RNA–Protein interactions for RNA: ENST00000565452.1

VPS9D1-205, Transcript of VPS9 domain containing 1, humanhuman

TSL 3

Gene VPS9D1, Length 178 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS9D1-205ENST00000565452 CCT2P78371 535 aaKnown RBP9.8□□□□□ -0.84
VPS9D1-205ENST00000565452 FAM160A1Q05DH4 1040 aa9.8□□□□□ -0.84
VPS9D1-205ENST00000565452 SCRN1Q12765 414 aa9.8□□□□□ -0.84
VPS9D1-205ENST00000565452 SUZ12Q15022 739 aaKnown RBP9.8□□□□□ -0.84
VPS9D1-205ENST00000565452 ADCK5Q3MIX3 580 aa9.8□□□□□ -0.84
VPS9D1-205ENST00000565452 ZNF568Q3ZCX4 644 aa9.8□□□□□ -0.84
VPS9D1-205ENST00000565452 SLC39A12Q504Y0 691 aa9.8□□□□□ -0.84
VPS9D1-205ENST00000565452 TAF1BQ53T94 588 aaPredicted RBP9.8□□□□□ -0.84
VPS9D1-205ENST00000565452 WDR45BQ5MNZ6 344 aa9.8□□□□□ -0.84
VPS9D1-205ENST00000565452 PADI6Q6TGC4 694 aa9.8□□□□□ -0.84
VPS9D1-205ENST00000565452 RUFY3Q7L099 469 aa9.8□□□□□ -0.84
VPS9D1-205ENST00000565452 TMEM150AQ86TG1 271 aa9.8□□□□□ -0.84
VPS9D1-205ENST00000565452 POTEDQ86YR6 584 aa9.8□□□□□ -0.84
VPS9D1-205ENST00000565452 TRIML1Q8N9V2 468 aa9.8□□□□□ -0.84
VPS9D1-205ENST00000565452 IL17RCQ8NAC3 791 aa9.8□□□□□ -0.84
VPS9D1-205ENST00000565452 RHBDD1Q8TEB9 315 aa9.8□□□□□ -0.84
VPS9D1-205ENST00000565452 WBP1Q96G27 269 aa9.8□□□□□ -0.84
VPS9D1-205ENST00000565452 CDT1Q9H211 546 aa9.8□□□□□ -0.84
VPS9D1-205ENST00000565452 LINC00597Q9H2U6 94 aa9.8□□□□□ -0.84
VPS9D1-205ENST00000565452 PRDM16Q9HAZ2 1276 aa9.8□□□□□ -0.84
VPS9D1-205ENST00000565452 ZSWIM6Q9HCJ5 1215 aa9.8□□□□□ -0.84
VPS9D1-205ENST00000565452 PTPRHQ9HD43 1115 aa9.8□□□□□ -0.84
VPS9D1-205ENST00000565452 CYP46A1Q9Y6A2 500 aa9.8□□□□□ -0.84
VPS9D1-205ENST00000565452 WNT6Q9Y6F9 365 aa9.8□□□□□ -0.84
VPS9D1-205ENST00000565452 EML5Q05BV3 1969 aa9.8□□□□□ -0.84
VPS9D1-205ENST00000565452 A0A0A0MRY4 1105 aa9.79□□□□□ -0.84
VPS9D1-205ENST00000565452 TRAV19A0A0A6YYK7 116 aa9.79□□□□□ -0.84
VPS9D1-205ENST00000565452 GOLGA8CPA6NN73 597 aa9.79□□□□□ -0.84
VPS9D1-205ENST00000565452 NDUFS2O75306 463 aa9.79□□□□□ -0.84
VPS9D1-205ENST00000565452 WISP1O95388 367 aa9.79□□□□□ -0.84
VPS9D1-205ENST00000565452 APODP05090 189 aa9.79□□□□□ -0.84
VPS9D1-205ENST00000565452 ZNF883P0CG24 379 aa9.79□□□□□ -0.84
VPS9D1-205ENST00000565452 CSH1P0DML2 217 aa9.79□□□□□ -0.84
VPS9D1-205ENST00000565452 CSH2P0DML3 217 aa9.79□□□□□ -0.84
VPS9D1-205ENST00000565452 ATF6P18850 670 aa9.79□□□□□ -0.84
VPS9D1-205ENST00000565452 NMT1P30419 496 aaKnown RBP9.79□□□□□ -0.84
VPS9D1-205ENST00000565452 LRPAP1P30533 357 aa9.79□□□□□ -0.84
VPS9D1-205ENST00000565452 OPRD1P41143 372 aa9.79□□□□□ -0.84
VPS9D1-205ENST00000565452 SRSF1Q07955 248 aaKnown RBP eCLIP9.79□□□□□ -0.84
VPS9D1-205ENST00000565452 NPY5RQ15761 445 aa9.79□□□□□ -0.84
VPS9D1-205ENST00000565452 MARCH9Q86YJ5 346 aa9.79□□□□□ -0.84
VPS9D1-205ENST00000565452 THEM5Q8N1Q8 247 aa9.79□□□□□ -0.84
VPS9D1-205ENST00000565452 RIN3Q8TB24 985 aa9.79□□□□□ -0.84
VPS9D1-205ENST00000565452 SPPL2BQ8TCT7 592 aa9.79□□□□□ -0.84
VPS9D1-205ENST00000565452 KCNV2Q8TDN2 545 aa9.79□□□□□ -0.84
VPS9D1-205ENST00000565452 BAP1Q92560 729 aa9.79□□□□□ -0.84
VPS9D1-205ENST00000565452 KIFAP3Q92845 792 aa9.79□□□□□ -0.84
VPS9D1-205ENST00000565452 FOXJ1Q92949 421 aa9.79□□□□□ -0.84
VPS9D1-205ENST00000565452 ZNF419Q96HQ0 510 aaPredicted RBP9.79□□□□□ -0.84
VPS9D1-205ENST00000565452 JAKMIP1Q96N16 626 aaKnown RBP9.79□□□□□ -0.84
VPS9D1-205ENST00000565452 CYP2S1Q96SQ9 504 aa9.79□□□□□ -0.84
VPS9D1-205ENST00000565452 PNKPQ96T60 521 aa9.79□□□□□ -0.84
VPS9D1-205ENST00000565452 MRPL4Q9BYD3 311 aaKnown RBP9.79□□□□□ -0.84
VPS9D1-205ENST00000565452 TMEM206Q9H813 350 aa9.79□□□□□ -0.84
VPS9D1-205ENST00000565452 PLEKHA5Q9HAU0 1116 aa9.79□□□□□ -0.84
VPS9D1-205ENST00000565452 UXTQ9UBK9 157 aaPredicted RBP9.79□□□□□ -0.84
VPS9D1-205ENST00000565452 DACH1Q9UI36 760 aa9.79□□□□□ -0.84
VPS9D1-205ENST00000565452 MAGED2Q9UNF1 606 aaPredicted RBP9.79□□□□□ -0.84
VPS9D1-205ENST00000565452 SHROOM3Q8TF72 1996 aa9.79□□□□□ -0.84
VPS9D1-205ENST00000565452 PHLPP2Q6ZVD8 1323 aa9.79□□□□□ -0.84
VPS9D1-205ENST00000565452 PI4KAP42356 2102 aa9.79□□□□□ -0.84
VPS9D1-205ENST00000565452 NID2Q14112 1375 aa9.78□□□□□ -0.84
VPS9D1-205ENST00000565452 FAM149AA5PLN7 773 aa9.78□□□□□ -0.84
VPS9D1-205ENST00000565452 ARHGEF35A5YM69 484 aa9.78□□□□□ -0.84
VPS9D1-205ENST00000565452 B8ZZF3 427 aa9.78□□□□□ -0.84
VPS9D1-205ENST00000565452 ERVH48-1M5A8F1 160 aa9.78□□□□□ -0.84
VPS9D1-205ENST00000565452 CPLX1O14810 134 aa9.78□□□□□ -0.84
VPS9D1-205ENST00000565452 XPOTO43592 962 aaKnown RBP9.78□□□□□ -0.84
VPS9D1-205ENST00000565452 DKK1O94907 266 aa9.78□□□□□ -0.84
VPS9D1-205ENST00000565452 CKMP06732 381 aa9.78□□□□□ -0.84
VPS9D1-205ENST00000565452 HAPLN1P10915 354 aaPredicted RBP9.78□□□□□ -0.84
VPS9D1-205ENST00000565452 ODC1P11926 461 aa9.78□□□□□ -0.84
VPS9D1-205ENST00000565452 HMGA1P17096 107 aaKnown RBP9.78□□□□□ -0.84
VPS9D1-205ENST00000565452 XBP1P17861 261 aa9.78□□□□□ -0.84
VPS9D1-205ENST00000565452 CYP3A5P20815 502 aa9.78□□□□□ -0.84
VPS9D1-205ENST00000565452 RPS6KB1P23443 525 aa9.78□□□□□ -0.84
VPS9D1-205ENST00000565452 PDIA3P30101 505 aaKnown RBP9.78□□□□□ -0.84
VPS9D1-205ENST00000565452 GRIA2P42262 883 aa9.78□□□□□ -0.84
VPS9D1-205ENST00000565452 TXKP42681 527 aa9.78□□□□□ -0.84
VPS9D1-205ENST00000565452 AARSP49588 968 aaKnown RBP eCLIP9.78□□□□□ -0.84
VPS9D1-205ENST00000565452 ANKRD1Q15327 319 aa9.78□□□□□ -0.84
VPS9D1-205ENST00000565452 SMAD1Q15797 465 aaKnown RBP9.78□□□□□ -0.84
VPS9D1-205ENST00000565452 ZNF77Q15935 545 aa9.78□□□□□ -0.84
VPS9D1-205ENST00000565452 CALCRLQ16602 461 aa9.78□□□□□ -0.84
VPS9D1-205ENST00000565452 SLC10A6Q3KNW5 377 aa9.78□□□□□ -0.84
VPS9D1-205ENST00000565452 EMC10Q5UCC4 262 aa9.78□□□□□ -0.84
VPS9D1-205ENST00000565452 CPLX2Q6PUV4 134 aaKnown RBP9.78□□□□□ -0.84
VPS9D1-205ENST00000565452 IL27RAQ6UWB1 636 aa9.78□□□□□ -0.84
VPS9D1-205ENST00000565452 DBX2Q6ZNG2 339 aa9.78□□□□□ -0.84
VPS9D1-205ENST00000565452 PIK3AP1Q6ZUJ8 805 aa9.78□□□□□ -0.84
VPS9D1-205ENST00000565452 NUDT18Q6ZVK8 323 aa9.78□□□□□ -0.84
VPS9D1-205ENST00000565452 TRMT11Q7Z4G4 463 aaKnown RBP9.78□□□□□ -0.84
VPS9D1-205ENST00000565452 METTL23Q86XA0 190 aa9.78□□□□□ -0.84
VPS9D1-205ENST00000565452 SLC41A1Q8IVJ1 513 aa9.78□□□□□ -0.84
VPS9D1-205ENST00000565452 FAM181AQ8N9Y4 354 aa9.78□□□□□ -0.84
VPS9D1-205ENST00000565452 ENGASEQ8NFI3 743 aa9.78□□□□□ -0.84
VPS9D1-205ENST00000565452 SPATA18Q8TC71 538 aa9.78□□□□□ -0.84
VPS9D1-205ENST00000565452 SH3RF2Q8TEC5 729 aa9.78□□□□□ -0.84
VPS9D1-205ENST00000565452 DRC1Q96MC2 740 aa9.78□□□□□ -0.84
VPS9D1-205ENST00000565452 HSPA12BQ96MM6 686 aa9.78□□□□□ -0.84
Retrieved 100 of 20,778 RNA–protein pairs in 37.8 ms