RNA–Protein interactions for RNA: ENST00000563410.1

CHD9-208, Transcript of chromodomain helicase DNA binding protein 9, humanhuman

TSL 2

Gene CHD9, Length 488 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD9-208ENST00000563410 SOWAHAQ2M3V2 549 aa22.5■■□□□ 1.19
CHD9-208ENST00000563410 TRIM68Q6AZZ1 485 aa22.5■■□□□ 1.19
CHD9-208ENST00000563410 LAIR1Q6GTX8 287 aa22.5■■□□□ 1.19
CHD9-208ENST00000563410 LIMS2Q7Z4I7 341 aa22.5■■□□□ 1.19
CHD9-208ENST00000563410 MON1AQ86VX9 555 aa22.5■■□□□ 1.19
CHD9-208ENST00000563410 ADGRF2Q8IZF7 708 aa22.5■■□□□ 1.19
CHD9-208ENST00000563410 SYNPOQ8N3V7 929 aa22.5■■□□□ 1.19
CHD9-208ENST00000563410 OR5B17Q8NGF7 314 aa22.5■■□□□ 1.19
CHD9-208ENST00000563410 SPATA18Q8TC71 538 aa22.5■■□□□ 1.19
CHD9-208ENST00000563410 TNMDQ9H2S6 317 aa22.5■■□□□ 1.19
CHD9-208ENST00000563410 INTS13Q9NVM9 706 aa22.5■■□□□ 1.19
CHD9-208ENST00000563410 KBTBD4Q9NVX7 518 aa22.5■■□□□ 1.19
CHD9-208ENST00000563410 RAB23Q9ULC3 237 aa22.5■■□□□ 1.19
CHD9-208ENST00000563410 KIAA0391O15091 583 aaKnown RBP22.49■■□□□ 1.19
CHD9-208ENST00000563410 RPL10AP62906 217 aaKnown RBP22.49■■□□□ 1.19
CHD9-208ENST00000563410 SRSF5Q13243 272 aaKnown RBP22.49■■□□□ 1.19
CHD9-208ENST00000563410 RUNX3Q13761 415 aa22.49■■□□□ 1.19
CHD9-208ENST00000563410 STK38Q15208 465 aa22.49■■□□□ 1.19
CHD9-208ENST00000563410 PRR23BQ6ZRT6 265 aa22.49■■□□□ 1.19
CHD9-208ENST00000563410 LONP2Q86WA8 852 aa22.49■■□□□ 1.19
CHD9-208ENST00000563410 CBWD2Q8IUF1 395 aa22.49■■□□□ 1.19
CHD9-208ENST00000563410 MRPS31Q92665 395 aaKnown RBP22.49■■□□□ 1.19
CHD9-208ENST00000563410 TRMT2BQ96GJ1 504 aaKnown RBP22.49■■□□□ 1.19
CHD9-208ENST00000563410 ANKRD36BP1Q96IX9 119 aa22.49■■□□□ 1.19
CHD9-208ENST00000563410 MYRFLQ96LU7 910 aa22.49■■□□□ 1.19
CHD9-208ENST00000563410 EBF3Q9H4W6 596 aa22.49■■□□□ 1.19
CHD9-208ENST00000563410 KIF9Q9HAQ2 790 aa22.49■■□□□ 1.19
CHD9-208ENST00000563410 USP18Q9UMW8 372 aa22.49■■□□□ 1.19
CHD9-208ENST00000563410 KIAA1549LQ6ZVL6 1849 aa22.48■■□□□ 1.19
CHD9-208ENST00000563410 K7ELQ4 463 aaPredicted RBP22.48■■□□□ 1.19
CHD9-208ENST00000563410 SPTLC2O15270 562 aa22.48■■□□□ 1.19
CHD9-208ENST00000563410 LHX1P48742 406 aa22.48■■□□□ 1.19
CHD9-208ENST00000563410 ATXN1P54253 815 aaKnown RBP22.48■■□□□ 1.19
CHD9-208ENST00000563410 SIM2Q14190 667 aaPredicted RBP22.48■■□□□ 1.19
CHD9-208ENST00000563410 ZNF268Q14587 947 aaPredicted RBP22.48■■□□□ 1.19
CHD9-208ENST00000563410 CFAP221Q4G0U5 840 aa22.48■■□□□ 1.19
CHD9-208ENST00000563410 TMEM196Q5HYL7 178 aa22.48■■□□□ 1.19
CHD9-208ENST00000563410 PKN3Q6P5Z2 889 aa22.48■■□□□ 1.19
CHD9-208ENST00000563410 FAM171BQ6P995 826 aa22.48■■□□□ 1.19
CHD9-208ENST00000563410 KBTBD7Q8WVZ9 684 aa22.48■■□□□ 1.19
CHD9-208ENST00000563410 TRIM9Q9C026 710 aa22.48■■□□□ 1.19
CHD9-208ENST00000563410 UXTQ9UBK9 157 aaPredicted RBP22.48■■□□□ 1.19
CHD9-208ENST00000563410 ZNF233A6NK53 670 aa22.47■■□□□ 1.19
CHD9-208ENST00000563410 PRR5-ARHGAP8B1AHC4 643 aa22.47■■□□□ 1.19
CHD9-208ENST00000563410 PPP6R2O75170 966 aa22.47■■□□□ 1.19
CHD9-208ENST00000563410 RETP07949 1114 aa22.47■■□□□ 1.19
CHD9-208ENST00000563410 HOXA6P31267 233 aa22.47■■□□□ 1.19
CHD9-208ENST00000563410 CNR2P34972 360 aa22.47■■□□□ 1.19
CHD9-208ENST00000563410 ARHGAP8P85298 464 aa22.47■■□□□ 1.19
CHD9-208ENST00000563410 LMNB2Q03252 620 aa22.47■■□□□ 1.19
CHD9-208ENST00000563410 SPEM2Q0P670 501 aa22.47■■□□□ 1.19
CHD9-208ENST00000563410 HEATR6Q6AI08 1181 aaKnown RBP22.47■■□□□ 1.19
CHD9-208ENST00000563410 FSTL4Q6MZW2 842 aa22.47■■□□□ 1.19
CHD9-208ENST00000563410 DPH6Q7L8W6 267 aa22.47■■□□□ 1.19
CHD9-208ENST00000563410 FUBP3Q96I24 572 aaKnown RBP eCLIP22.47■■□□□ 1.19
CHD9-208ENST00000563410 HSPBP1Q9NZL4 362 aa22.47■■□□□ 1.19
CHD9-208ENST00000563410 TFIP11Q9UBB9 837 aaKnown RBP22.47■■□□□ 1.19
CHD9-208ENST00000563410 TRDMT1O14717 391 aaKnown RBP22.46■■□□□ 1.19
CHD9-208ENST00000563410 ATP2C2O75185 946 aa22.46■■□□□ 1.19
CHD9-208ENST00000563410 ARSAP15289 507 aa22.46■■□□□ 1.19
CHD9-208ENST00000563410 LMO2P25791 158 aa22.46■■□□□ 1.19
CHD9-208ENST00000563410 PCSK1P29120 753 aa22.46■■□□□ 1.19
CHD9-208ENST00000563410 MYO1EQ12965 1108 aa22.46■■□□□ 1.19
CHD9-208ENST00000563410 STXBP4Q6ZWJ1 553 aa22.46■■□□□ 1.19
CHD9-208ENST00000563410 EPM2AIP1Q7L775 607 aaPredicted RBP22.46■■□□□ 1.19
CHD9-208ENST00000563410 SPATA2LQ8IUW3 424 aaPredicted RBP22.46■■□□□ 1.19
CHD9-208ENST00000563410 ZNF507Q8TCN5 953 aa22.46■■□□□ 1.19
CHD9-208ENST00000563410 HPDLQ96IR7 371 aa22.46■■□□□ 1.19
CHD9-208ENST00000563410 SLC22A12Q96S37 553 aa22.46■■□□□ 1.19
CHD9-208ENST00000563410 BACH2Q9BYV9 841 aa22.46■■□□□ 1.19
CHD9-208ENST00000563410 LRRC27Q9C0I9 530 aa22.46■■□□□ 1.19
CHD9-208ENST00000563410 CUEDC2Q9H467 287 aa22.46■■□□□ 1.19
CHD9-208ENST00000563410 EIF3DO15371 548 aaKnown RBP eCLIP22.45■■□□□ 1.18
CHD9-208ENST00000563410 TNNC2P02585 160 aa22.45■■□□□ 1.18
CHD9-208ENST00000563410 SDHBP21912 280 aa22.45■■□□□ 1.18
CHD9-208ENST00000563410 SURF1Q15526 300 aa22.45■■□□□ 1.18
CHD9-208ENST00000563410 DUOXA2Q1HG44 320 aa22.45■■□□□ 1.18
CHD9-208ENST00000563410 CNNM4Q6P4Q7 775 aa22.45■■□□□ 1.18
CHD9-208ENST00000563410 SHC4Q6S5L8 630 aa22.45■■□□□ 1.18
CHD9-208ENST00000563410 WDR5BQ86VZ2 330 aa22.45■■□□□ 1.18
CHD9-208ENST00000563410 SCN4BQ8IWT1 228 aa22.45■■□□□ 1.18
CHD9-208ENST00000563410 CYP2S1Q96SQ9 504 aa22.45■■□□□ 1.18
CHD9-208ENST00000563410 SYT15Q9BQS2 421 aa22.45■■□□□ 1.18
CHD9-208ENST00000563410 FBRSL1Q9HCM7 1045 aaKnown RBP22.45■■□□□ 1.18
CHD9-208ENST00000563410 CRTAC1Q9NQ79 661 aa22.45■■□□□ 1.18
CHD9-208ENST00000563410 DYNC1LI1Q9Y6G9 523 aaKnown RBP22.45■■□□□ 1.18
CHD9-208ENST00000563410 TPRP12270 2363 aaKnown RBP22.45■■□□□ 1.18
CHD9-208ENST00000563410 TGFB1I1O43294 461 aa22.44■■□□□ 1.18
CHD9-208ENST00000563410 LRP3O75074 770 aa22.44■■□□□ 1.18
CHD9-208ENST00000563410 MAGEA11P43364 429 aa22.44■■□□□ 1.18
CHD9-208ENST00000563410 PSMC1P62191 440 aaKnown RBP22.44■■□□□ 1.18
CHD9-208ENST00000563410 FAM160A1Q05DH4 1040 aa22.44■■□□□ 1.18
CHD9-208ENST00000563410 ZNF77Q15935 545 aa22.44■■□□□ 1.18
CHD9-208ENST00000563410 WDR49Q8IV35 697 aa22.44■■□□□ 1.18
CHD9-208ENST00000563410 DHX58Q96C10 678 aa22.44■■□□□ 1.18
CHD9-208ENST00000563410 TRPC7Q9HCX4 862 aa22.44■■□□□ 1.18
CHD9-208ENST00000563410 GCNT4Q9P109 453 aa22.44■■□□□ 1.18
CHD9-208ENST00000563410 CDH9Q9ULB4 789 aa22.44■■□□□ 1.18
CHD9-208ENST00000563410 EGFP01133 1207 aa22.43■■□□□ 1.18
CHD9-208ENST00000563410 WARSP23381 471 aaKnown RBP22.43■■□□□ 1.18
Retrieved 100 of 20,778 RNA–protein pairs in 54.9 ms