RNA–Protein interactions for RNA: ENST00000564581.1

SUB1P3-201, Transcript of SUB1 homolog, transcriptional regulator pseudogene 3, humanhuman

BASIC

Gene SUB1P3, Length 315 nt, Biotype processed pseudogene.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SUB1P3-201ENST00000564581 SSX2IPQ9Y2D8 614 aa3.22□□□□□ -1.89
SUB1P3-201ENST00000564581 UTP18Q9Y5J1 556 aaKnown RBP eCLIP3.22□□□□□ -1.89
SUB1P3-201ENST00000564581 ADAMTSL3P82987 1691 aa3.22□□□□□ -1.89
SUB1P3-201ENST00000564581 SHROOM2Q13796 1616 aa3.22□□□□□ -1.89
SUB1P3-201ENST00000564581 GLI2P10070 1586 aa3.21□□□□□ -1.89
SUB1P3-201ENST00000564581 H3BUI4 141 aa3.21□□□□□ -1.9
SUB1P3-201ENST00000564581 DNAJB5O75953 348 aa3.21□□□□□ -1.9
SUB1P3-201ENST00000564581 JTBO76095 146 aa3.21□□□□□ -1.9
SUB1P3-201ENST00000564581 GNAI2P04899 355 aa3.21□□□□□ -1.9
SUB1P3-201ENST00000564581 FESP07332 822 aa3.21□□□□□ -1.9
SUB1P3-201ENST00000564581 IL6RP08887 468 aaPredicted RBP3.21□□□□□ -1.9
SUB1P3-201ENST00000564581 PIM1P11309 404 aaPredicted RBP3.21□□□□□ -1.9
SUB1P3-201ENST00000564581 TYRP14679 529 aa3.21□□□□□ -1.9
SUB1P3-201ENST00000564581 SFPQP23246 707 aaKnown RBP eCLIP3.21□□□□□ -1.9
SUB1P3-201ENST00000564581 ALDH9A1P49189 494 aa3.21□□□□□ -1.9
SUB1P3-201ENST00000564581 EEFSECP57772 596 aaKnown RBP3.21□□□□□ -1.9
SUB1P3-201ENST00000564581 CYP4F2P78329 520 aa3.21□□□□□ -1.9
SUB1P3-201ENST00000564581 SLC44A4Q53GD3 710 aa3.21□□□□□ -1.9
SUB1P3-201ENST00000564581 PCID2Q5JVF3 399 aa3.21□□□□□ -1.9
SUB1P3-201ENST00000564581 RNF187Q5TA31 235 aaPredicted RBP3.21□□□□□ -1.9
SUB1P3-201ENST00000564581 FAM160B1Q5W0V3 765 aa3.21□□□□□ -1.9
SUB1P3-201ENST00000564581 SLC18B1Q6NT16 456 aa3.21□□□□□ -1.9
SUB1P3-201ENST00000564581 USP45Q70EL2 814 aa3.21□□□□□ -1.9
SUB1P3-201ENST00000564581 SLC29A4Q7RTT9 530 aa3.21□□□□□ -1.9
SUB1P3-201ENST00000564581 DTX2Q86UW9 622 aa3.21□□□□□ -1.9
SUB1P3-201ENST00000564581 SLC13A1Q9BZW2 595 aa3.21□□□□□ -1.9
SUB1P3-201ENST00000564581 SPRTNQ9H040 489 aaPredicted RBP3.21□□□□□ -1.9
SUB1P3-201ENST00000564581 WDCPQ9H6R7 721 aa3.21□□□□□ -1.9
SUB1P3-201ENST00000564581 PNPOQ9NVS9 261 aa3.21□□□□□ -1.9
SUB1P3-201ENST00000564581 HESX1Q9UBX0 185 aa3.21□□□□□ -1.9
SUB1P3-201ENST00000564581 FEZ2Q9UHY8 353 aaPredicted RBP3.21□□□□□ -1.9
SUB1P3-201ENST00000564581 ZDHHC8Q9ULC8 765 aa3.21□□□□□ -1.9
SUB1P3-201ENST00000564581 PCDHA6Q9UN73 950 aa3.21□□□□□ -1.9
SUB1P3-201ENST00000564581 PTPRMP28827 1452 aa3.21□□□□□ -1.9
SUB1P3-201ENST00000564581 SNAPC4Q5SXM2 1469 aa3.21□□□□□ -1.9
SUB1P3-201ENST00000564581 CEP170Q5SW79 1584 aa3.21□□□□□ -1.9
SUB1P3-201ENST00000564581 DNMBPQ6XZF7 1577 aa3.21□□□□□ -1.9
SUB1P3-201ENST00000564581 ZNF521Q96K83 1311 aa3.2□□□□□ -1.9
SUB1P3-201ENST00000564581 PRRT4C9JH25 899 aa3.2□□□□□ -1.9
SUB1P3-201ENST00000564581 hCG_1984214I3L0E3 225 aa3.2□□□□□ -1.9
SUB1P3-201ENST00000564581 QSOX1O00391 747 aa3.2□□□□□ -1.9
SUB1P3-201ENST00000564581 IGSF3O75054 1194 aa3.2□□□□□ -1.9
SUB1P3-201ENST00000564581 SOAT2O75908 522 aa3.2□□□□□ -1.9
SUB1P3-201ENST00000564581 NXPH3O95157 252 aa3.2□□□□□ -1.9
SUB1P3-201ENST00000564581 UNC5CO95185 931 aa3.2□□□□□ -1.9
SUB1P3-201ENST00000564581 PDE8BO95263 885 aa3.2□□□□□ -1.9
SUB1P3-201ENST00000564581 POU2F2P09086 479 aa3.2□□□□□ -1.9
SUB1P3-201ENST00000564581 FTH1P19P0C7X4 201 aa3.2□□□□□ -1.9
SUB1P3-201ENST00000564581 PDE1AP54750 535 aa3.2□□□□□ -1.9
SUB1P3-201ENST00000564581 PLS1Q14651 629 aa3.2□□□□□ -1.9
SUB1P3-201ENST00000564581 CCDC157Q569K6 752 aa3.2□□□□□ -1.9
SUB1P3-201ENST00000564581 ZNF618Q5T7W0 954 aa3.2□□□□□ -1.9
SUB1P3-201ENST00000564581 ARHGAP40Q5TG30 622 aa3.2□□□□□ -1.9
SUB1P3-201ENST00000564581 ICE2Q659A1 982 aa3.2□□□□□ -1.9
SUB1P3-201ENST00000564581 NEK8Q86SG6 692 aa3.2□□□□□ -1.9
SUB1P3-201ENST00000564581 CHSY1Q86X52 802 aa3.2□□□□□ -1.9
SUB1P3-201ENST00000564581 PNLDC1Q8NA58 520 aaKnown RBP3.2□□□□□ -1.9
SUB1P3-201ENST00000564581 ATG4AQ8WYN0 398 aa3.2□□□□□ -1.9
SUB1P3-201ENST00000564581 GLG1Q92896 1179 aa3.2□□□□□ -1.9
SUB1P3-201ENST00000564581 RPL36ALQ969Q0 106 aaKnown RBP3.2□□□□□ -1.9
SUB1P3-201ENST00000564581 ZNF48Q96MX3 618 aaPredicted RBP3.2□□□□□ -1.9
SUB1P3-201ENST00000564581 GTPBP4Q9BZE4 634 aaKnown RBP3.2□□□□□ -1.9
SUB1P3-201ENST00000564581 SIK2Q9H0K1 926 aa3.2□□□□□ -1.9
SUB1P3-201ENST00000564581 BHMT2Q9H2M3 363 aa3.2□□□□□ -1.9
SUB1P3-201ENST00000564581 ARMT1Q9H993 441 aa3.2□□□□□ -1.9
SUB1P3-201ENST00000564581 DUSP22Q9NRW4 184 aa3.2□□□□□ -1.9
SUB1P3-201ENST00000564581 BTBD3Q9Y2F9 522 aa3.2□□□□□ -1.9
SUB1P3-201ENST00000564581 MRPS17Q9Y2R5 130 aaKnown RBP3.2□□□□□ -1.9
SUB1P3-201ENST00000564581 PPP6CO00743 305 aa3.19□□□□□ -1.9
SUB1P3-201ENST00000564581 SLC16A6O15403 523 aa3.19□□□□□ -1.9
SUB1P3-201ENST00000564581 SLC16A3O15427 465 aaKnown RBP3.19□□□□□ -1.9
SUB1P3-201ENST00000564581 SNUPNO95149 360 aaKnown RBP3.19□□□□□ -1.9
SUB1P3-201ENST00000564581 ARIH2O95376 493 aa3.19□□□□□ -1.9
SUB1P3-201ENST00000564581 IL33O95760 270 aa3.19□□□□□ -1.9
SUB1P3-201ENST00000564581 ARHGAP25P42331 645 aa3.19□□□□□ -1.9
SUB1P3-201ENST00000564581 RECQLP46063 649 aaPredicted RBP3.19□□□□□ -1.9
SUB1P3-201ENST00000564581 SOX8P57073 446 aa3.19□□□□□ -1.9
SUB1P3-201ENST00000564581 TUBA4AP68366 448 aa3.19□□□□□ -1.9
SUB1P3-201ENST00000564581 NKX6-1P78426 367 aaPredicted RBP3.19□□□□□ -1.9
SUB1P3-201ENST00000564581 PGS1Q32NB8 556 aa3.19□□□□□ -1.9
SUB1P3-201ENST00000564581 LONRF3Q496Y0 759 aa3.19□□□□□ -1.9
SUB1P3-201ENST00000564581 AARS2Q5JTZ9 985 aaKnown RBP3.19□□□□□ -1.9
SUB1P3-201ENST00000564581 RGS7BPQ6MZT1 257 aaPredicted RBP3.19□□□□□ -1.9
SUB1P3-201ENST00000564581 ANKRD16Q6P6B7 361 aa3.19□□□□□ -1.9
SUB1P3-201ENST00000564581 LAYNQ6UX15 382 aa3.19□□□□□ -1.9
SUB1P3-201ENST00000564581 ZNF280BQ86YH2 543 aa3.19□□□□□ -1.9
SUB1P3-201ENST00000564581 LRRC71Q8N4P6 559 aa3.19□□□□□ -1.9
SUB1P3-201ENST00000564581 CYP2W1Q8TAV3 490 aa3.19□□□□□ -1.9
SUB1P3-201ENST00000564581 TBC1D5Q92609 795 aa3.19□□□□□ -1.9
SUB1P3-201ENST00000564581 R3HDM4Q96D70 268 aa3.19□□□□□ -1.9
SUB1P3-201ENST00000564581 C5orf34Q96MH7 638 aa3.19□□□□□ -1.9
SUB1P3-201ENST00000564581 NELL2Q99435 816 aa3.19□□□□□ -1.9
SUB1P3-201ENST00000564581 TMX1Q9H3N1 280 aa3.19□□□□□ -1.9
SUB1P3-201ENST00000564581 NRIP3Q9NQ35 241 aa3.19□□□□□ -1.9
SUB1P3-201ENST00000564581 PDGFCQ9NRA1 345 aa3.19□□□□□ -1.9
SUB1P3-201ENST00000564581 NDRG4Q9ULP0 352 aaKnown RBP3.19□□□□□ -1.9
SUB1P3-201ENST00000564581 IGF2BP2Q9Y6M1 599 aaKnown RBP eCLIP3.19□□□□□ -1.9
SUB1P3-201ENST00000564581 GRIN2BQ13224 1484 aa3.19□□□□□ -1.9
SUB1P3-201ENST00000564581 STRCQ7RTU9 1775 aa3.18□□□□□ -1.9
SUB1P3-201ENST00000564581 TEX14Q8IWB6 1497 aa3.18□□□□□ -1.9
Retrieved 100 of 20,778 RNA–protein pairs in 38.8 ms