4-216ENST00000567023 SPATA2LQ8IUW3 424 aaPredicted RBP15.26■□□□□ 0.03
COMMD4-216ENST00000567023 NELFCDQ8IXH7 590 aa15.26■□□□□ 0.03
COMMD4-216ENST00000567023 CEP57L1Q8IYX8 460 aa15.26■□□□□ 0.03
COMMD4-216ENST00000567023 MAB21L3Q8N8X9 362 aa15.26■□□□□ 0.03
COMMD4-216ENST00000567023 ATRIPQ8WXE1 791 aa15.26■□□□□ 0.03
COMMD4-216ENST00000567023 RUBCNQ92622 972 aa15.26■□□□□ 0.03
COMMD4-216ENST00000567023 ZFYVE19Q96K21 471 aa15.26■□□□□ 0.03
COMMD4-216ENST00000567023 FNBP1Q96RU3 617 aa15.26■□□□□ 0.03
COMMD4-216ENST00000567023 CGRRF1Q99675 332 aa15.26■□□□□ 0.03
COMMD4-216ENST00000567023 FAM83CQ9BQN1 747 aa15.26■□□□□ 0.03
COMMD4-216ENST00000567023 KIF9Q9HAQ2 790 aa15.26■□□□□ 0.03
COMMD4-216ENST00000567023 SLC39A2Q9NP94 309 aa15.26■□□□□ 0.03
COMMD4-216ENST00000567023 TDP1Q9NUW8 608 aa15.26■□□□□ 0.03
COMMD4-216ENST00000567023 GTSE1Q9NYZ3 720 aa15.26■□□□□ 0.03
COMMD4-216ENST00000567023 HCRTO43612 131 aa15.25■□□□□ 0.03
COMMD4-216ENST00000567023 ACTN4O43707 911 aaKnown RBP15.25■□□□□ 0.03
COMMD4-216ENST00000567023 KLRC4O43908 158 aa15.25■□□□□ 0.03
COMMD4-216ENST00000567023 TACC1O75410 805 aa15.25■□□□□ 0.03
COMMD4-216ENST00000567023 TADA3O75528 432 aa15.25■□□□□ 0.03
COMMD4-216ENST00000567023 STAU1O95793 577 aaKnown RBP15.25■□□□□ 0.03
COMMD4-216ENST00000567023 DLATP10515 647 aaKnown RBP15.25■□□□□ 0.03
COMMD4-216ENST00000567023 TNNI1P19237 187 aa15.25■□□□□ 0.03
COMMD4-216ENST00000567023 CMA1P23946 247 aa15.25■□□□□ 0.03
COMMD4-216ENST00000567023 AFMP43652 599 aa15.25■□□□□ 0.03
COMMD4-216ENST00000567023 SOX9P48436 509 aa15.25■□□□□ 0.03
COMMD4-216ENST00000567023 CCR3P51677 355 aa15.25■□□□□ 0.03
COMMD4-216ENST00000567023 NRLP54845 237 aa15.25■□□□□ 0.03
COMMD4-216ENST00000567023 LRRC32Q14392 662 aa15.25■□□□□ 0.03
COMMD4-216ENST00000567023 GAS6Q14393 721 aa15.25■□□□□ 0.03
COMMD4-216ENST00000567023 ZNF268Q14587 947 aaPredicted RBP15.25■□□□□ 0.03
COMMD4-216ENST00000567023 WDR44Q5JSH3 913 aa15.25■□□□□ 0.03
COMMD4-216ENST00000567023 DGKKQ5KSL6 1271 aa15.25■□□□□ 0.03
COMMD4-216ENST00000567023 TXNDC8Q6A555 127 aa15.25■□□□□ 0.03
COMMD4-216ENST00000567023 TXNDC11Q6PKC3 985 aa15.25■□□□□ 0.03
COMMD4-216ENST00000567023 TSSK4Q6SA08 328 aa15.25■□□□□ 0.03
COMMD4-216ENST00000567023 VSTM1Q6UX27 236 aa15.25■□□□□ 0.03
COMMD4-216ENST00000567023 C4orf50Q6ZRC1 276 aa15.25■□□□□ 0.03
COMMD4-216ENST00000567023 GOLGA5Q8TBA6 731 aa15.25■□□□□ 0.03
COMMD4-216ENST00000567023 ZNF516Q92618 1163 aa15.25■□□□□ 0.03
COMMD4-216ENST00000567023 MRPS31Q92665 395 aaKnown RBP15.25■□□□□ 0.03
COMMD4-216ENST00000567023 USP13Q92995 863 aaPredicted RBP15.25■□□□□ 0.03
COMMD4-216ENST00000567023 SMG9Q9H0W8 520 aaKnown RBP15.25■□□□□ 0.03
COMMD4-216ENST00000567023 GZF1Q9H116 711 aaPredicted RBP15.25■□□□□ 0.03
COMMD4-216ENST00000567023 EPC1Q9H2F5 836 aa15.25■□□□□ 0.03
COMMD4-216ENST00000567023 GKN1Q9NS71 199 aa15.25■□□□□ 0.03
COMMD4-216ENST00000567023 MAGED2Q9UNF1 606 aaPredicted RBP15.25■□□□□ 0.03
COMMD4-216ENST00000567023 ATP2C2O75185 946 aa15.24■□□□□ 0.03
COMMD4-216ENST00000567023 PAPSS2O95340 614 aaPredicted RBP15.24■□□□□ 0.03
COMMD4-216ENST00000567023 MYL1P05976 194 aa15.24■□□□□ 0.03
COMMD4-216ENST00000567023 CYP2J2P51589 502 aa15.24■□□□□ 0.03
COMMD4-216ENST00000567023 CLDN10P78369 228 aa15.24■□□□□ 0.03
COMMD4-216ENST00000567023 TNK2Q07912 1038 aa15.24■□□□□ 0.03
COMMD4-216ENST00000567023 PSMD2Q13200 908 aa15.24■□□□□ 0.03
COMMD4-216ENST00000567023 CCINQ13939 588 aa15.24■□□□□ 0.03
COMMD4-216ENST00000567023 CCDC142Q17RM4 750 aa15.24■□□□□ 0.03
COMMD4-216ENST00000567023 ITPRIPL2Q3MIP1 535 aa15.24■□□□□ 0.03
COMMD4-216ENST00000567023 SDHAF4Q5VUM1 108 aa15.24■□□□□ 0.03
COMMD4-216ENST00000567023 SYNPOQ8N3V7 929 aa15.24■□□□□ 0.03
COMMD4-216ENST00000567023 SPEM1Q8N4L4 309 aa15.24■□□□□ 0.03
COMMD4-216ENST00000567023 CCDC127Q96BQ5 260 aa15.24■□□□□ 0.03
COMMD4-216ENST00000567023 PAGE5Q96GU1 130 aa15.24■□□□□ 0.03
COMMD4-216ENST00000567023 SPATA17Q96L03 361 aa15.24■□□□□ 0.03
COMMD4-216ENST00000567023 MMS19Q96T76 1030 aa15.24■□□□□ 0.03
COMMD4-216ENST00000567023 SYT15Q9BQS2 421 aa15.24■□□□□ 0.03
COMMD4-216ENST00000567023 VRTNQ9H8Y1 702 aa15.24■□□□□ 0.03
COMMD4-216ENST00000567023 CRTAC1Q9NQ79 661 aa15.24■□□□□ 0.03
COMMD4-216ENST00000567023 MAGEC2Q9UBF1 373 aaPredicted RBP15.24■□□□□ 0.03
COMMD4-216ENST00000567023 USP25Q9UHP3 1055 aa15.24■□□□□ 0.03
COMMD4-216ENST00000567023 SERTAD1Q9UHV2 236 aa15.24■□□□□ 0.03
COMMD4-216ENST00000567023 CCL26Q9Y258 94 aa15.24■□□□□ 0.03
COMMD4-216ENST00000567023 KIF26AQ9ULI4 1882 aaPredicted RBP15.24■□□□□ 0.03
COMMD4-216ENST00000567023 OBSL1O75147 1896 aa15.23■□□□□ 0.03
COMMD4-216ENST00000567023 ATICP31939 592 aa15.23■□□□□ 0.03
COMMD4-216ENST00000567023 GNL1P36915 607 aaPredicted RBP15.23■□□□□ 0.03
COMMD4-216ENST00000567023 CXCL12P48061 93 aa15.23■□□□□ 0.03
COMMD4-216ENST00000567023 STK4Q13043 487 aa15.23■□□□□ 0.03
Retrieved 100 of 20,778 RNA–protein pairs in 32.7 ms