RNA–Protein interactions for RNA: ENST00000566510.5

CDH1-209, Transcript of cadherin 1, humanhuman

TSL 5

Gene CDH1, Length 2,661 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDH1-209ENST00000566510 NBPF12Q5TAG4 269 aaPredicted RBP14.95□□□□□ -0.02
CDH1-209ENST00000566510 MICAL1Q8TDZ2 1067 aa14.95□□□□□ -0.02
CDH1-209ENST00000566510 CPT1BQ92523 772 aa14.95□□□□□ -0.02
CDH1-209ENST00000566510 ZNF668Q96K58 619 aaPredicted RBP14.95□□□□□ -0.02
CDH1-209ENST00000566510 TCRBV7S3A2A0A539 114 aa14.95□□□□□ -0.02
CDH1-209ENST00000566510 NEBLO76041 1014 aa14.95□□□□□ -0.02
CDH1-209ENST00000566510 ZWINTO95229 277 aa14.95□□□□□ -0.02
CDH1-209ENST00000566510 LSM8O95777 96 aaKnown RBP14.95□□□□□ -0.02
CDH1-209ENST00000566510 CD48P09326 243 aa14.95□□□□□ -0.02
CDH1-209ENST00000566510 T-ENOLP0DO92 83 aa14.95□□□□□ -0.02
CDH1-209ENST00000566510 TROVE2P10155 538 aaKnown RBP eCLIP14.95□□□□□ -0.02
CDH1-209ENST00000566510 SLC18A1P54219 525 aa14.95□□□□□ -0.02
CDH1-209ENST00000566510 NRLP54845 237 aa14.95□□□□□ -0.02
CDH1-209ENST00000566510 FSTL1Q12841 308 aa14.95□□□□□ -0.02
CDH1-209ENST00000566510 CAPSQ13938 189 aa14.95□□□□□ -0.02
CDH1-209ENST00000566510 PARP6Q2NL67 630 aa14.95□□□□□ -0.02
CDH1-209ENST00000566510 FAM71DQ8N9W8 422 aa14.95□□□□□ -0.02
CDH1-209ENST00000566510 KCTD6Q8NC69 237 aa14.95□□□□□ -0.02
CDH1-209ENST00000566510 FAM13CQ8NE31 585 aa14.95□□□□□ -0.02
CDH1-209ENST00000566510 HSPH1Q92598 858 aa14.95□□□□□ -0.02
CDH1-209ENST00000566510 NUDCD1Q96RS6 583 aa14.95□□□□□ -0.02
CDH1-209ENST00000566510 CALN1Q9BXU9 219 aa14.95□□□□□ -0.02
CDH1-209ENST00000566510 SLC5A4Q9NY91 659 aa14.95□□□□□ -0.02
CDH1-209ENST00000566510 SLC17A7Q9P2U7 560 aa14.95□□□□□ -0.02
CDH1-209ENST00000566510 XPO7Q9UIA9 1087 aaKnown RBP14.95□□□□□ -0.02
CDH1-209ENST00000566510 ZNF214Q9UL59 606 aaPredicted RBP14.95□□□□□ -0.02
CDH1-209ENST00000566510 ADGRA2Q96PE1 1338 aa14.94□□□□□ -0.02
CDH1-209ENST00000566510 KRT19P08727 400 aa14.94□□□□□ -0.02
CDH1-209ENST00000566510 IL1R2P27930 398 aa14.94□□□□□ -0.02
CDH1-209ENST00000566510 ARL2P36404 184 aa14.94□□□□□ -0.02
CDH1-209ENST00000566510 HIRAP54198 1017 aaPredicted RBP14.94□□□□□ -0.02
CDH1-209ENST00000566510 RAD23BP54727 409 aa14.94□□□□□ -0.02
CDH1-209ENST00000566510 TMEM132AQ24JP5 1023 aa14.94□□□□□ -0.02
CDH1-209ENST00000566510 EFHC2Q5JST6 749 aa14.94□□□□□ -0.02
CDH1-209ENST00000566510 CIAPIN1Q6FI81 312 aa14.94□□□□□ -0.02
CDH1-209ENST00000566510 RGS9BPQ6ZS82 235 aa14.94□□□□□ -0.02
CDH1-209ENST00000566510 RFX6Q8HWS3 928 aa14.94□□□□□ -0.02
CDH1-209ENST00000566510 JOSD2Q8TAC2 188 aa14.94□□□□□ -0.02
CDH1-209ENST00000566510 SLC35B2Q8TB61 432 aa14.94□□□□□ -0.02
CDH1-209ENST00000566510 NIF3L1Q9GZT8 377 aa14.94□□□□□ -0.02
CDH1-209ENST00000566510 ACAD9Q9H845 621 aa14.94□□□□□ -0.02
CDH1-209ENST00000566510 CHMP2BQ9UQN3 213 aa14.94□□□□□ -0.02
CDH1-209ENST00000566510 IKBKGQ9Y6K9 419 aa14.94□□□□□ -0.02
CDH1-209ENST00000566510 RPL22P35268 128 aaKnown RBP14.94□□□□□ -0.02
CDH1-209ENST00000566510 HADHQ16836 314 aaKnown RBP14.94□□□□□ -0.02
CDH1-209ENST00000566510 DUOXA2Q1HG44 320 aa14.94□□□□□ -0.02
CDH1-209ENST00000566510 ZNF699Q32M78 642 aa14.94□□□□□ -0.02
CDH1-209ENST00000566510 PLEKHG4Q58EX7 1191 aa14.94□□□□□ -0.02
CDH1-209ENST00000566510 DENND1BQ6P3S1 775 aa14.94□□□□□ -0.02
CDH1-209ENST00000566510 DPH6Q7L8W6 267 aa14.94□□□□□ -0.02
CDH1-209ENST00000566510 SAMD7Q7Z3H4 446 aa14.94□□□□□ -0.02
CDH1-209ENST00000566510 UNC45BQ8IWX7 931 aa14.94□□□□□ -0.02
CDH1-209ENST00000566510 PDIK1LQ8N165 341 aa14.94□□□□□ -0.02
CDH1-209ENST00000566510 MAB21L3Q8N8X9 362 aa14.94□□□□□ -0.02
CDH1-209ENST00000566510 RFWD2Q8NHY2 731 aa14.94□□□□□ -0.02
CDH1-209ENST00000566510 PRPF31Q8WWY3 499 aaKnown RBP14.94□□□□□ -0.02
CDH1-209ENST00000566510 SLC7A6OSQ96CW6 309 aaPredicted RBP14.94□□□□□ -0.02
CDH1-209ENST00000566510 ZBED3Q96IU2 234 aaPredicted RBP14.94□□□□□ -0.02
CDH1-209ENST00000566510 PICK1Q9NRD5 415 aa14.94□□□□□ -0.02
CDH1-209ENST00000566510 ZMYND8Q9ULU4 1186 aaPredicted RBP14.94□□□□□ -0.02
CDH1-209ENST00000566510 FARP1Q9Y4F1 1045 aaPredicted RBP14.94□□□□□ -0.02
CDH1-209ENST00000566510 MAFBQ9Y5Q3 323 aaPredicted RBP14.94□□□□□ -0.02
CDH1-209ENST00000566510 TCRBV5S1A1TA0A578 114 aa14.93□□□□□ -0.02
CDH1-209ENST00000566510 CFAP69A5D8W1 941 aa14.93□□□□□ -0.02
CDH1-209ENST00000566510 ENTPD5O75356 428 aa14.93□□□□□ -0.02
CDH1-209ENST00000566510 LRCH4O75427 683 aa14.93□□□□□ -0.02
CDH1-209ENST00000566510 PIGRP01833 764 aa14.93□□□□□ -0.02
CDH1-209ENST00000566510 RAP1GAPP47736 663 aa14.93□□□□□ -0.02
CDH1-209ENST00000566510 PSMC1P62191 440 aaKnown RBP14.93□□□□□ -0.02
CDH1-209ENST00000566510 TAP1Q03518 808 aa14.93□□□□□ -0.02
CDH1-209ENST00000566510 STXBP2Q15833 593 aa14.93□□□□□ -0.02
CDH1-209ENST00000566510 SGSM1Q2NKQ1 1148 aa14.93□□□□□ -0.02
CDH1-209ENST00000566510 CDR2LQ86X02 465 aaPredicted RBP14.93□□□□□ -0.02
CDH1-209ENST00000566510 WDR49Q8IV35 697 aa14.93□□□□□ -0.02
CDH1-209ENST00000566510 THNSL1Q8IYQ7 743 aa14.93□□□□□ -0.02
CDH1-209ENST00000566510 ZNF280CQ8ND82 737 aa14.93□□□□□ -0.02
CDH1-209ENST00000566510 INPP5DQ92835 1189 aa14.93□□□□□ -0.02
CDH1-209ENST00000566510 WRNIP1Q96S55 665 aa14.93□□□□□ -0.02
CDH1-209ENST00000566510 PDGFDQ9GZP0 370 aaPredicted RBP14.93□□□□□ -0.02
CDH1-209ENST00000566510 MANSC1Q9H8J5 431 aa14.93□□□□□ -0.02
CDH1-209ENST00000566510 RNPEPL1Q9HAU8 725 aa14.93□□□□□ -0.02
CDH1-209ENST00000566510 PCNTO95613 3336 aa14.93□□□□□ -0.02
CDH1-209ENST00000566510 NDC80O14777 642 aa14.93□□□□□ -0.02
CDH1-209ENST00000566510 ADCY3O60266 1144 aa14.93□□□□□ -0.02
CDH1-209ENST00000566510 MT-ND3P03897 115 aa14.93□□□□□ -0.02
CDH1-209ENST00000566510 KRT7P08729 469 aa14.93□□□□□ -0.02
CDH1-209ENST00000566510 DPEP1P16444 411 aa14.93□□□□□ -0.02
CDH1-209ENST00000566510 GM2AP17900 193 aa14.93□□□□□ -0.02
CDH1-209ENST00000566510 EIF4BP23588 611 aaKnown RBP14.93□□□□□ -0.02
CDH1-209ENST00000566510 MARK3P27448 753 aa14.93□□□□□ -0.02
CDH1-209ENST00000566510 CNTN2Q02246 1040 aa14.93□□□□□ -0.02
CDH1-209ENST00000566510 ZBTB16Q05516 673 aa14.93□□□□□ -0.02
CDH1-209ENST00000566510 KLHL38Q2WGJ6 581 aa14.93□□□□□ -0.02
CDH1-209ENST00000566510 PPP1R15BQ5SWA1 713 aa14.93□□□□□ -0.02
CDH1-209ENST00000566510 BRSK2Q8IWQ3 736 aa14.93□□□□□ -0.02
CDH1-209ENST00000566510 TTC8Q8TAM2 541 aa14.93□□□□□ -0.02
CDH1-209ENST00000566510 LBHD1Q9BQE6 289 aaPredicted RBP14.93□□□□□ -0.02
CDH1-209ENST00000566510 TEX13BQ9BXU2 312 aa14.93□□□□□ -0.02
CDH1-209ENST00000566510 TRIM6Q9C030 488 aaPredicted RBP14.93□□□□□ -0.02
CDH1-209ENST00000566510 PPCSQ9HAB8 311 aa14.93□□□□□ -0.02
Retrieved 100 of 20,778 RNA–protein pairs in 19.7 ms