RNA–Protein interactions for RNA: ENST00000566756.5

CMTM3-213, Transcript of CKLF like MARVEL transmembrane domain containing 3, humanhuman

TSL 2

Gene CMTM3, Length 1,950 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CMTM3-213ENST00000566756 SAYSD1Q9NPB0 183 aa17.65■□□□□ 0.42
CMTM3-213ENST00000566756 CDKN2AIPQ9NXV6 580 aaPredicted RBP17.65■□□□□ 0.42
CMTM3-213ENST00000566756 ZNF148Q9UQR1 794 aa17.65■□□□□ 0.42
CMTM3-213ENST00000566756 DOCK3Q8IZD9 2030 aa17.65■□□□□ 0.42
CMTM3-213ENST00000566756 GAS2O43903 313 aaKnown RBP17.64■□□□□ 0.41
CMTM3-213ENST00000566756 ADCY3O60266 1144 aa17.64■□□□□ 0.41
CMTM3-213ENST00000566756 GCAP28676 217 aa17.64■□□□□ 0.41
CMTM3-213ENST00000566756 ARSEP51690 589 aa17.64■□□□□ 0.41
CMTM3-213ENST00000566756 RPL7AP62424 266 aaKnown RBP17.64■□□□□ 0.41
CMTM3-213ENST00000566756 ZNF252P-AS1Q0IIN9 211 aa17.64■□□□□ 0.41
CMTM3-213ENST00000566756 RNASEH2BQ5TBB1 312 aaKnown RBP17.64■□□□□ 0.41
CMTM3-213ENST00000566756 ASRGL1Q7L266 308 aa17.64■□□□□ 0.41
CMTM3-213ENST00000566756 TBC1D1Q86TI0 1168 aaPredicted RBP17.64■□□□□ 0.41
CMTM3-213ENST00000566756 GDAP1Q8TB36 358 aa17.64■□□□□ 0.41
CMTM3-213ENST00000566756 MAML3Q96JK9 1138 aa17.64■□□□□ 0.41
CMTM3-213ENST00000566756 SMARCAD1Q9H4L7 1026 aa17.64■□□□□ 0.41
CMTM3-213ENST00000566756 TBK1Q9UHD2 729 aa17.64■□□□□ 0.41
CMTM3-213ENST00000566756 SMAPO00193 183 aa17.64■□□□□ 0.41
CMTM3-213ENST00000566756 IGF2BP3O00425 579 aaKnown RBP eCLIP17.64■□□□□ 0.41
CMTM3-213ENST00000566756 ATP5HO75947 161 aa17.64■□□□□ 0.41
CMTM3-213ENST00000566756 EFNA5P52803 228 aa17.64■□□□□ 0.41
CMTM3-213ENST00000566756 ARHGAP1Q07960 439 aa17.64■□□□□ 0.41
CMTM3-213ENST00000566756 IRF5Q13568 498 aa17.64■□□□□ 0.41
CMTM3-213ENST00000566756 SPARCL1Q14515 664 aa17.64■□□□□ 0.41
CMTM3-213ENST00000566756 TMED2Q15363 201 aa17.64■□□□□ 0.41
CMTM3-213ENST00000566756 CGB2Q6NT52 195 aa17.64■□□□□ 0.41
CMTM3-213ENST00000566756 CENPUQ71F23 418 aa17.64■□□□□ 0.41
CMTM3-213ENST00000566756 KLHL29Q96CT2 875 aa17.64■□□□□ 0.41
CMTM3-213ENST00000566756 PITPNM3Q9BZ71 974 aa17.64■□□□□ 0.41
CMTM3-213ENST00000566756 NIF3L1Q9GZT8 377 aa17.64■□□□□ 0.41
CMTM3-213ENST00000566756 SLC5A4Q9NY91 659 aa17.64■□□□□ 0.41
CMTM3-213ENST00000566756 STRIP2Q9ULQ0 834 aa17.64■□□□□ 0.41
CMTM3-213ENST00000566756 SNAI1O95863 264 aaPredicted RBP17.63■□□□□ 0.41
CMTM3-213ENST00000566756 SLC10A3P09131 477 aa17.63■□□□□ 0.41
CMTM3-213ENST00000566756 PECAM1P16284 738 aaPredicted RBP17.63■□□□□ 0.41
CMTM3-213ENST00000566756 CDKN2BP42772 138 aa17.63■□□□□ 0.41
CMTM3-213ENST00000566756 WDR4P57081 412 aaKnown RBP17.63■□□□□ 0.41
CMTM3-213ENST00000566756 SGSM1Q2NKQ1 1148 aa17.63■□□□□ 0.41
CMTM3-213ENST00000566756 SPDYAQ5MJ70 313 aa17.63■□□□□ 0.41
CMTM3-213ENST00000566756 ZBTB41Q5SVQ8 909 aa17.63■□□□□ 0.41
CMTM3-213ENST00000566756 CEP57Q86XR8 500 aa17.63■□□□□ 0.41
CMTM3-213ENST00000566756 FITM2Q8N6M3 262 aa17.63■□□□□ 0.41
CMTM3-213ENST00000566756 TTC13Q8NBP0 860 aa17.63■□□□□ 0.41
CMTM3-213ENST00000566756 SLC35B2Q8TB61 432 aa17.63■□□□□ 0.41
CMTM3-213ENST00000566756 TCP11Q8WWU5 503 aa17.63■□□□□ 0.41
CMTM3-213ENST00000566756 COPS5Q92905 334 aa17.63■□□□□ 0.41
CMTM3-213ENST00000566756 EBF2Q9HAK2 575 aa17.63■□□□□ 0.41
CMTM3-213ENST00000566756 ANKFY1Q9P2R3 1169 aa17.63■□□□□ 0.41
CMTM3-213ENST00000566756 BAIAP2L1Q9UHR4 511 aa17.63■□□□□ 0.41
CMTM3-213ENST00000566756 FAM189A1O60320 539 aa17.62■□□□□ 0.41
CMTM3-213ENST00000566756 KRT10P13645 584 aa17.62■□□□□ 0.41
CMTM3-213ENST00000566756 GJC1P36383 396 aa17.62■□□□□ 0.41
CMTM3-213ENST00000566756 GPS1Q13098 491 aa17.62■□□□□ 0.41
CMTM3-213ENST00000566756 CYP4F22Q6NT55 531 aa17.62■□□□□ 0.41
CMTM3-213ENST00000566756 DCUN1D2Q6PH85 259 aa17.62■□□□□ 0.41
CMTM3-213ENST00000566756 FNIP1Q8TF40 1166 aa17.62■□□□□ 0.41
CMTM3-213ENST00000566756 FAM118BQ9BPY3 351 aa17.62■□□□□ 0.41
CMTM3-213ENST00000566756 CEP83Q9Y592 693 aa17.62■□□□□ 0.41
CMTM3-213ENST00000566756 IGKV6-21A0A0C4DH24 114 aa17.62■□□□□ 0.41
CMTM3-213ENST00000566756 HBP1O60381 514 aa17.62■□□□□ 0.41
CMTM3-213ENST00000566756 TOM1L1O75674 476 aa17.62■□□□□ 0.41
CMTM3-213ENST00000566756 ATF7P17544 494 aaPredicted RBP17.62■□□□□ 0.41
CMTM3-213ENST00000566756 FOXN2P32314 431 aa17.62■□□□□ 0.41
CMTM3-213ENST00000566756 YARSP54577 528 aaKnown RBP17.62■□□□□ 0.41
CMTM3-213ENST00000566756 YWHAEP62258 255 aaKnown RBP17.62■□□□□ 0.41
CMTM3-213ENST00000566756 CAPSQ13938 189 aa17.62■□□□□ 0.41
CMTM3-213ENST00000566756 PDK4Q16654 411 aa17.62■□□□□ 0.41
CMTM3-213ENST00000566756 ATP13A4Q4VNC1 1196 aa17.62■□□□□ 0.41
CMTM3-213ENST00000566756 IER5Q5VY09 327 aa17.62■□□□□ 0.41
CMTM3-213ENST00000566756 GIMAP7Q8NHV1 300 aa17.62■□□□□ 0.41
CMTM3-213ENST00000566756 FBF1Q8TES7 1133 aa17.62■□□□□ 0.41
CMTM3-213ENST00000566756 FAXDC2Q96IV6 333 aa17.62■□□□□ 0.41
CMTM3-213ENST00000566756 MCEEQ96PE7 176 aa17.62■□□□□ 0.41
CMTM3-213ENST00000566756 SMC6Q96SB8 1091 aa17.62■□□□□ 0.41
CMTM3-213ENST00000566756 TINF2Q9BSI4 451 aa17.62■□□□□ 0.41
CMTM3-213ENST00000566756 ABHD16BQ9H3Z7 469 aa17.62■□□□□ 0.41
CMTM3-213ENST00000566756 TRABDQ9H4I3 376 aa17.62■□□□□ 0.41
CMTM3-213ENST00000566756 MLXIPLQ9NP71 852 aa17.62■□□□□ 0.41
CMTM3-213ENST00000566756 PI4K2BG5E9Z4 385 aa17.61■□□□□ 0.41
CMTM3-213ENST00000566756 TSHRP16473 764 aa17.61■□□□□ 0.41
CMTM3-213ENST00000566756 TAF1CQ15572 869 aaPredicted RBP17.61■□□□□ 0.41
CMTM3-213ENST00000566756 TAZQ16635 292 aa17.61■□□□□ 0.41
CMTM3-213ENST00000566756 EFHC2Q5JST6 749 aa17.61■□□□□ 0.41
CMTM3-213ENST00000566756 KAZNQ674X7 775 aa17.61■□□□□ 0.41
CMTM3-213ENST00000566756 PRCCQ92733 491 aaPredicted RBP17.61■□□□□ 0.41
CMTM3-213ENST00000566756 MRPL4Q9BYD3 311 aaKnown RBP17.61■□□□□ 0.41
CMTM3-213ENST00000566756 TXLNGQ9NUQ3 528 aa17.61■□□□□ 0.41
CMTM3-213ENST00000566756 CPA4Q9UI42 421 aa17.61■□□□□ 0.41
CMTM3-213ENST00000566756 FARP1Q9Y4F1 1045 aaPredicted RBP17.61■□□□□ 0.41
CMTM3-213ENST00000566756 TLL2Q9Y6L7 1015 aa17.61■□□□□ 0.41
CMTM3-213ENST00000566756 FOXO6A8MYZ6 492 aa17.6■□□□□ 0.41
CMTM3-213ENST00000566756 ZBTB42B2RXF5 422 aa17.6■□□□□ 0.41
CMTM3-213ENST00000566756 F8VP50 259 aa17.6■□□□□ 0.41
CMTM3-213ENST00000566756 WFS1O76024 890 aa17.6■□□□□ 0.41
CMTM3-213ENST00000566756 UNC5CO95185 931 aa17.6■□□□□ 0.41
CMTM3-213ENST00000566756 EDN1P05305 212 aa17.6■□□□□ 0.41
CMTM3-213ENST00000566756 POLR2BP30876 1174 aaKnown RBP17.6■□□□□ 0.41
CMTM3-213ENST00000566756 KCNJ2P63252 427 aa17.6■□□□□ 0.41
CMTM3-213ENST00000566756 ZKSCAN8Q15776 578 aaPredicted RBP17.6■□□□□ 0.41
CMTM3-213ENST00000566756 DUOXA2Q1HG44 320 aa17.6■□□□□ 0.41
Retrieved 100 of 20,778 RNA–protein pairs in 30.8 ms