RNA–Protein interactions for RNA: ENST00000566808.2

CDH3-205, Transcript of cadherin 3, humanhuman

TSL 5

Gene CDH3, Length 573 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDH3-205ENST00000566808 FDPSP14324 419 aaKnown RBP18.18■□□□□ 0.5
CDH3-205ENST00000566808 GUCY2FP51841 1108 aa18.18■□□□□ 0.5
CDH3-205ENST00000566808 SEC13P55735 322 aa18.18■□□□□ 0.5
CDH3-205ENST00000566808 FAM193AP78312 1265 aa18.18■□□□□ 0.5
CDH3-205ENST00000566808 MAPK7Q13164 816 aa18.18■□□□□ 0.5
CDH3-205ENST00000566808 RABEPKQ7Z6M1 372 aa18.18■□□□□ 0.5
CDH3-205ENST00000566808 TTC30AQ86WT1 665 aa18.18■□□□□ 0.5
CDH3-205ENST00000566808 CEP76Q8TAP6 659 aa18.18■□□□□ 0.5
CDH3-205ENST00000566808 GTPBP2Q9BX10 602 aaKnown RBP18.18■□□□□ 0.5
CDH3-205ENST00000566808 SCUBE2Q9NQ36 999 aa18.18■□□□□ 0.5
CDH3-205ENST00000566808 DDX19AQ9NUU7 478 aaKnown RBP18.18■□□□□ 0.5
CDH3-205ENST00000566808 MBD1Q9UIS9 605 aaPredicted RBP18.18■□□□□ 0.5
CDH3-205ENST00000566808 CIZ1Q9ULV3 898 aaPredicted RBP18.18■□□□□ 0.5
CDH3-205ENST00000566808 KIAA1024Q9UPX6 916 aa18.18■□□□□ 0.5
CDH3-205ENST00000566808 PTPRBP23467 1997 aa18.18■□□□□ 0.5
CDH3-205ENST00000566808 CSH1P0DML2 217 aa18.17■□□□□ 0.5
CDH3-205ENST00000566808 CSH2P0DML3 217 aa18.17■□□□□ 0.5
CDH3-205ENST00000566808 MATR3P43243 847 aaKnown RBP eCLIP18.17■□□□□ 0.5
CDH3-205ENST00000566808 GFPT1Q06210 699 aaPredicted RBP18.17■□□□□ 0.5
CDH3-205ENST00000566808 TRIM29Q14134 588 aa18.17■□□□□ 0.5
CDH3-205ENST00000566808 KYAT1Q16773 422 aa18.17■□□□□ 0.5
CDH3-205ENST00000566808 RLN3Q8WXF3 142 aa18.17■□□□□ 0.5
CDH3-205ENST00000566808 ADAMTS14Q8WXS8 1223 aa18.17■□□□□ 0.5
CDH3-205ENST00000566808 UXTQ9UBK9 157 aaPredicted RBP18.17■□□□□ 0.5
CDH3-205ENST00000566808 SLC6A14Q9UN76 642 aa18.17■□□□□ 0.5
CDH3-205ENST00000566808 MYO18AQ92614 2054 aaKnown RBP18.16■□□□□ 0.5
CDH3-205ENST00000566808 K7EQS6 105 aa18.16■□□□□ 0.5
CDH3-205ENST00000566808 TADA3O75528 432 aa18.16■□□□□ 0.5
CDH3-205ENST00000566808 NFATC1O95644 943 aa18.16■□□□□ 0.5
CDH3-205ENST00000566808 CKMP06732 381 aa18.16■□□□□ 0.5
CDH3-205ENST00000566808 SERPINF2P08697 491 aa18.16■□□□□ 0.5
CDH3-205ENST00000566808 MRPS21P82921 87 aaKnown RBP18.16■□□□□ 0.5
CDH3-205ENST00000566808 BYSLQ13895 437 aaKnown RBP18.16■□□□□ 0.5
CDH3-205ENST00000566808 DUOXA1Q1HG43 343 aa18.16■□□□□ 0.5
CDH3-205ENST00000566808 HSF5Q4G112 596 aaPredicted RBP18.16■□□□□ 0.5
CDH3-205ENST00000566808 SPATA1Q5VX52 437 aa18.16■□□□□ 0.5
CDH3-205ENST00000566808 METTL23Q86XA0 190 aa18.16■□□□□ 0.5
CDH3-205ENST00000566808 EFCAB13Q8IY85 973 aa18.16■□□□□ 0.5
CDH3-205ENST00000566808 MINDY1Q8N5J2 469 aa18.16■□□□□ 0.5
CDH3-205ENST00000566808 CCDC33Q8N5R6 958 aa18.16■□□□□ 0.5
CDH3-205ENST00000566808 GLIS3Q8NEA6 775 aa18.16■□□□□ 0.5
CDH3-205ENST00000566808 SPIRE2Q8WWL2 714 aa18.16■□□□□ 0.5
CDH3-205ENST00000566808 NTPCRQ9BSD7 190 aaKnown RBP18.16■□□□□ 0.5
CDH3-205ENST00000566808 RUSC1Q9BVN2 902 aa18.16■□□□□ 0.5
CDH3-205ENST00000566808 CAPN10Q9HC96 672 aa18.16■□□□□ 0.5
CDH3-205ENST00000566808 TRAV19A0A0A6YYK7 116 aa18.15■□□□□ 0.5
CDH3-205ENST00000566808 LACTBL1A8MY62 500 aa18.15■□□□□ 0.5
CDH3-205ENST00000566808 USP17L7P0C7H9 530 aa18.15■□□□□ 0.5
CDH3-205ENST00000566808 MAPTP10636 758 aaKnown RBP18.15■□□□□ 0.5
CDH3-205ENST00000566808 HNRNPLP14866 589 aaKnown RBP eCLIP18.15■□□□□ 0.5
CDH3-205ENST00000566808 ITPKAP23677 461 aa18.15■□□□□ 0.5
CDH3-205ENST00000566808 OPRD1P41143 372 aa18.15■□□□□ 0.5
CDH3-205ENST00000566808 TNFSF9P41273 254 aa18.15■□□□□ 0.5
CDH3-205ENST00000566808 FXR2P51116 673 aaKnown RBP eCLIP18.15■□□□□ 0.5
CDH3-205ENST00000566808 CDR1P51861 262 aa18.15■□□□□ 0.5
CDH3-205ENST00000566808 ENOX2Q16206 610 aaKnown RBP18.15■□□□□ 0.5
CDH3-205ENST00000566808 C9orf57Q5W0N0 161 aa18.15■□□□□ 0.5
CDH3-205ENST00000566808 TMEM92Q6UXU6 159 aa18.15■□□□□ 0.5
CDH3-205ENST00000566808 CCNI2Q6ZMN8 369 aaPredicted RBP18.15■□□□□ 0.5
CDH3-205ENST00000566808 THEM5Q8N1Q8 247 aa18.15■□□□□ 0.5
CDH3-205ENST00000566808 TMEM161BQ8NDZ6 487 aa18.15■□□□□ 0.5
CDH3-205ENST00000566808 TTC16Q8NEE8 873 aa18.15■□□□□ 0.5
CDH3-205ENST00000566808 TRMT2BQ96GJ1 504 aaKnown RBP18.15■□□□□ 0.5
CDH3-205ENST00000566808 TIPINQ9BVW5 301 aa18.15■□□□□ 0.5
CDH3-205ENST00000566808 HAPLN2Q9GZV7 340 aa18.15■□□□□ 0.5
CDH3-205ENST00000566808 TRPC7Q9HCX4 862 aa18.15■□□□□ 0.5
CDH3-205ENST00000566808 POLMQ9NP87 494 aaPredicted RBP18.15■□□□□ 0.5
CDH3-205ENST00000566808 FSCN3Q9NQT6 498 aa18.15■□□□□ 0.5
CDH3-205ENST00000566808 DNAAF2Q9NVR5 837 aaKnown RBP18.15■□□□□ 0.5
CDH3-205ENST00000566808 BCCIPQ9P287 314 aaKnown RBP eCLIP18.15■□□□□ 0.5
CDH3-205ENST00000566808 KCNG1Q9UIX4 513 aa18.15■□□□□ 0.5
CDH3-205ENST00000566808 MAGED2Q9UNF1 606 aaPredicted RBP18.15■□□□□ 0.5
CDH3-205ENST00000566808 PCDHB5Q9Y5E4 795 aa18.15■□□□□ 0.5
CDH3-205ENST00000566808 STK24Q9Y6E0 443 aa18.15■□□□□ 0.5
CDH3-205ENST00000566808 ZNF462Q96JM2 2506 aa18.15■□□□□ 0.5
CDH3-205ENST00000566808 AP5Z1O43299 807 aa18.14■□□□□ 0.49
CDH3-205ENST00000566808 CD59P13987 128 aa18.14■□□□□ 0.49
CDH3-205ENST00000566808 TCF3P15923 654 aa18.14■□□□□ 0.49
CDH3-205ENST00000566808 SMTNP53814 917 aa18.14■□□□□ 0.49
CDH3-205ENST00000566808 MAP7D1Q3KQU3 841 aa18.14■□□□□ 0.49
CDH3-205ENST00000566808 LRRTM3Q86VH5 581 aa18.14■□□□□ 0.49
CDH3-205ENST00000566808 DCP1BQ8IZD4 617 aaKnown RBP18.14■□□□□ 0.49
CDH3-205ENST00000566808 ADAM32Q8TC27 787 aa18.14■□□□□ 0.49
CDH3-205ENST00000566808 SNX29Q8TEQ0 813 aa18.14■□□□□ 0.49
CDH3-205ENST00000566808 CACNA2D2Q9NY47 1150 aa18.14■□□□□ 0.49
CDH3-205ENST00000566808 LRWD1Q9UFC0 647 aa18.14■□□□□ 0.49
CDH3-205ENST00000566808 DNM3Q9UQ16 869 aa18.14■□□□□ 0.49
CDH3-205ENST00000566808 PIRO00625 290 aa18.13■□□□□ 0.49
CDH3-205ENST00000566808 FAM189A1O60320 539 aa18.13■□□□□ 0.49
CDH3-205ENST00000566808 NOL4O94818 638 aa18.13■□□□□ 0.49
CDH3-205ENST00000566808 ADRB2P07550 413 aa18.13■□□□□ 0.49
CDH3-205ENST00000566808 FTH1P19P0C7X4 201 aa18.13■□□□□ 0.49
CDH3-205ENST00000566808 SLC14A1Q13336 389 aa18.13■□□□□ 0.49
CDH3-205ENST00000566808 TRIP6Q15654 476 aaKnown RBP18.13■□□□□ 0.49
CDH3-205ENST00000566808 RINT1Q6NUQ1 792 aa18.13■□□□□ 0.49
CDH3-205ENST00000566808 ALLCQ8N6M5 410 aa18.13■□□□□ 0.49
CDH3-205ENST00000566808 STKLD1Q8NE28 680 aa18.13■□□□□ 0.49
CDH3-205ENST00000566808 HNRNPLLQ8WVV9 542 aaKnown RBP18.13■□□□□ 0.49
CDH3-205ENST00000566808 BICD1Q96G01 975 aa18.13■□□□□ 0.49
CDH3-205ENST00000566808 LRIG1Q96JA1 1093 aa18.13■□□□□ 0.49
Retrieved 100 of 20,778 RNA–protein pairs in 34.5 ms