RNA–Protein interactions for RNA: ENST00000563112.1

CLK3-210, Transcript of CDC like kinase 3, humanhuman

TSL 3

Gene CLK3, Length 665 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLK3-210ENST00000563112 FRMD5Q7Z6J6 570 aa18.02■□□□□ 0.48
CLK3-210ENST00000563112 OR6B3Q8NGW1 331 aa18.02■□□□□ 0.48
CLK3-210ENST00000563112 ZNF516Q92618 1163 aa18.02■□□□□ 0.48
CLK3-210ENST00000563112 RSPRY1Q96DX4 576 aa18.02■□□□□ 0.48
CLK3-210ENST00000563112 KCTD10Q9H3F6 313 aa18.02■□□□□ 0.48
CLK3-210ENST00000563112 DMAC2Q9NW81 257 aa18.02■□□□□ 0.48
CLK3-210ENST00000563112 SPATA6Q9NWH7 488 aaPredicted RBP18.02■□□□□ 0.48
CLK3-210ENST00000563112 THG1LQ9NWX6 298 aaKnown RBP18.02■□□□□ 0.48
CLK3-210ENST00000563112 PIAS3Q9Y6X2 628 aa18.02■□□□□ 0.48
CLK3-210ENST00000563112 GOLGA6L4A6NEF3 574 aa18.01■□□□□ 0.47
CLK3-210ENST00000563112 SLC38A8A6NNN8 435 aa18.01■□□□□ 0.47
CLK3-210ENST00000563112 LAMTOR5O43504 91 aa18.01■□□□□ 0.47
CLK3-210ENST00000563112 HCRTO43612 131 aa18.01■□□□□ 0.47
CLK3-210ENST00000563112 ATP2C2O75185 946 aa18.01■□□□□ 0.47
CLK3-210ENST00000563112 RHOBTB3O94955 611 aa18.01■□□□□ 0.47
CLK3-210ENST00000563112 STAU1O95793 577 aaKnown RBP18.01■□□□□ 0.47
CLK3-210ENST00000563112 NR3C1P04150 777 aa18.01■□□□□ 0.47
CLK3-210ENST00000563112 LMO2P25791 158 aa18.01■□□□□ 0.47
CLK3-210ENST00000563112 TARSP26639 723 aaKnown RBP18.01■□□□□ 0.47
CLK3-210ENST00000563112 MYL6P60660 151 aa18.01■□□□□ 0.47
CLK3-210ENST00000563112 PSMC1P62191 440 aaKnown RBP18.01■□□□□ 0.47
CLK3-210ENST00000563112 NUCB2P80303 420 aa18.01■□□□□ 0.47
CLK3-210ENST00000563112 SDHAF4Q5VUM1 108 aa18.01■□□□□ 0.47
CLK3-210ENST00000563112 C1orf228Q6PIY5 440 aa18.01■□□□□ 0.47
CLK3-210ENST00000563112 CELF5Q8N6W0 485 aaKnown RBP18.01■□□□□ 0.47
CLK3-210ENST00000563112 BPIFB1Q8TDL5 484 aa18.01■□□□□ 0.47
CLK3-210ENST00000563112 PARD3BQ8TEW8 1205 aa18.01■□□□□ 0.47
CLK3-210ENST00000563112 TMEM174Q8WUU8 243 aa18.01■□□□□ 0.47
CLK3-210ENST00000563112 FAM3CQ92520 227 aa18.01■□□□□ 0.47
CLK3-210ENST00000563112 NKD2Q969F2 451 aaPredicted RBP18.01■□□□□ 0.47
CLK3-210ENST00000563112 MSANTD3Q96H12 275 aa18.01■□□□□ 0.47
CLK3-210ENST00000563112 SLC46A2Q9BY10 475 aa18.01■□□□□ 0.47
CLK3-210ENST00000563112 FRMD4BQ9Y2L6 1034 aa18.01■□□□□ 0.47
CLK3-210ENST00000563112 RIF1Q5UIP0 2472 aaKnown RBP18.01■□□□□ 0.47
CLK3-210ENST00000563112 NUP210Q8TEM1 1887 aaPredicted RBP18.01■□□□□ 0.47
CLK3-210ENST00000563112 CACNA1IQ9P0X4 2223 aa18■□□□□ 0.47
CLK3-210ENST00000563112 NOL4O94818 638 aa18■□□□□ 0.47
CLK3-210ENST00000563112 ZNF202O95125 648 aa18■□□□□ 0.47
CLK3-210ENST00000563112 ANXA13P27216 316 aa18■□□□□ 0.47
CLK3-210ENST00000563112 RPS9P46781 194 aaKnown RBP18■□□□□ 0.47
CLK3-210ENST00000563112 CASP4P49662 377 aa18■□□□□ 0.47
CLK3-210ENST00000563112 KPNA1P52294 538 aaPredicted RBP18■□□□□ 0.47
CLK3-210ENST00000563112 MLLT6P55198 1093 aaPredicted RBP18■□□□□ 0.47
CLK3-210ENST00000563112 PLCB2Q00722 1185 aa18■□□□□ 0.47
CLK3-210ENST00000563112 CYP27A1Q02318 531 aa18■□□□□ 0.47
CLK3-210ENST00000563112 DPYDQ12882 1025 aa18■□□□□ 0.47
CLK3-210ENST00000563112 ZC3H14Q6PJT7 736 aaKnown RBP18■□□□□ 0.47
CLK3-210ENST00000563112 VSTM1Q6UX27 236 aa18■□□□□ 0.47
CLK3-210ENST00000563112 CMTM8Q8IZV2 173 aa18■□□□□ 0.47
CLK3-210ENST00000563112 MAB21L3Q8N8X9 362 aa18■□□□□ 0.47
CLK3-210ENST00000563112 MYLPFQ96A32 169 aa18■□□□□ 0.47
CLK3-210ENST00000563112 CLDN23Q96B33 292 aa18■□□□□ 0.47
CLK3-210ENST00000563112 TRMT2BQ96GJ1 504 aaKnown RBP18■□□□□ 0.47
CLK3-210ENST00000563112 MRPL45Q9BRJ2 306 aaKnown RBP18■□□□□ 0.47
CLK3-210ENST00000563112 GZF1Q9H116 711 aaPredicted RBP18■□□□□ 0.47
CLK3-210ENST00000563112 C8orf33Q9H7E9 229 aaPredicted RBP18■□□□□ 0.47
CLK3-210ENST00000563112 GDPD2Q9HCC8 539 aa18■□□□□ 0.47
CLK3-210ENST00000563112 CRTAC1Q9NQ79 661 aa18■□□□□ 0.47
CLK3-210ENST00000563112 NXF1Q9UBU9 619 aaKnown RBP18■□□□□ 0.47
CLK3-210ENST00000563112 NDRG2Q9UN36 371 aaKnown RBP18■□□□□ 0.47
CLK3-210ENST00000563112 TICRRQ7Z2Z1 1910 aa18■□□□□ 0.47
CLK3-210ENST00000563112 NCANO14594 1321 aa17.99■□□□□ 0.47
CLK3-210ENST00000563112 PTPRZ1P23471 2315 aaPredicted RBP17.99■□□□□ 0.47
CLK3-210ENST00000563112 LRRIQ3A6PVS8 624 aaPredicted RBP17.99■□□□□ 0.47
CLK3-210ENST00000563112 PRAMEF12O95522 483 aa17.99■□□□□ 0.47
CLK3-210ENST00000563112 PRR29P0C7W0 189 aa17.99■□□□□ 0.47
CLK3-210ENST00000563112 GRIK1P39086 918 aa17.99■□□□□ 0.47
CLK3-210ENST00000563112 KCNB1Q14721 858 aa17.99■□□□□ 0.47
CLK3-210ENST00000563112 CCDC142Q17RM4 750 aa17.99■□□□□ 0.47
CLK3-210ENST00000563112 ZNF699Q32M78 642 aa17.99■□□□□ 0.47
CLK3-210ENST00000563112 ZNF667Q5HYK9 610 aa17.99■□□□□ 0.47
CLK3-210ENST00000563112 CEP135Q66GS9 1140 aa17.99■□□□□ 0.47
CLK3-210ENST00000563112 TMEM150AQ86TG1 271 aa17.99■□□□□ 0.47
CLK3-210ENST00000563112 MON1AQ86VX9 555 aa17.99■□□□□ 0.47
CLK3-210ENST00000563112 STKLD1Q8NE28 680 aa17.99■□□□□ 0.47
CLK3-210ENST00000563112 MYCBPAPQ8TBZ2 947 aa17.99■□□□□ 0.47
CLK3-210ENST00000563112 PLEKHO2Q8TD55 490 aa17.99■□□□□ 0.47
CLK3-210ENST00000563112 TMC2Q8TDI7 906 aa17.99■□□□□ 0.47
CLK3-210ENST00000563112 MYRFLQ96LU7 910 aa17.99■□□□□ 0.47
CLK3-210ENST00000563112 CEP295NLQ96MC4 621 aa17.99■□□□□ 0.47
CLK3-210ENST00000563112 SEMA4AQ9H3S1 761 aa17.99■□□□□ 0.47
CLK3-210ENST00000563112 GOLPH3LQ9H4A5 285 aa17.99■□□□□ 0.47
CLK3-210ENST00000563112 EHD2Q9NZN4 543 aa17.99■□□□□ 0.47
CLK3-210ENST00000563112 TRAF3IP3Q9Y228 551 aa17.99■□□□□ 0.47
CLK3-210ENST00000563112 COL4A3Q01955 1670 aa17.99■□□□□ 0.47
CLK3-210ENST00000563112 A8MXQ7 604 aa17.98■□□□□ 0.47
CLK3-210ENST00000563112 ARNTLO00327 626 aa17.98■□□□□ 0.47
CLK3-210ENST00000563112 C4BPAP04003 597 aaKnown RBP17.98■□□□□ 0.47
CLK3-210ENST00000563112 SP9P0CG40 484 aa17.98■□□□□ 0.47
CLK3-210ENST00000563112 BDNFP23560 247 aa17.98■□□□□ 0.47
CLK3-210ENST00000563112 CCNE1P24864 410 aa17.98■□□□□ 0.47
CLK3-210ENST00000563112 RPL13P26373 211 aaKnown RBP17.98■□□□□ 0.47
CLK3-210ENST00000563112 CLDN10P78369 228 aa17.98■□□□□ 0.47
CLK3-210ENST00000563112 NCOA4Q13772 614 aa17.98■□□□□ 0.47
CLK3-210ENST00000563112 MDH1BQ5I0G3 518 aa17.98■□□□□ 0.47
CLK3-210ENST00000563112 TDRD10Q5VZ19 366 aaKnown RBP17.98■□□□□ 0.47
CLK3-210ENST00000563112 TXNDC8Q6A555 127 aa17.98■□□□□ 0.47
CLK3-210ENST00000563112 SPATA17Q96L03 361 aa17.98■□□□□ 0.47
CLK3-210ENST00000563112 SMG9Q9H0W8 520 aaKnown RBP17.98■□□□□ 0.47
CLK3-210ENST00000563112 XYLT2Q9H1B5 865 aa17.98■□□□□ 0.47
Retrieved 100 of 20,778 RNA–protein pairs in 42.1 ms