RNA–Protein interactions for RNA: ENST00000563590.2

CCDC187-201, Transcript of coiled-coil domain containing 187, humanhuman

TSL 1 (best)

Gene CCDC187, Length 3,543 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC187-201ENST00000563590 PTK6Q13882 451 aa13.33□□□□□ -0.28
CCDC187-201ENST00000563590 MTERF2Q49AM1 385 aa13.33□□□□□ -0.28
CCDC187-201ENST00000563590 TCHHL1Q5QJ38 904 aaPredicted RBP13.33□□□□□ -0.28
CCDC187-201ENST00000563590 PPM1NQ8N819 430 aa13.33□□□□□ -0.28
CCDC187-201ENST00000563590 RSAD2Q8WXG1 361 aa13.33□□□□□ -0.28
CCDC187-201ENST00000563590 TUBB6Q9BUF5 446 aa13.33□□□□□ -0.28
CCDC187-201ENST00000563590 LRRIQ4A6NIV6 560 aa13.33□□□□□ -0.28
CCDC187-201ENST00000563590 CFLARO15519 480 aa13.33□□□□□ -0.28
CCDC187-201ENST00000563590 JAG1P78504 1218 aa13.33□□□□□ -0.28
CCDC187-201ENST00000563590 SLC25A3Q00325 362 aa13.33□□□□□ -0.28
CCDC187-201ENST00000563590 Q4G0T1 1027 aa13.33□□□□□ -0.28
CCDC187-201ENST00000563590 CIAPIN1Q6FI81 312 aa13.33□□□□□ -0.28
CCDC187-201ENST00000563590 PADI6Q6TGC4 694 aa13.33□□□□□ -0.28
CCDC187-201ENST00000563590 SCARA5Q6ZMJ2 495 aa13.33□□□□□ -0.28
CCDC187-201ENST00000563590 ZC3H8Q8N5P1 291 aaKnown RBP eCLIP13.33□□□□□ -0.28
CCDC187-201ENST00000563590 ENDOVQ8N8Q3 282 aaKnown RBP13.33□□□□□ -0.28
CCDC187-201ENST00000563590 GLIS1Q8NBF1 620 aa13.33□□□□□ -0.28
CCDC187-201ENST00000563590 GADD45GIP1Q8TAE8 222 aaPredicted RBP13.33□□□□□ -0.28
CCDC187-201ENST00000563590 MORC4Q8TE76 937 aa13.33□□□□□ -0.28
CCDC187-201ENST00000563590 PPP1R13LQ8WUF5 828 aa13.33□□□□□ -0.28
CCDC187-201ENST00000563590 CRYGNQ8WXF5 182 aa13.33□□□□□ -0.28
CCDC187-201ENST00000563590 ERLEC1Q96DZ1 483 aa13.33□□□□□ -0.28
CCDC187-201ENST00000563590 MECRQ9BV79 373 aa13.33□□□□□ -0.28
CCDC187-201ENST00000563590 APOL6Q9BWW8 343 aa13.33□□□□□ -0.28
CCDC187-201ENST00000563590 STX18Q9P2W9 335 aaKnown RBP13.33□□□□□ -0.28
CCDC187-201ENST00000563590 ZNF212Q9UDV6 495 aa13.33□□□□□ -0.28
CCDC187-201ENST00000563590 E2F8A0AVK6 867 aa13.33□□□□□ -0.28
CCDC187-201ENST00000563590 C2CD2LO14523 706 aa13.33□□□□□ -0.28
CCDC187-201ENST00000563590 TBX3O15119 743 aa13.33□□□□□ -0.28
CCDC187-201ENST00000563590 TCEA3O75764 348 aa13.33□□□□□ -0.28
CCDC187-201ENST00000563590 OCRLQ01968 901 aa13.33□□□□□ -0.28
CCDC187-201ENST00000563590 HIC1Q14526 733 aa13.33□□□□□ -0.28
CCDC187-201ENST00000563590 HIF1AQ16665 826 aa13.33□□□□□ -0.28
CCDC187-201ENST00000563590 MOXD1Q6UVY6 613 aa13.33□□□□□ -0.28
CCDC187-201ENST00000563590 RBM44Q6ZP01 1051 aaKnown RBP13.33□□□□□ -0.28
CCDC187-201ENST00000563590 ZBTB33Q86T24 672 aa13.33□□□□□ -0.28
CCDC187-201ENST00000563590 RSPH3Q86UC2 560 aa13.33□□□□□ -0.28
CCDC187-201ENST00000563590 ZBTB46Q86UZ6 589 aa13.33□□□□□ -0.28
CCDC187-201ENST00000563590 PPP1R36Q96LQ0 422 aa13.33□□□□□ -0.28
CCDC187-201ENST00000563590 FAM20AQ96MK3 541 aa13.33□□□□□ -0.28
CCDC187-201ENST00000563590 NT5C1BQ96P26 610 aa13.33□□□□□ -0.28
CCDC187-201ENST00000563590 MIS12Q9H081 205 aa13.33□□□□□ -0.28
CCDC187-201ENST00000563590 GLT8D2Q9H1C3 349 aa13.33□□□□□ -0.28
CCDC187-201ENST00000563590 ZWILCHQ9H900 591 aa13.33□□□□□ -0.28
CCDC187-201ENST00000563590 NOCTQ9UK39 431 aaKnown RBP13.33□□□□□ -0.28
CCDC187-201ENST00000563590 PPM1HQ9ULR3 514 aa13.33□□□□□ -0.28
CCDC187-201ENST00000563590 NHSQ6T4R5 1651 aa13.32□□□□□ -0.28
CCDC187-201ENST00000563590 NFIBO00712 420 aa13.32□□□□□ -0.28
CCDC187-201ENST00000563590 COPEO14579 308 aa13.32□□□□□ -0.28
CCDC187-201ENST00000563590 MTA2O94776 668 aa13.32□□□□□ -0.28
CCDC187-201ENST00000563590 KRT19P08727 400 aa13.32□□□□□ -0.28
CCDC187-201ENST00000563590 FMO1Q01740 532 aa13.32□□□□□ -0.28
CCDC187-201ENST00000563590 SPP2Q13103 211 aa13.32□□□□□ -0.28
CCDC187-201ENST00000563590 AP3B2Q13367 1082 aa13.32□□□□□ -0.28
CCDC187-201ENST00000563590 TMCO4Q5TGY1 634 aa13.32□□□□□ -0.28
CCDC187-201ENST00000563590 ZCCHC23Q6ZST2 131 aa13.32□□□□□ -0.28
CCDC187-201ENST00000563590 TRIM42Q8IWZ5 723 aa13.32□□□□□ -0.28
CCDC187-201ENST00000563590 ICA1LQ8NDH6 482 aa13.32□□□□□ -0.28
CCDC187-201ENST00000563590 RBM15BQ8NDT2 890 aaKnown RBP13.32□□□□□ -0.28
CCDC187-201ENST00000563590 TTC16Q8NEE8 873 aa13.32□□□□□ -0.28
CCDC187-201ENST00000563590 SLCO2A1Q92959 643 aa13.32□□□□□ -0.28
CCDC187-201ENST00000563590 OXNAD1Q96HP4 312 aaPredicted RBP13.32□□□□□ -0.28
CCDC187-201ENST00000563590 POLR3CQ9BUI4 534 aaPredicted RBP13.32□□□□□ -0.28
CCDC187-201ENST00000563590 DNPEPQ9ULA0 475 aa13.32□□□□□ -0.28
CCDC187-201ENST00000563590 AK5Q9Y6K8 562 aa13.32□□□□□ -0.28
CCDC187-201ENST00000563590 TCEAL1Q15170 157 aa13.32□□□□□ -0.28
CCDC187-201ENST00000563590 LIN9Q5TKA1 542 aa13.32□□□□□ -0.28
CCDC187-201ENST00000563590 ARHGEF16Q5VV41 709 aa13.32□□□□□ -0.28
CCDC187-201ENST00000563590 RAPH1Q70E73 1250 aa13.32□□□□□ -0.28
CCDC187-201ENST00000563590 SAMD7Q7Z3H4 446 aa13.32□□□□□ -0.28
CCDC187-201ENST00000563590 FBXO27Q8NI29 283 aa13.32□□□□□ -0.28
CCDC187-201ENST00000563590 CCDC17Q96LX7 622 aa13.32□□□□□ -0.28
CCDC187-201ENST00000563590 PAFAH2Q99487 392 aa13.32□□□□□ -0.28
CCDC187-201ENST00000563590 TIPINQ9BVW5 301 aa13.32□□□□□ -0.28
CCDC187-201ENST00000563590 ZNF395Q9H8N7 513 aaPredicted RBP13.32□□□□□ -0.28
CCDC187-201ENST00000563590 KRT82Q9NSB4 513 aa13.32□□□□□ -0.28
CCDC187-201ENST00000563590 F5H423 210 aaPredicted RBP13.31□□□□□ -0.28
CCDC187-201ENST00000563590 RNASEH1O60930 286 aaKnown RBP13.31□□□□□ -0.28
CCDC187-201ENST00000563590 SLITRK3O94933 977 aa13.31□□□□□ -0.28
CCDC187-201ENST00000563590 CYP1A2P05177 515 aa13.31□□□□□ -0.28
CCDC187-201ENST00000563590 CD19P15391 556 aa13.31□□□□□ -0.28
CCDC187-201ENST00000563590 AQP5P55064 265 aa13.31□□□□□ -0.28
CCDC187-201ENST00000563590 CDC16Q13042 620 aa13.31□□□□□ -0.28
CCDC187-201ENST00000563590 NFIL3Q16649 462 aa13.31□□□□□ -0.28
CCDC187-201ENST00000563590 DLK2Q6UY11 383 aa13.31□□□□□ -0.28
CCDC187-201ENST00000563590 LDHDQ86WU2 507 aa13.31□□□□□ -0.28
CCDC187-201ENST00000563590 CEP170P1Q96L14 293 aa13.31□□□□□ -0.28
CCDC187-201ENST00000563590 SIKE1Q9BRV8 207 aa13.31□□□□□ -0.28
CCDC187-201ENST00000563590 PHACTR1Q9C0D0 580 aa13.31□□□□□ -0.28
CCDC187-201ENST00000563590 SAR1AQ9NR31 198 aa13.31□□□□□ -0.28
CCDC187-201ENST00000563590 GTF3C4Q9UKN8 822 aa13.31□□□□□ -0.28
CCDC187-201ENST00000563590 MTO1Q9Y2Z2 717 aaKnown RBP13.31□□□□□ -0.28
CCDC187-201ENST00000563590 RPS6KL1Q9Y6S9 549 aa13.31□□□□□ -0.28
CCDC187-201ENST00000563590 XPO1O14980 1071 aaKnown RBP13.31□□□□□ -0.28
CCDC187-201ENST00000563590 ZMPSTE24O75844 475 aa13.31□□□□□ -0.28
CCDC187-201ENST00000563590 RFX1P22670 979 aa13.31□□□□□ -0.28
CCDC187-201ENST00000563590 IGBP1P78318 339 aa13.31□□□□□ -0.28
CCDC187-201ENST00000563590 ZNF200P98182 395 aaPredicted RBP13.31□□□□□ -0.28
CCDC187-201ENST00000563590 MYBPC3Q14896 1274 aa13.31□□□□□ -0.28
CCDC187-201ENST00000563590 DACT2Q5SW24 774 aa13.31□□□□□ -0.28
Retrieved 100 of 20,778 RNA–protein pairs in 47.2 ms