RNA–Protein interactions for RNA: ENST00000566843.1

COMMD4-215, Transcript of COMM domain containing 4, humanhuman

TSL 2

Gene COMMD4, Length 2,284 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COMMD4-215ENST00000566843 TCF4P15884 667 aa16.45■□□□□ 0.22
COMMD4-215ENST00000566843 ATF7P17544 494 aaPredicted RBP16.45■□□□□ 0.22
COMMD4-215ENST00000566843 AMPD1P23109 780 aa16.45■□□□□ 0.22
COMMD4-215ENST00000566843 NPTX2P47972 431 aa16.45■□□□□ 0.22
COMMD4-215ENST00000566843 SLC18A2Q05940 514 aa16.45■□□□□ 0.22
COMMD4-215ENST00000566843 SPP2Q13103 211 aa16.45■□□□□ 0.22
COMMD4-215ENST00000566843 MSS51Q4VC12 460 aa16.45■□□□□ 0.22
COMMD4-215ENST00000566843 FNBP1LQ5T0N5 605 aa16.45■□□□□ 0.22
COMMD4-215ENST00000566843 SH2D5Q6ZV89 423 aa16.45■□□□□ 0.22
COMMD4-215ENST00000566843 CCNJLQ8IV13 435 aa16.45■□□□□ 0.22
COMMD4-215ENST00000566843 C4orf19Q8IY42 314 aa16.45■□□□□ 0.22
COMMD4-215ENST00000566843 GPD1LQ8N335 351 aa16.45■□□□□ 0.22
COMMD4-215ENST00000566843 NAT8LQ8N9F0 302 aa16.45■□□□□ 0.22
COMMD4-215ENST00000566843 CCDC110Q8TBZ0 833 aa16.45■□□□□ 0.22
COMMD4-215ENST00000566843 ASCC2Q9H1I8 757 aaPredicted RBP16.45■□□□□ 0.22
COMMD4-215ENST00000566843 DMAP1Q9NPF5 467 aaPredicted RBP16.45■□□□□ 0.22
COMMD4-215ENST00000566843 STRIP2Q9ULQ0 834 aa16.45■□□□□ 0.22
COMMD4-215ENST00000566843 ASTN2O75129 1339 aaPredicted RBP16.45■□□□□ 0.22
COMMD4-215ENST00000566843 TMEM191CA6NGB0 347 aa16.44■□□□□ 0.22
COMMD4-215ENST00000566843 CAPN14A8MX76 684 aa16.44■□□□□ 0.22
COMMD4-215ENST00000566843 TMEM191BP0C7N4 346 aa16.44■□□□□ 0.22
COMMD4-215ENST00000566843 CLDN10P78369 228 aa16.44■□□□□ 0.22
COMMD4-215ENST00000566843 C3orf62Q6ZUJ4 267 aa16.44■□□□□ 0.22
COMMD4-215ENST00000566843 MYLK4Q86YV6 388 aaPredicted RBP16.44■□□□□ 0.22
COMMD4-215ENST00000566843 TMPRSS6Q8IU80 811 aa16.44■□□□□ 0.22
COMMD4-215ENST00000566843 CPT1BQ92523 772 aa16.44■□□□□ 0.22
COMMD4-215ENST00000566843 AGO4Q9HCK5 861 aaKnown RBP16.44■□□□□ 0.22
COMMD4-215ENST00000566843 PPP1R1BQ9UD71 204 aaPredicted RBP16.44■□□□□ 0.22
COMMD4-215ENST00000566843 SLC4A7Q9Y6M7 1214 aa16.44■□□□□ 0.22
COMMD4-215ENST00000566843 LPXNO60711 386 aa16.44■□□□□ 0.22
COMMD4-215ENST00000566843 ANPEPP15144 967 aa16.44■□□□□ 0.22
COMMD4-215ENST00000566843 SERPINB4P48594 390 aa16.44■□□□□ 0.22
COMMD4-215ENST00000566843 GAD2Q05329 585 aa16.44■□□□□ 0.22
COMMD4-215ENST00000566843 TBC1D10BQ4KMP7 808 aaPredicted RBP16.44■□□□□ 0.22
COMMD4-215ENST00000566843 FAM102BQ5T8I3 360 aa16.44■□□□□ 0.22
COMMD4-215ENST00000566843 ANKRD22Q5VYY1 191 aa16.44■□□□□ 0.22
COMMD4-215ENST00000566843 TTC7BQ86TV6 843 aa16.44■□□□□ 0.22
COMMD4-215ENST00000566843 SPIRE2Q8WWL2 714 aa16.44■□□□□ 0.22
COMMD4-215ENST00000566843 APOPT1Q96IL0 206 aa16.44■□□□□ 0.22
COMMD4-215ENST00000566843 NTPCRQ9BSD7 190 aaKnown RBP16.44■□□□□ 0.22
COMMD4-215ENST00000566843 TMEM121Q9BTD3 319 aa16.44■□□□□ 0.22
COMMD4-215ENST00000566843 TMX4Q9H1E5 349 aaPredicted RBP16.44■□□□□ 0.22
COMMD4-215ENST00000566843 PKD2L1Q9P0L9 805 aa16.44■□□□□ 0.22
COMMD4-215ENST00000566843 PLA2G4CQ9UP65 541 aa16.44■□□□□ 0.22
COMMD4-215ENST00000566843 IVNS1ABPQ9Y6Y0 642 aa16.44■□□□□ 0.22
COMMD4-215ENST00000566843 TMEM150BA6NC51 233 aa16.43■□□□□ 0.22
COMMD4-215ENST00000566843 GOLGA8RI6L899 631 aa16.43■□□□□ 0.22
COMMD4-215ENST00000566843 SGK1O00141 431 aa16.43■□□□□ 0.22
COMMD4-215ENST00000566843 MT-ND3P03897 115 aa16.43■□□□□ 0.22
COMMD4-215ENST00000566843 MYL2P10916 166 aa16.43■□□□□ 0.22
COMMD4-215ENST00000566843 DPEP1P16444 411 aa16.43■□□□□ 0.22
COMMD4-215ENST00000566843 GARTP22102 1010 aa16.43■□□□□ 0.22
COMMD4-215ENST00000566843 CRABP2P29373 138 aa16.43■□□□□ 0.22
COMMD4-215ENST00000566843 CDKN2BP42772 138 aa16.43■□□□□ 0.22
COMMD4-215ENST00000566843 PSMC4P43686 418 aa16.43■□□□□ 0.22
COMMD4-215ENST00000566843 HSD17B4P51659 736 aa16.43■□□□□ 0.22
COMMD4-215ENST00000566843 ZNF252P-AS1Q0IIN9 211 aa16.43■□□□□ 0.22
COMMD4-215ENST00000566843 TRMT5Q32P41 509 aaKnown RBP16.43■□□□□ 0.22
COMMD4-215ENST00000566843 TFDP3Q5H9I0 405 aa16.43■□□□□ 0.22
COMMD4-215ENST00000566843 PASD1Q8IV76 773 aa16.43■□□□□ 0.22
COMMD4-215ENST00000566843 SMC1BQ8NDV3 1235 aa16.43■□□□□ 0.22
COMMD4-215ENST00000566843 DTNBP1Q96EV8 351 aa16.43■□□□□ 0.22
COMMD4-215ENST00000566843 KLF6Q99612 283 aaPredicted RBP16.43■□□□□ 0.22
COMMD4-215ENST00000566843 SH2D3AQ9BRG2 576 aa16.43■□□□□ 0.22
COMMD4-215ENST00000566843 ALG13Q9NP73 1137 aaKnown RBP16.43■□□□□ 0.22
COMMD4-215ENST00000566843 ANKEF1Q9NU02 776 aa16.43■□□□□ 0.22
COMMD4-215ENST00000566843 CNTN6Q9UQ52 1028 aa16.43■□□□□ 0.22
COMMD4-215ENST00000566843 TBC1D30Q9Y2I9 924 aa16.43■□□□□ 0.22
COMMD4-215ENST00000566843 GOLGA8SH3BPF8 625 aa16.43■□□□□ 0.22
COMMD4-215ENST00000566843 GOLGA8MH3BSY2 632 aa16.43■□□□□ 0.22
COMMD4-215ENST00000566843 PDLIM1O00151 329 aa16.43■□□□□ 0.22
COMMD4-215ENST00000566843 PLA2G6O60733 806 aa16.43■□□□□ 0.22
COMMD4-215ENST00000566843 BGNP21810 368 aa16.43■□□□□ 0.22
COMMD4-215ENST00000566843 LAMB3Q13751 1172 aa16.43■□□□□ 0.22
COMMD4-215ENST00000566843 UGCGQ16739 394 aa16.43■□□□□ 0.22
COMMD4-215ENST00000566843 BRDTQ58F21 947 aaPredicted RBP16.43■□□□□ 0.22
COMMD4-215ENST00000566843 WDR44Q5JSH3 913 aa16.43■□□□□ 0.22
COMMD4-215ENST00000566843 FBXO36Q8NEA4 188 aa16.43■□□□□ 0.22
COMMD4-215ENST00000566843 CHURC1Q8WUH1 139 aa16.43■□□□□ 0.22
COMMD4-215ENST00000566843 KIFC3Q9BVG8 833 aa16.43■□□□□ 0.22
COMMD4-215ENST00000566843 NMUR2Q9GZQ4 415 aa16.43■□□□□ 0.22
COMMD4-215ENST00000566843 GPAMQ9HCL2 828 aa16.43■□□□□ 0.22
COMMD4-215ENST00000566843 DDX56Q9NY93 547 aaKnown RBP16.43■□□□□ 0.22
COMMD4-215ENST00000566843 KCNK4Q9NYG8 393 aa16.43■□□□□ 0.22
COMMD4-215ENST00000566843 IL1RAPL1Q9NZN1 696 aa16.43■□□□□ 0.22
COMMD4-215ENST00000566843 ZNRF3Q9ULT6 936 aa16.43■□□□□ 0.22
COMMD4-215ENST00000566843 TMX2Q9Y320 296 aa16.43■□□□□ 0.22
COMMD4-215ENST00000566843 UBIAD1Q9Y5Z9 338 aa16.43■□□□□ 0.22
COMMD4-215ENST00000566843 TCRBV5S1A1TA0A578 114 aa16.42■□□□□ 0.22
COMMD4-215ENST00000566843 B2RBV5 119 aa16.42■□□□□ 0.22
COMMD4-215ENST00000566843 FAM155BO75949 473 aa16.42■□□□□ 0.22
COMMD4-215ENST00000566843 HLA-DRAP01903 254 aa16.42■□□□□ 0.22
COMMD4-215ENST00000566843 UBTFL6P0CB48 400 aaPredicted RBP16.42■□□□□ 0.22
COMMD4-215ENST00000566843 GSTT1P30711 240 aa16.42■□□□□ 0.22
COMMD4-215ENST00000566843 RPL7AP62424 266 aaKnown RBP16.42■□□□□ 0.22
COMMD4-215ENST00000566843 ZACNQ401N2 412 aa16.42■□□□□ 0.22
COMMD4-215ENST00000566843 ARHGAP22Q7Z5H3 698 aa16.42■□□□□ 0.22
COMMD4-215ENST00000566843 RHPN2Q8IUC4 686 aa16.42■□□□□ 0.22
COMMD4-215ENST00000566843 SAMD3Q8N6K7 520 aa16.42■□□□□ 0.22
COMMD4-215ENST00000566843 SERAC1Q96JX3 654 aa16.42■□□□□ 0.22
Retrieved 100 of 20,778 RNA–protein pairs in 29.8 ms