RNA–Protein interactions for RNA: ENST00000563739.5

SF3B3-204, Transcript of splicing factor 3b subunit 3, humanhuman

TSL 2

Gene SF3B3, Length 1,105 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3B3-204ENST00000563739 SAFBQ15424 915 aaKnown RBP eCLIP11.22□□□□□ -0.61
SF3B3-204ENST00000563739 MGAT5BQ3V5L5 792 aa11.22□□□□□ -0.61
SF3B3-204ENST00000563739 FBXO43Q4G163 708 aa11.22□□□□□ -0.61
SF3B3-204ENST00000563739 ARSHQ5FYA8 562 aa11.22□□□□□ -0.61
SF3B3-204ENST00000563739 HYIQ5T013 277 aa11.22□□□□□ -0.61
SF3B3-204ENST00000563739 CYP2U1Q7Z449 544 aa11.22□□□□□ -0.61
SF3B3-204ENST00000563739 MON1AQ86VX9 555 aa11.22□□□□□ -0.61
SF3B3-204ENST00000563739 PROSER1Q86XN7 944 aa11.22□□□□□ -0.61
SF3B3-204ENST00000563739 EFCAB13Q8IY85 973 aa11.22□□□□□ -0.61
SF3B3-204ENST00000563739 RLN3Q8WXF3 142 aa11.22□□□□□ -0.61
SF3B3-204ENST00000563739 CD101Q93033 1021 aa11.22□□□□□ -0.61
SF3B3-204ENST00000563739 DRC1Q96MC2 740 aa11.22□□□□□ -0.61
SF3B3-204ENST00000563739 TCHPQ9BT92 498 aa11.22□□□□□ -0.61
SF3B3-204ENST00000563739 CCSER1Q9C0I3 900 aa11.22□□□□□ -0.61
SF3B3-204ENST00000563739 KIF9Q9HAQ2 790 aa11.22□□□□□ -0.61
SF3B3-204ENST00000563739 LRWD1Q9UFC0 647 aa11.22□□□□□ -0.61
SF3B3-204ENST00000563739 CPSF3Q9UKF6 684 aaKnown RBP11.22□□□□□ -0.61
SF3B3-204ENST00000563739 RBM19Q9Y4C8 960 aaKnown RBP11.22□□□□□ -0.61
SF3B3-204ENST00000563739 TENM4Q6N022 2769 aa11.22□□□□□ -0.61
SF3B3-204ENST00000563739 KHNYNO15037 678 aaKnown RBP11.21□□□□□ -0.61
SF3B3-204ENST00000563739 NOL4O94818 638 aa11.21□□□□□ -0.61
SF3B3-204ENST00000563739 PLS3P13797 630 aa11.21□□□□□ -0.61
SF3B3-204ENST00000563739 SLC12A3P55017 1021 aa11.21□□□□□ -0.61
SF3B3-204ENST00000563739 PDGFRLQ15198 375 aa11.21□□□□□ -0.61
SF3B3-204ENST00000563739 MAP7D1Q3KQU3 841 aa11.21□□□□□ -0.61
SF3B3-204ENST00000563739 WSCD1Q658N2 575 aa11.21□□□□□ -0.61
SF3B3-204ENST00000563739 ANO7Q6IWH7 933 aa11.21□□□□□ -0.61
SF3B3-204ENST00000563739 RAB44Q7Z6P3 723 aaPredicted RBP11.21□□□□□ -0.61
SF3B3-204ENST00000563739 USP37Q86T82 979 aa11.21□□□□□ -0.61
SF3B3-204ENST00000563739 C12orf40Q86WS4 652 aa11.21□□□□□ -0.61
SF3B3-204ENST00000563739 OR2I1PQ8NGU4 316 aa11.21□□□□□ -0.61
SF3B3-204ENST00000563739 CXorf38Q8TB03 319 aa11.21□□□□□ -0.61
SF3B3-204ENST00000563739 SPPL2BQ8TCT7 592 aa11.21□□□□□ -0.61
SF3B3-204ENST00000563739 OSCP1Q8WVF1 389 aa11.21□□□□□ -0.61
SF3B3-204ENST00000563739 ACDQ96AP0 544 aa11.21□□□□□ -0.61
SF3B3-204ENST00000563739 CYP2S1Q96SQ9 504 aa11.21□□□□□ -0.61
SF3B3-204ENST00000563739 LINC00597Q9H2U6 94 aa11.21□□□□□ -0.61
SF3B3-204ENST00000563739 C17orf75Q9HAS0 396 aa11.21□□□□□ -0.61
SF3B3-204ENST00000563739 THG1LQ9NWX6 298 aaKnown RBP11.21□□□□□ -0.61
SF3B3-204ENST00000563739 HCN2Q9UL51 889 aa11.21□□□□□ -0.61
SF3B3-204ENST00000563739 MMP17Q9ULZ9 603 aa11.21□□□□□ -0.61
SF3B3-204ENST00000563739 PCDHB6Q9Y5E3 794 aa11.21□□□□□ -0.61
SF3B3-204ENST00000563739 A0A0B4J269 797 aa11.2□□□□□ -0.62
SF3B3-204ENST00000563739 C2orf78A6NCI8 922 aa11.2□□□□□ -0.62
SF3B3-204ENST00000563739 UPK3BL1B0FP48 263 aa11.2□□□□□ -0.62
SF3B3-204ENST00000563739 UPK3BL2E5RIL1 263 aa11.2□□□□□ -0.62
SF3B3-204ENST00000563739 OGTO15294 1046 aa11.2□□□□□ -0.62
SF3B3-204ENST00000563739 CLDN3O15551 220 aa11.2□□□□□ -0.62
SF3B3-204ENST00000563739 TCF3P15923 654 aa11.2□□□□□ -0.62
SF3B3-204ENST00000563739 ENGP17813 658 aa11.2□□□□□ -0.62
SF3B3-204ENST00000563739 GBP1P32455 592 aa11.2□□□□□ -0.62
SF3B3-204ENST00000563739 TUFMP49411 452 aaKnown RBP11.2□□□□□ -0.62
SF3B3-204ENST00000563739 FAM160A1Q05DH4 1040 aa11.2□□□□□ -0.62
SF3B3-204ENST00000563739 PPP2R3AQ06190 1150 aa11.2□□□□□ -0.62
SF3B3-204ENST00000563739 PDIA5Q14554 519 aa11.2□□□□□ -0.62
SF3B3-204ENST00000563739 UAP1L1Q3KQV9 507 aa11.2□□□□□ -0.62
SF3B3-204ENST00000563739 TRIM61Q5EBN2 209 aa11.2□□□□□ -0.62
SF3B3-204ENST00000563739 ARMCX6Q7L4S7 300 aa11.2□□□□□ -0.62
SF3B3-204ENST00000563739 OSTM1Q86WC4 334 aa11.2□□□□□ -0.62
SF3B3-204ENST00000563739 LURAP1LQ8IV03 231 aa11.2□□□□□ -0.62
SF3B3-204ENST00000563739 PHTF2Q8N3S3 785 aa11.2□□□□□ -0.62
SF3B3-204ENST00000563739 TSTD1Q8NFU3 115 aa11.2□□□□□ -0.62
SF3B3-204ENST00000563739 PIGKQ92643 395 aa11.2□□□□□ -0.62
SF3B3-204ENST00000563739 FOXP1Q9H334 677 aaPredicted RBP11.2□□□□□ -0.62
SF3B3-204ENST00000563739 CD248Q9HCU0 757 aa11.2□□□□□ -0.62
SF3B3-204ENST00000563739 ZDHHC4Q9NPG8 344 aa11.2□□□□□ -0.62
SF3B3-204ENST00000563739 ABI2Q9NYB9 513 aaPredicted RBP11.2□□□□□ -0.62
SF3B3-204ENST00000563739 MSANTD3-TMEFF1A0A0A6YYJ0 341 aa11.19□□□□□ -0.62
SF3B3-204ENST00000563739 ANKRD63C9JTQ0 380 aa11.19□□□□□ -0.62
SF3B3-204ENST00000563739 SGK1O00141 431 aa11.19□□□□□ -0.62
SF3B3-204ENST00000563739 ADAM23O75077 832 aa11.19□□□□□ -0.62
SF3B3-204ENST00000563739 GJB3O75712 270 aa11.19□□□□□ -0.62
SF3B3-204ENST00000563739 CYP17A1P05093 508 aa11.19□□□□□ -0.62
SF3B3-204ENST00000563739 CD59P13987 128 aa11.19□□□□□ -0.62
SF3B3-204ENST00000563739 DDX6P26196 483 aaKnown RBP eCLIP11.19□□□□□ -0.622e-6■□□□□ 10.5
SF3B3-204ENST00000563739 AVPR1AP37288 418 aa11.19□□□□□ -0.62
SF3B3-204ENST00000563739 KIR2DL1P43626 348 aaPredicted RBP11.19□□□□□ -0.62
SF3B3-204ENST00000563739 MAPK8P45983 427 aa11.19□□□□□ -0.62
SF3B3-204ENST00000563739 DHPSP49366 369 aaPredicted RBP11.19□□□□□ -0.62
SF3B3-204ENST00000563739 SEC13P55735 322 aa11.19□□□□□ -0.62
SF3B3-204ENST00000563739 BFSP1Q12934 665 aa11.19□□□□□ -0.62
SF3B3-204ENST00000563739 VEPH1Q14D04 833 aa11.19□□□□□ -0.62
SF3B3-204ENST00000563739 PTPAQ15257 358 aa11.19□□□□□ -0.62
SF3B3-204ENST00000563739 CRY1Q16526 586 aa11.19□□□□□ -0.62
SF3B3-204ENST00000563739 DDR2Q16832 855 aa11.19□□□□□ -0.62
SF3B3-204ENST00000563739 TMEM119Q4V9L6 283 aa11.19□□□□□ -0.62
SF3B3-204ENST00000563739 C19orf48Q6RUI8 117 aa11.19□□□□□ -0.62
SF3B3-204ENST00000563739 CRELD2Q6UXH1 353 aaPredicted RBP11.19□□□□□ -0.62
SF3B3-204ENST00000563739 TMEFF1Q8IYR6 380 aa11.19□□□□□ -0.62
SF3B3-204ENST00000563739 CHCHD4Q8N4Q1 142 aa11.19□□□□□ -0.62
SF3B3-204ENST00000563739 CPA6Q8N4T0 437 aa11.19□□□□□ -0.62
SF3B3-204ENST00000563739 CCDC33Q8N5R6 958 aa11.19□□□□□ -0.62
SF3B3-204ENST00000563739 IL17RCQ8NAC3 791 aa11.19□□□□□ -0.62
SF3B3-204ENST00000563739 ZSWIM2Q8NEG5 633 aa11.19□□□□□ -0.62
SF3B3-204ENST00000563739 LEO1Q8WVC0 666 aaPredicted RBP11.19□□□□□ -0.62
SF3B3-204ENST00000563739 TRMT2BQ96GJ1 504 aaKnown RBP11.19□□□□□ -0.62
SF3B3-204ENST00000563739 MYRFLQ96LU7 910 aa11.19□□□□□ -0.62
SF3B3-204ENST00000563739 PI4K2AQ9BTU6 479 aa11.19□□□□□ -0.62
SF3B3-204ENST00000563739 CAPN10Q9HC96 672 aa11.19□□□□□ -0.62
SF3B3-204ENST00000563739 PILRBQ9UKJ0 227 aa11.19□□□□□ -0.62
Retrieved 100 of 20,778 RNA–protein pairs in 39.3 ms