RNA–Protein interactions for RNA: ENST00000565582.5

FANCA-218, Transcript of FA complementation group A, humanhuman

TSL 3

Gene FANCA, Length 812 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FANCA-218ENST00000565582 HPDLQ96IR7 371 aa12.8□□□□□ -0.36
FANCA-218ENST00000565582 SLC22A12Q96S37 553 aa12.8□□□□□ -0.36
FANCA-218ENST00000565582 SYT15Q9BQS2 421 aa12.8□□□□□ -0.36
FANCA-218ENST00000565582 ACBD6Q9BR61 282 aa12.8□□□□□ -0.36
FANCA-218ENST00000565582 EBF3Q9H4W6 596 aa12.8□□□□□ -0.36
FANCA-218ENST00000565582 HPS4Q9NQG7 708 aa12.8□□□□□ -0.36
FANCA-218ENST00000565582 AGPAT3Q9NRZ7 376 aa12.8□□□□□ -0.36
FANCA-218ENST00000565582 GKN1Q9NS71 199 aa12.8□□□□□ -0.36
FANCA-218ENST00000565582 GABRDO14764 452 aa12.79□□□□□ -0.36
FANCA-218ENST00000565582 EIF3DO15371 548 aaKnown RBP eCLIP12.79□□□□□ -0.36
FANCA-218ENST00000565582 POLR2DO15514 142 aaKnown RBP12.79□□□□□ -0.36
FANCA-218ENST00000565582 NOL4O94818 638 aa12.79□□□□□ -0.36
FANCA-218ENST00000565582 F13A1P00488 732 aa12.79□□□□□ -0.36
FANCA-218ENST00000565582 CSH1P0DML2 217 aa12.79□□□□□ -0.36
FANCA-218ENST00000565582 CSH2P0DML3 217 aa12.79□□□□□ -0.36
FANCA-218ENST00000565582 WEE1P30291 646 aa12.79□□□□□ -0.36
FANCA-218ENST00000565582 CXCL12P48061 93 aa12.79□□□□□ -0.36
FANCA-218ENST00000565582 MLLT6P55198 1093 aaPredicted RBP12.79□□□□□ -0.36
FANCA-218ENST00000565582 RPL10AP62906 217 aaKnown RBP12.79□□□□□ -0.36
FANCA-218ENST00000565582 PLCB2Q00722 1185 aa12.79□□□□□ -0.36
FANCA-218ENST00000565582 MYO1EQ12965 1108 aa12.79□□□□□ -0.36
FANCA-218ENST00000565582 SNRNP35Q16560 246 aaKnown RBP12.79□□□□□ -0.36
FANCA-218ENST00000565582 ITPRIPL2Q3MIP1 535 aa12.79□□□□□ -0.36
FANCA-218ENST00000565582 PKN3Q6P5Z2 889 aa12.79□□□□□ -0.36
FANCA-218ENST00000565582 PRR23BQ6ZRT6 265 aa12.79□□□□□ -0.36
FANCA-218ENST00000565582 HSCBQ8IWL3 235 aa12.79□□□□□ -0.36
FANCA-218ENST00000565582 SPEM1Q8N4L4 309 aa12.79□□□□□ -0.36
FANCA-218ENST00000565582 IQUBQ8NA54 791 aa12.79□□□□□ -0.36
FANCA-218ENST00000565582 SCFD1Q8WVM8 642 aa12.79□□□□□ -0.36
FANCA-218ENST00000565582 MRPS31Q92665 395 aaKnown RBP12.79□□□□□ -0.36
FANCA-218ENST00000565582 CCDC127Q96BQ5 260 aa12.79□□□□□ -0.36
FANCA-218ENST00000565582 IER2Q9BTL4 223 aa12.79□□□□□ -0.36
FANCA-218ENST00000565582 CUEDC2Q9H467 287 aa12.79□□□□□ -0.36
FANCA-218ENST00000565582 ABCB6Q9NP58 842 aa12.79□□□□□ -0.36
FANCA-218ENST00000565582 CRTAC1Q9NQ79 661 aa12.79□□□□□ -0.36
FANCA-218ENST00000565582 R3HCC1Q9Y3T6 440 aaKnown RBP12.79□□□□□ -0.36
FANCA-218ENST00000565582 NME7Q9Y5B8 376 aa12.79□□□□□ -0.36
FANCA-218ENST00000565582 DENND4CQ5VZ89 1909 aa12.79□□□□□ -0.36
FANCA-218ENST00000565582 K7ESF4 209 aa12.78□□□□□ -0.36
FANCA-218ENST00000565582 KIAA0391O15091 583 aaKnown RBP12.78□□□□□ -0.36
FANCA-218ENST00000565582 CKMP06732 381 aa12.78□□□□□ -0.36
FANCA-218ENST00000565582 HSP90AA1P07900 732 aaKnown RBP12.78□□□□□ -0.36
FANCA-218ENST00000565582 PDGFRBP09619 1106 aa12.78□□□□□ -0.36
FANCA-218ENST00000565582 ZSCAN22P10073 491 aaPredicted RBP12.78□□□□□ -0.36
FANCA-218ENST00000565582 PCSK1P29120 753 aa12.78□□□□□ -0.36
FANCA-218ENST00000565582 AFMP43652 599 aa12.78□□□□□ -0.36
FANCA-218ENST00000565582 ME1P48163 572 aa12.78□□□□□ -0.36
FANCA-218ENST00000565582 LHX1P48742 406 aa12.78□□□□□ -0.36
FANCA-218ENST00000565582 CUL4BQ13620 913 aa12.78□□□□□ -0.36
FANCA-218ENST00000565582 CCINQ13939 588 aa12.78□□□□□ -0.36
FANCA-218ENST00000565582 PPP2R5DQ14738 602 aa12.78□□□□□ -0.36
FANCA-218ENST00000565582 DUOXA2Q1HG44 320 aa12.78□□□□□ -0.36
FANCA-218ENST00000565582 UNC13DQ70J99 1090 aa12.78□□□□□ -0.36
FANCA-218ENST00000565582 TRAPPC11Q7Z392 1133 aa12.78□□□□□ -0.36
FANCA-218ENST00000565582 MON1AQ86VX9 555 aa12.78□□□□□ -0.36
FANCA-218ENST00000565582 WDR49Q8IV35 697 aa12.78□□□□□ -0.36
FANCA-218ENST00000565582 ZNF507Q8TCN5 953 aa12.78□□□□□ -0.36
FANCA-218ENST00000565582 SNX21Q969T3 373 aa12.78□□□□□ -0.36
FANCA-218ENST00000565582 CHAMP1Q96JM3 812 aa12.78□□□□□ -0.36
FANCA-218ENST00000565582 CYP2S1Q96SQ9 504 aa12.78□□□□□ -0.36
FANCA-218ENST00000565582 MMS19Q96T76 1030 aa12.78□□□□□ -0.36
FANCA-218ENST00000565582 C7orf25Q9BPX7 421 aa12.78□□□□□ -0.36
FANCA-218ENST00000565582 FAM83CQ9BQN1 747 aa12.78□□□□□ -0.36
FANCA-218ENST00000565582 MRPL45Q9BRJ2 306 aaKnown RBP12.78□□□□□ -0.36
FANCA-218ENST00000565582 FAM126AQ9BYI3 521 aaPredicted RBP12.78□□□□□ -0.36
FANCA-218ENST00000565582 LRRC27Q9C0I9 530 aa12.78□□□□□ -0.36
FANCA-218ENST00000565582 GZF1Q9H116 711 aaPredicted RBP12.78□□□□□ -0.36
FANCA-218ENST00000565582 SLC39A2Q9NP94 309 aa12.78□□□□□ -0.36
FANCA-218ENST00000565582 PARD6AQ9NPB6 346 aa12.78□□□□□ -0.36
FANCA-218ENST00000565582 TDP1Q9NUW8 608 aa12.78□□□□□ -0.36
FANCA-218ENST00000565582 POLR3BQ9NW08 1133 aaPredicted RBP12.78□□□□□ -0.36
FANCA-218ENST00000565582 THG1LQ9NWX6 298 aaKnown RBP12.78□□□□□ -0.36
FANCA-218ENST00000565582 USP18Q9UMW8 372 aa12.78□□□□□ -0.36
FANCA-218ENST00000565582 PCDHA7Q9UN72 937 aa12.78□□□□□ -0.36
FANCA-218ENST00000565582 MED19A0JLT2 244 aaPredicted RBP12.77□□□□□ -0.37
FANCA-218ENST00000565582 C2orf78A6NCI8 922 aa12.77□□□□□ -0.37
FANCA-218ENST00000565582 TNNI1P19237 187 aa12.77□□□□□ -0.37
FANCA-218ENST00000565582 BDNFP23560 247 aa12.77□□□□□ -0.37
FANCA-218ENST00000565582 DDX6P26196 483 aaKnown RBP eCLIP12.77□□□□□ -0.37
FANCA-218ENST00000565582 PXNP49023 591 aaPredicted RBP12.77□□□□□ -0.37
FANCA-218ENST00000565582 CASP4P49662 377 aa12.77□□□□□ -0.37
FANCA-218ENST00000565582 USP46P62068 366 aa12.77□□□□□ -0.37
FANCA-218ENST00000565582 AMPD3Q01432 767 aa12.77□□□□□ -0.37
FANCA-218ENST00000565582 CYP27A1Q02318 531 aa12.77□□□□□ -0.37
FANCA-218ENST00000565582 CYP24A1Q07973 514 aa12.77□□□□□ -0.37
FANCA-218ENST00000565582 EHHADHQ08426 723 aa12.77□□□□□ -0.37
FANCA-218ENST00000565582 RUNX3Q13761 415 aa12.77□□□□□ -0.37
FANCA-218ENST00000565582 MTF1Q14872 753 aa12.77□□□□□ -0.37
FANCA-218ENST00000565582 RSPO4Q2I0M5 234 aaPredicted RBP12.77□□□□□ -0.37
FANCA-218ENST00000565582 CFAP221Q4G0U5 840 aa12.77□□□□□ -0.37
FANCA-218ENST00000565582 MDH1BQ5I0G3 518 aa12.77□□□□□ -0.37
FANCA-218ENST00000565582 DGKKQ5KSL6 1271 aa12.77□□□□□ -0.37
FANCA-218ENST00000565582 FSTL4Q6MZW2 842 aa12.77□□□□□ -0.37
FANCA-218ENST00000565582 CNNM4Q6P4Q7 775 aa12.77□□□□□ -0.37
FANCA-218ENST00000565582 FAM171BQ6P995 826 aa12.77□□□□□ -0.37
FANCA-218ENST00000565582 C1orf228Q6PIY5 440 aa12.77□□□□□ -0.37
FANCA-218ENST00000565582 MAMSTRQ6ZN01 415 aa12.77□□□□□ -0.37
FANCA-218ENST00000565582 ERMP1Q7Z2K6 904 aa12.77□□□□□ -0.37
FANCA-218ENST00000565582 DGLUCYQ7Z3D6 616 aa12.77□□□□□ -0.37
FANCA-218ENST00000565582 LIMS2Q7Z4I7 341 aa12.77□□□□□ -0.37
Retrieved 100 of 20,778 RNA–protein pairs in 37.4 ms