RNA–Protein interactions for RNA: ENST00000565922.1

CMTM3-211, Transcript of CKLF like MARVEL transmembrane domain containing 3, humanhuman

TSL 1 (best) BASIC

Gene CMTM3, Length 615 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CMTM3-211ENST00000565922 PDGFBP01127 241 aaPredicted RBP21.19■□□□□ 0.98
CMTM3-211ENST00000565922 HLA-DRAP01903 254 aa21.19■□□□□ 0.98
CMTM3-211ENST00000565922 TRIM49P0CI25 452 aa21.19■□□□□ 0.98
CMTM3-211ENST00000565922 TRIM49CP0CI26 452 aa21.19■□□□□ 0.98
CMTM3-211ENST00000565922 CCNE1P24864 410 aa21.19■□□□□ 0.98
CMTM3-211ENST00000565922 ANXA13P27216 316 aa21.19■□□□□ 0.98
CMTM3-211ENST00000565922 CDR1P51861 262 aa21.19■□□□□ 0.98
CMTM3-211ENST00000565922 CYP27A1Q02318 531 aa21.19■□□□□ 0.98
CMTM3-211ENST00000565922 C1orf220Q5T0J3 134 aa21.19■□□□□ 0.98
CMTM3-211ENST00000565922 KRT39Q6A163 491 aa21.19■□□□□ 0.98
CMTM3-211ENST00000565922 ASTLQ6HA08 431 aaPredicted RBP21.19■□□□□ 0.98
CMTM3-211ENST00000565922 TANGO2Q6ICL3 276 aa21.19■□□□□ 0.98
CMTM3-211ENST00000565922 GAREM2Q75VX8 874 aa21.19■□□□□ 0.98
CMTM3-211ENST00000565922 ST13P5Q8NFI4 369 aaPredicted RBP21.19■□□□□ 0.98
CMTM3-211ENST00000565922 PCED1BQ96HM7 432 aa21.19■□□□□ 0.98
CMTM3-211ENST00000565922 DNAI2Q9GZS0 605 aa21.19■□□□□ 0.98
CMTM3-211ENST00000565922 EHD2Q9NZN4 543 aa21.19■□□□□ 0.98
CMTM3-211ENST00000565922 CA14Q9ULX7 337 aa21.19■□□□□ 0.98
CMTM3-211ENST00000565922 ATP8B3O60423 1300 aa21.19■□□□□ 0.98
CMTM3-211ENST00000565922 ANAPC1Q9H1A4 1944 aa21.19■□□□□ 0.98
CMTM3-211ENST00000565922 TICRRQ7Z2Z1 1910 aa21.18■□□□□ 0.98
CMTM3-211ENST00000565922 SOBPA7XYQ1 873 aa21.18■□□□□ 0.98
CMTM3-211ENST00000565922 TRIM66O15016 1216 aa21.18■□□□□ 0.98
CMTM3-211ENST00000565922 ATP2C2O75185 946 aa21.18■□□□□ 0.98
CMTM3-211ENST00000565922 PTPN1P18031 435 aaKnown RBP21.18■□□□□ 0.98
CMTM3-211ENST00000565922 FCARP24071 287 aa21.18■□□□□ 0.98
CMTM3-211ENST00000565922 DDX6P26196 483 aaKnown RBP eCLIP21.18■□□□□ 0.98
CMTM3-211ENST00000565922 AVPR2P30518 371 aa21.18■□□□□ 0.98
CMTM3-211ENST00000565922 GCLMP48507 274 aa21.18■□□□□ 0.98
CMTM3-211ENST00000565922 MCCD1P59942 119 aaPredicted RBP21.18■□□□□ 0.98
CMTM3-211ENST00000565922 GPC5P78333 572 aa21.18■□□□□ 0.98
CMTM3-211ENST00000565922 MDH1BQ5I0G3 518 aa21.18■□□□□ 0.98
CMTM3-211ENST00000565922 GPR158Q5T848 1215 aa21.18■□□□□ 0.98
CMTM3-211ENST00000565922 SCN4BQ8IWT1 228 aa21.18■□□□□ 0.98
CMTM3-211ENST00000565922 ZC3H3Q8IXZ2 948 aaKnown RBP21.18■□□□□ 0.98
CMTM3-211ENST00000565922 TRIML1Q8N9V2 468 aa21.18■□□□□ 0.98
CMTM3-211ENST00000565922 B3GALNT2Q8NCR0 500 aa21.18■□□□□ 0.98
CMTM3-211ENST00000565922 FLCNQ8NFG4 579 aa21.18■□□□□ 0.98
CMTM3-211ENST00000565922 TRMT2BQ96GJ1 504 aaKnown RBP21.18■□□□□ 0.98
CMTM3-211ENST00000565922 ZSWIM3Q96MP5 696 aa21.18■□□□□ 0.98
CMTM3-211ENST00000565922 ELOVL4Q9GZR5 314 aa21.18■□□□□ 0.98
CMTM3-211ENST00000565922 TASP1Q9H6P5 420 aa21.18■□□□□ 0.98
CMTM3-211ENST00000565922 SMYD3Q9H7B4 428 aa21.18■□□□□ 0.98
CMTM3-211ENST00000565922 BICDL2A1A5D9 508 aa21.17■□□□□ 0.98
CMTM3-211ENST00000565922 NOL4O94818 638 aa21.17■□□□□ 0.98
CMTM3-211ENST00000565922 PSMC3P17980 439 aa21.17■□□□□ 0.98
CMTM3-211ENST00000565922 WEE1P30291 646 aa21.17■□□□□ 0.98
CMTM3-211ENST00000565922 GRIK1P39086 918 aa21.17■□□□□ 0.98
CMTM3-211ENST00000565922 MXI1P50539 228 aa21.17■□□□□ 0.98
CMTM3-211ENST00000565922 NOP14P78316 857 aaKnown RBP21.17■□□□□ 0.98
CMTM3-211ENST00000565922 DDR2Q16832 855 aa21.17■□□□□ 0.98
CMTM3-211ENST00000565922 ANKRD40Q6AI12 368 aa21.17■□□□□ 0.98
CMTM3-211ENST00000565922 FOXR2Q6PJQ5 311 aa21.17■□□□□ 0.98
CMTM3-211ENST00000565922 SCARA5Q6ZMJ2 495 aa21.17■□□□□ 0.98
CMTM3-211ENST00000565922 MRPS31Q92665 395 aaKnown RBP21.17■□□□□ 0.98
CMTM3-211ENST00000565922 DNASE1L2Q92874 299 aa21.17■□□□□ 0.98
CMTM3-211ENST00000565922 IRF7Q92985 503 aa21.17■□□□□ 0.98
CMTM3-211ENST00000565922 SPATA17Q96L03 361 aa21.17■□□□□ 0.98
CMTM3-211ENST00000565922 TRMT61BQ9BVS5 477 aaKnown RBP21.17■□□□□ 0.98
CMTM3-211ENST00000565922 MMRN2Q9H8L6 949 aa21.17■□□□□ 0.98
CMTM3-211ENST00000565922 IL21Q9HBE4 155 aa21.17■□□□□ 0.98
CMTM3-211ENST00000565922 RAPGEFL1Q9UHV5 662 aa21.17■□□□□ 0.98
CMTM3-211ENST00000565922 MAGED2Q9UNF1 606 aaPredicted RBP21.17■□□□□ 0.98
CMTM3-211ENST00000565922 KRBA1A5PL33 1030 aa21.16■□□□□ 0.98
CMTM3-211ENST00000565922 SLC38A8A6NNN8 435 aa21.16■□□□□ 0.98
CMTM3-211ENST00000565922 STK25O00506 426 aa21.16■□□□□ 0.98
CMTM3-211ENST00000565922 DPYSL4O14531 572 aa21.16■□□□□ 0.98
CMTM3-211ENST00000565922 HMGA1P17096 107 aaKnown RBP21.16■□□□□ 0.98
CMTM3-211ENST00000565922 BDNFP23560 247 aa21.16■□□□□ 0.98
CMTM3-211ENST00000565922 GPR15P49685 360 aa21.16■□□□□ 0.98
CMTM3-211ENST00000565922 VCPP55072 806 aaKnown RBP21.16■□□□□ 0.98
CMTM3-211ENST00000565922 NLRP12P59046 1061 aa21.16■□□□□ 0.98
CMTM3-211ENST00000565922 PRKCQQ04759 706 aa21.16■□□□□ 0.98
CMTM3-211ENST00000565922 PPP3CAQ08209 521 aa21.16■□□□□ 0.98
CMTM3-211ENST00000565922 MORC3Q14149 939 aa21.16■□□□□ 0.98
CMTM3-211ENST00000565922 CCDC142Q17RM4 750 aa21.16■□□□□ 0.98
CMTM3-211ENST00000565922 TCERG1LQ5VWI1 586 aa21.16■□□□□ 0.98
CMTM3-211ENST00000565922 ISM2Q6H9L7 571 aa21.16■□□□□ 0.98
CMTM3-211ENST00000565922 PHLDB3Q6NSJ2 640 aa21.16■□□□□ 0.98
CMTM3-211ENST00000565922 POTEHQ6S545 545 aa21.16■□□□□ 0.98
CMTM3-211ENST00000565922 UNC93AQ86WB7 457 aa21.16■□□□□ 0.98
CMTM3-211ENST00000565922 EEF2KMTQ96G04 330 aa21.16■□□□□ 0.98
CMTM3-211ENST00000565922 FAXDC2Q96IV6 333 aa21.16■□□□□ 0.98
CMTM3-211ENST00000565922 MYRFLQ96LU7 910 aa21.16■□□□□ 0.98
CMTM3-211ENST00000565922 CEP63Q96MT8 703 aa21.16■□□□□ 0.98
CMTM3-211ENST00000565922 BRD9Q9H8M2 597 aa21.16■□□□□ 0.98
CMTM3-211ENST00000565922 METTL14Q9HCE5 456 aaKnown RBP21.16■□□□□ 0.98
CMTM3-211ENST00000565922 OBP2AQ9NY56 170 aa21.16■□□□□ 0.98
CMTM3-211ENST00000565922 HELZP42694 1942 aaKnown RBP21.16■□□□□ 0.98
CMTM3-211ENST00000565922 TRIM49BA6NDI0 452 aa21.15■□□□□ 0.98
CMTM3-211ENST00000565922 NRG2O14511 850 aaPredicted RBP21.15■□□□□ 0.98
CMTM3-211ENST00000565922 AOC1P19801 751 aa21.15■□□□□ 0.98
CMTM3-211ENST00000565922 RAP1GAPP47736 663 aa21.15■□□□□ 0.98
CMTM3-211ENST00000565922 CDH8P55286 799 aa21.15■□□□□ 0.98
CMTM3-211ENST00000565922 CYP4F8P98187 520 aa21.15■□□□□ 0.98
CMTM3-211ENST00000565922 MLF2Q15773 248 aaPredicted RBP21.15■□□□□ 0.98
CMTM3-211ENST00000565922 DCAF17Q5H9S7 520 aaPredicted RBP21.15■□□□□ 0.98
CMTM3-211ENST00000565922 CWF19L1Q69YN2 538 aaKnown RBP21.15■□□□□ 0.98
CMTM3-211ENST00000565922 VITQ6UXI7 678 aa21.15■□□□□ 0.98
CMTM3-211ENST00000565922 ARID3BQ8IVW6 561 aaPredicted RBP21.15■□□□□ 0.98
Retrieved 100 of 20,778 RNA–protein pairs in 29 ms