RNA–Protein interactions for RNA: ENST00000564390.1

AC009041.3-201, humanhuman

TSL 5 BASIC

Gene AC009041.3, Length 879 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AC009041.3-201ENST00000564390 IRF7Q92985 503 aa27.04■■□□□ 1.92
AC009041.3-201ENST00000564390 LRRC3BQ96PB8 259 aa27.04■■□□□ 1.92
AC009041.3-201ENST00000564390 SLC38A8A6NNN8 435 aa27.03■■□□□ 1.92
AC009041.3-201ENST00000564390 DPYSL4O14531 572 aa27.03■■□□□ 1.92
AC009041.3-201ENST00000564390 F11P03951 625 aa27.03■■□□□ 1.92
AC009041.3-201ENST00000564390 CSH1P0DML2 217 aa27.03■■□□□ 1.92
AC009041.3-201ENST00000564390 CSH2P0DML3 217 aa27.03■■□□□ 1.92
AC009041.3-201ENST00000564390 CYP27A1Q02318 531 aa27.03■■□□□ 1.92
AC009041.3-201ENST00000564390 PNOCQ13519 176 aa27.03■■□□□ 1.92
AC009041.3-201ENST00000564390 ZNF699Q32M78 642 aa27.03■■□□□ 1.92
AC009041.3-201ENST00000564390 MDH1BQ5I0G3 518 aa27.03■■□□□ 1.92
AC009041.3-201ENST00000564390 SCARA5Q6ZMJ2 495 aa27.03■■□□□ 1.92
AC009041.3-201ENST00000564390 C4orf50Q6ZRC1 276 aa27.03■■□□□ 1.92
AC009041.3-201ENST00000564390 SYAP1Q96A49 352 aaPredicted RBP27.03■■□□□ 1.92
AC009041.3-201ENST00000564390 E2F7Q96AV8 911 aa27.03■■□□□ 1.92
AC009041.3-201ENST00000564390 FUBP3Q96I24 572 aaKnown RBP eCLIP27.03■■□□□ 1.92
AC009041.3-201ENST00000564390 SLC46A2Q9BY10 475 aa27.03■■□□□ 1.92
AC009041.3-201ENST00000564390 DPEP3Q9H4B8 488 aa27.03■■□□□ 1.92
AC009041.3-201ENST00000564390 SMYD3Q9H7B4 428 aa27.03■■□□□ 1.92
AC009041.3-201ENST00000564390 TRAF3IP3Q9Y228 551 aa27.03■■□□□ 1.92
AC009041.3-201ENST00000564390 CACNA1HO95180 2353 aa27.02■■□□□ 1.92
AC009041.3-201ENST00000564390 DENND4CQ5VZ89 1909 aa27.02■■□□□ 1.92
AC009041.3-201ENST00000564390 TACC1O75410 805 aa27.02■■□□□ 1.92
AC009041.3-201ENST00000564390 KIF20AO95235 890 aa27.02■■□□□ 1.92
AC009041.3-201ENST00000564390 VNN1O95497 513 aa27.02■■□□□ 1.92
AC009041.3-201ENST00000564390 GNL1P36915 607 aaPredicted RBP27.02■■□□□ 1.92
AC009041.3-201ENST00000564390 RAP1GAPP47736 663 aa27.02■■□□□ 1.92
AC009041.3-201ENST00000564390 CLDN10P78369 228 aa27.02■■□□□ 1.92
AC009041.3-201ENST00000564390 NCOA4Q13772 614 aa27.02■■□□□ 1.92
AC009041.3-201ENST00000564390 KCNB1Q14721 858 aa27.02■■□□□ 1.92
AC009041.3-201ENST00000564390 SMYD4Q8IYR2 804 aaPredicted RBP27.02■■□□□ 1.92
AC009041.3-201ENST00000564390 FMR1NBQ8N0W7 255 aaPredicted RBP27.02■■□□□ 1.92
AC009041.3-201ENST00000564390 TMEM174Q8WUU8 243 aa27.02■■□□□ 1.92
AC009041.3-201ENST00000564390 ZFYVE19Q96K21 471 aa27.02■■□□□ 1.92
AC009041.3-201ENST00000564390 MAGEC2Q9UBF1 373 aaPredicted RBP27.02■■□□□ 1.92
AC009041.3-201ENST00000564390 NDRG2Q9UN36 371 aaKnown RBP27.02■■□□□ 1.92
AC009041.3-201ENST00000564390 FRMD4BQ9Y2L6 1034 aa27.02■■□□□ 1.92
AC009041.3-201ENST00000564390 PIAS3Q9Y6X2 628 aa27.02■■□□□ 1.92
AC009041.3-201ENST00000564390 PTPRDP23468 1912 aa27.01■■□□□ 1.91
AC009041.3-201ENST00000564390 GOLGA6L4A6NEF3 574 aa27.01■■□□□ 1.91
AC009041.3-201ENST00000564390 ARNTLO00327 626 aa27.01■■□□□ 1.91
AC009041.3-201ENST00000564390 TADA3O75528 432 aa27.01■■□□□ 1.91
AC009041.3-201ENST00000564390 NOL4O94818 638 aa27.01■■□□□ 1.91
AC009041.3-201ENST00000564390 STAU1O95793 577 aaKnown RBP27.01■■□□□ 1.91
AC009041.3-201ENST00000564390 C4BPAP04003 597 aaKnown RBP27.01■■□□□ 1.91
AC009041.3-201ENST00000564390 BDNFP23560 247 aa27.01■■□□□ 1.91
AC009041.3-201ENST00000564390 NR2F2P24468 414 aa27.01■■□□□ 1.91
AC009041.3-201ENST00000564390 ATICP31939 592 aa27.01■■□□□ 1.91
AC009041.3-201ENST00000564390 MAGEA11P43364 429 aa27.01■■□□□ 1.91
AC009041.3-201ENST00000564390 FCHO2Q0JRZ9 810 aa27.01■■□□□ 1.91
AC009041.3-201ENST00000564390 TXNDC8Q6A555 127 aa27.01■■□□□ 1.91
AC009041.3-201ENST00000564390 ZNF852Q6ZMS4 543 aa27.01■■□□□ 1.91
AC009041.3-201ENST00000564390 FRMD5Q7Z6J6 570 aa27.01■■□□□ 1.91
AC009041.3-201ENST00000564390 MAB21L3Q8N8X9 362 aa27.01■■□□□ 1.91
AC009041.3-201ENST00000564390 PCED1BQ96HM7 432 aa27.01■■□□□ 1.91
AC009041.3-201ENST00000564390 PATJQ8NI35 1801 aa27.01■■□□□ 1.91
AC009041.3-201ENST00000564390 AP3M2P53677 418 aa27■■□□□ 1.91
AC009041.3-201ENST00000564390 GUF1Q8N442 669 aaKnown RBP27■■□□□ 1.91
AC009041.3-201ENST00000564390 MYCBPAPQ8TBZ2 947 aa27■■□□□ 1.91
AC009041.3-201ENST00000564390 BCO2Q9BYV7 579 aa27■■□□□ 1.91
AC009041.3-201ENST00000564390 CHADO15335 359 aa26.99■■□□□ 1.91
AC009041.3-201ENST00000564390 SOX9P48436 509 aa26.99■■□□□ 1.91
AC009041.3-201ENST00000564390 CDH8P55286 799 aa26.99■■□□□ 1.91
AC009041.3-201ENST00000564390 MAPRE1Q15691 268 aaKnown RBP26.99■■□□□ 1.91
AC009041.3-201ENST00000564390 ZNF667Q5HYK9 610 aa26.99■■□□□ 1.91
AC009041.3-201ENST00000564390 C1orf220Q5T0J3 134 aa26.99■■□□□ 1.91
AC009041.3-201ENST00000564390 CMTM8Q8IZV2 173 aa26.99■■□□□ 1.91
AC009041.3-201ENST00000564390 TTC8Q8TAM2 541 aa26.99■■□□□ 1.91
AC009041.3-201ENST00000564390 TMC2Q8TDI7 906 aa26.99■■□□□ 1.91
AC009041.3-201ENST00000564390 CSGALNACT1Q8TDX6 532 aa26.99■■□□□ 1.91
AC009041.3-201ENST00000564390 MRPS31Q92665 395 aaKnown RBP26.99■■□□□ 1.91
AC009041.3-201ENST00000564390 TRMT2BQ96GJ1 504 aaKnown RBP26.99■■□□□ 1.91
AC009041.3-201ENST00000564390 OSBPL6Q9BZF3 934 aa26.99■■□□□ 1.91
AC009041.3-201ENST00000564390 TRPV5Q9NQA5 729 aa26.99■■□□□ 1.91
AC009041.3-201ENST00000564390 CCL26Q9Y258 94 aa26.99■■□□□ 1.91
AC009041.3-201ENST00000564390 PIEZO1Q92508 2521 aa26.98■■□□□ 1.91
AC009041.3-201ENST00000564390 KIF26AQ9ULI4 1882 aaPredicted RBP26.98■■□□□ 1.91
AC009041.3-201ENST00000564390 A8MXQ7 604 aa26.98■■□□□ 1.91
AC009041.3-201ENST00000564390 AKAP3O75969 853 aa26.98■■□□□ 1.91
AC009041.3-201ENST00000564390 TRIM49P0CI25 452 aa26.98■■□□□ 1.91
AC009041.3-201ENST00000564390 TRIM49CP0CI26 452 aa26.98■■□□□ 1.91
AC009041.3-201ENST00000564390 GRIK1P39086 918 aa26.98■■□□□ 1.91
AC009041.3-201ENST00000564390 NBL1P41271 181 aa26.98■■□□□ 1.91
AC009041.3-201ENST00000564390 ZACNQ401N2 412 aa26.98■■□□□ 1.91
AC009041.3-201ENST00000564390 C1orf210Q8IVY1 113 aa26.98■■□□□ 1.91
AC009041.3-201ENST00000564390 BPIFB1Q8TDL5 484 aa26.98■■□□□ 1.91
AC009041.3-201ENST00000564390 ERCC4Q92889 916 aaPredicted RBP26.98■■□□□ 1.91
AC009041.3-201ENST00000564390 CCDC34Q96HJ3 373 aa26.98■■□□□ 1.91
AC009041.3-201ENST00000564390 SDCBP2Q9H190 292 aa26.98■■□□□ 1.91
AC009041.3-201ENST00000564390 VRTNQ9H8Y1 702 aa26.98■■□□□ 1.91
AC009041.3-201ENST00000564390 TRPC7Q9HCX4 862 aa26.98■■□□□ 1.91
AC009041.3-201ENST00000564390 UTP3Q9NQZ2 479 aaKnown RBP eCLIP26.98■■□□□ 1.91
AC009041.3-201ENST00000564390 SPATA6Q9NWH7 488 aaPredicted RBP26.98■■□□□ 1.91
AC009041.3-201ENST00000564390 OBP2AQ9NY56 170 aa26.98■■□□□ 1.91
AC009041.3-201ENST00000564390 UXTQ9UBK9 157 aaPredicted RBP26.98■■□□□ 1.91
AC009041.3-201ENST00000564390 MRPS17Q9Y2R5 130 aaKnown RBP26.98■■□□□ 1.91
AC009041.3-201ENST00000564390 GREB1Q4ZG55 1949 aa26.97■■□□□ 1.91
AC009041.3-201ENST00000564390 GFRA3O60609 400 aa26.97■■□□□ 1.91
AC009041.3-201ENST00000564390 PTPN1P18031 435 aaKnown RBP26.97■■□□□ 1.91
AC009041.3-201ENST00000564390 WEE1P30291 646 aa26.97■■□□□ 1.91
Retrieved 100 of 20,778 RNA–protein pairs in 36.6 ms